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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC55(2)
--------->
ANAC55(2)
<---------
ANAC46
<---------
ANAC55(1)
------>
MYB83
<----------
DOF2
------>
MYB46(1)
---------->
ID1
------>
ZmHOX2a(2)
---
--------->
AtMYB61
<---------
AHL20(2)
--------->
At4g35610
----
------->
GAMYB
<-----------
RAV1(1)
<-----------
GT1
<---------
ARR11(3)
----
--------->
MYB46(3)
<---------
GLK1(2)
--------->
ARR11(3)
<---
--------->
YAB1
<---------
MYB52(1)
<---------
YAB1
----------->
GT1
<---
cgaaactcataaccaccatccattatgtgttgtctagattatttttttttcgctttcaaatcgcatggttaaatatgatctgagtaaataccactgaaaa
27703300
--------->
AHL20(2)
<---------
AHL20(2)
------>
ZmHOX2a(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ARR11(3)
------>
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(1)
----->
ARR11(3)
--------->
AHL20(1)
--------->
ARR14(2)
<---------
AHL20(2)
----->
AHL20(1)
--------->
YAB1
<---------
ANAC58
<---------
AHL20(1)
<
------
AHL20(1)
<---------
ATHB12
<---------
ANAC58
<---------
ZAT18
--------->
ANAC55(2)
-
------
ARR11(3)
------>
ZmHOX2a(1)
<---------
YAB1
<---------
ARR14(2)
<---------
ANAC55(2)
<
atatttagaatgaaacatcctaatcatccacaaatttatttttgccttggtttcacatatactgtgcccaatctctaatacataatattttgatctgttt
27703400
---------->
DOF2
--------->
ANAC58
----------->
HVH21
--------->
DOF5.7(2)
<-------
MYC2
<-------
PIF4
------->
MYC2
------->
MYC3
<---------
ARR11(1)
<-------
MYC3
<---------
ARR11(3)
------->
PIF4
<---------
AGP1
------->
MYC4
--------->
ARR14(2)
<-------
MYC4
--------->
LBD16
<-------
PIF5
<---------
LBD16
<---------
ARR14(2)
------->
PIF5
<---------
YAB1
--------->
ARR14(2)
<---------
TGA1a
<---------
AHL20(2)
--------->
GLK1(1)
--------->
TGA1a
--------->
AHL20(1)
<---------
GLK1(1)
--------->
ANAC58
<---------
AHL20(1)
---------->
DOF2
--------->
AHL20(2)
--------->
ANAC58
<---------
ARR11(3)
------>
ZmHOX2a(2)
--------->
YAB1
<---------
ANAC55(2)
--------->
ARR11(3)
<------
ZmHOX2a(2)
<---------
AHL20(2)
<---------
DOF5.7(2)
---------
AHL20(2)
<---------
ARR14(2)
--------->
ANAC46
--------->
ANAC58
-------
-------->
AHL20(1)
<---------
ARR14(1)
<---------
ZAT6
--------->
ANAC58
--------->
ANAC55(2)
<---
---------
AHL20(1)
<---------
CCA1(2)
--------->
STY1(1)
--------->
ANAC58
======================
bZIP_DOF
aaaatattttcttattgtccggatctaaaagggtatccctagtgttgatataggccaaggcccatttatattctatagcacgtgaacgcccaaagttagt
27703500
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ATHB51
<---------
ARR14(2)
<---------
ICU4
<---------
WRKY12
<---------
AHL20(1)
<---------
WRKY38(1)
--------->
AHL20(2)
<---------
WRKY45
<--------
ATHB1
<------
MYB46(1)
--------->
YAB1
<---------
ANAC55(2)
<---------
ARR14(2)
--------->
ICU4
<-----
<---------
ATHB12
--------->
ARR14(2)
<---------
ATHB12
--------->
LBD16
<---------
ALFIN1
<------
MYB83
<----------
DOF2
<---------
YAB1
-->
MYB52(2)
<---------
ATHB12
--------->
AtMYB61
--------->
MYB59
------>
ZmHOX2a(1)
------
------
MYB46(3)
--------->
RAP2.6(2)
--------->
ANAC46
--------->
WRKY18(1)
<---------
ATHB51
ggttcacaaatcacaaatcaaaccgcaaatcatgtaaaccacacatcaaaccgatttggtcaacaatatcctttctcttcccaataatttttgactcatc
27703600
<-------
--------
<--------
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
--------->
ANAC58
<---------
AHL20(1)
<------
MYB83
--------->
ANAC46
<---------
AHL20(2)
<------
MYB46(1)
--------->
ANAC58
--------->
AHL20(2)
--------->
MYB59
--------->
ANAC58
--------->
AHL20(1)
--------->
ATHB51
<---------------
AtSPL8
<---------
ATHB12
<---------
AHL20(2)
----------->
RAV1(2)
--------->
TOE2(3)
---------->
DOF2
----
At4g35610
<---------
CCA1(2)
<-------
TEIL
--------->
ANAC58
------------>
CBF
--
--->
At4g35610
<---------
ZAT18
<----------
DOF2
<---------------
AtSPL3
--------->
AHL20(2)
agagaataatttggtcttcgtctctgcgcgcgtctctgtctgtctctttcagattcaactggagcaagtacgaaacataaatatcaataaattaaaggaa
27703700
--------->
AHL20(2)
--------->
ZAT6
--------->
YAB1
<-----
--------->
MYB52(1)
--------->
AHL20(2)
--------->
ATHB12
---
ID1
--------->
At4g35610
--------->
ALFIN1
--->
GT1
<---------
LBD16
<---------
