Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                                     <------                                    <---------AHL20(2)                                     <---------AHL20(2)                                   --------->AHL20(2)                                  <---------AHL20(2)                              --------->TOE2(3)                                        --------->AHL20(2)                              --------->YAB1                                          <---------AHL20(1)                            ------->TEIL  <---------YAB1                              --------->AHL20(1)          ---------->DOF2  <---------CCA1(2)                         <----------DOF2  <---------AHL20(2)  ---------->DOF2  --------->TOE2(3)<---------ICU4               <-----------GT1      --------->AHL20(2)   gattaaaagagagaaaggaaaacttaattgtatcttaataaatatttattgtaagtttttttttttttttcctttgttttgtctaaaatttattttaagt  27673900                                                     --------->ANAC58                                                     --------->ANAC58   <---------ANAC58                                           ----------->GT1            <---------At5g28300                                       >>>>>>>>>>AGL22               <<<<<<<<<GT-2                                       >>>>>>>>>>AGL20            <---------ICU4                                       >>>>>>>>>>AGL24            --------->ATHB51                                    --------------->AGL15         <--------HAHB4             --------