AHL20(2)
--------->
DAG2
--------
-
TOE2(3)
*
TSS
<---------
LBD16
<---------
ATHB51
<---------
TOE2(3)
--
------->
AHL20(2)
>>>>>>>>>
TBF1
------>
ZmHOX2a(1)
--------->
MYB52(1)
--------->
ICU4
aaaaaataac
agtagagaagaagaacatgttttcaactcctcgggagcaaaaaaaataattcagcaagagaaacggcgaataaggtggaaatgatttgac
27703800
--------->
YAB1
<---------
YAB1
--------->
WOX13(1)
--------->
YAB1
<---------
MYB46(3)
<---------
ICU4
--------->
ALFIN1
<---------
YAB1
<---------
DEAR3(1)
<---------
AHL20(1)
<---------
AtMYB61
<---------
AHL20(2)
<------
MYB46(1)
--------->
AHL20(2)
<---------
MYB46(3)
--------->
ARR14(2)
<------
MYB83
---
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ALFIN1
<--------
<---------
ARR14(2)
--------->
GLK1(2)
<-----------
GT1
<---------
DEAR3(1)
---------
----
TOE2(3)
----------->
GT1
--------->
AHL20(1)
<---------
AtMYB61
---------
--->
HVH21
----------->
GT1
----------->
GT1
<---------
MYB46(3)
---------
--------->
ARR10
----------->
GT1
<---------
ARR11(3)
<---------
ATHB12
<------
NtERF2
<-----
gaagaaacgcttggctgagagtaaaatcggaaaaacaaaatctgtaatttattattatcagcctctaaatca
atgggtggtggtggcaatctcgtcgacg
27703900
<---------
MYB52(1)
<---------
MYB52(1)
<-------
GAMYB
<---------
MYB55(2)
<---------
MYB46(3)
<---------
ICU4
<---------
ALFIN1
------>
ALFIN1
<<<<<<<<<
TBF1
<------
ZmHOX2a(2)
--------->
MYB46(3)
-
DEAR3(1)
<<<<<<<<<
TBF1
--------->
YAB1
--------->
ANAC46
>
DEAR3(1)
<----------
DOF2
<<<<<<<<<
TBF1
--------->
YAB1
--------->
ARR14(2)
-
-->
HVH21
<---------
ANAC58
<<<<<<<<<
TBF1
--------->
ICU4
<-------
TEIL
------>
NtERF2
---
>
ETT(2)
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ATHB12
<---------
ARR14(2)
----
----
DEAR3(1)
=====================================
HOX2a_HOX2a
<---------
ALFIN1
------
gtgttcgtcgttggcttttctttcaacgtcgtccttcttcttcttcttcttccaataatcacgatcagattcaaaatccccccaccgtttctaatcccaa
27704000
--------->
CCA1(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ARR11(3)
------->
GAMYB
<---------
ARR14(2)
------>
ZmHOX2a(2)
--------->
ANAC58
<--------
----------->
ARR10
<------
ZmHOX2a(2)
--------->
ANAC58
---------
------>
NtERF2
<---------
ARR14(2)
<---------
At4g35610
<--------
-------->
DEAR3(1)
--------->
ARR14(2)
--------->
At4g35610
-----------
---->
GAMYB
--------->
HSFC1(2)
<-------
TEIL
<-------
TEIL
----->
MYB46(3)
--------->
At4g35610
<---------
TOE1(3)
<--------
P
--->
MYB52(1)
<---------
HSFC1(2)
<---------
TOE2(3)
-------->
P
----------->
GT1
cgacgacgaagatttgaagaagcttaccgatccgtctaagctaagacagattaaggttcagcaacgaaatcacttacctatggagaagaag
gtagatttt
27704100
--------->
YAB1
<---------
YAB1
------>
MYB46(1)
----------------->
AGL1
<---------
ICU4
------>
MYB83
<-----------------
AGL3
--------->
YAB1
<---------
MYB59
<--------
-
ARR11(3)
--------->
HSFB2a(2)
--------->
ARR11(3)
<---------
ANAC55(2)
>
ARR11(3)
<---------
ARR11(3)
<---------
HSFB2a(2)
--------->
GLK1(2)
--------->
ANAC55(2)
--------
-
GLK1(2)
--------->
ARR11(3)
--------->
LBD16
--------->
AHL20(2)
--------->
LBD16
<---------
REM1(2)
>
ARR10
<---------
YAB1
<-------
TEIL
--------->
ARR11(3)
<---------
LBD16
--------->
GLK1(1)
gtttccaattttgatatctagatttgattcattccgagaaaaatcatgaataaaatctagcaatttctcag
ggaatacctaatgctgaattcttcacgga
27704200
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AGI:
At1g73670.1
Description:
ATMPK15 (ARABIDOPSIS THALIANA MAP KINASE 15); MAP kinase/ kinase. Identical to Mitogen-activated protein kinase 15 (MPK15) [Arabidopsis Thaliana] (GB:Q9C9U4;GB:Q94EY5); similar to ATMPK8 (ARABIDOPSIS THALIANA MAP KINASE 8), MAP kinase [Arabidopsis thaliana] (TAIR:AT1G18150.2); similar to MPK9 (MAP KINASE 9), MAP kinase [Arabidopsis thaliana] (TAIR:AT3G18040.1); similar to ATMPK8 (ARABIDOPSIS THALIANA MAP KINASE 8), MAP kinase [Arabidopsis thaliana] (TAIR:AT1G18150.1); similar to double HA-tagged mitogen activated protein kinase 15 [synthetic construct] (GB:ABG54342.1); similar to double HA-tagged mitogen activated protein kinase 8 [synthetic
Range:
from: 27703711
to: 27707101
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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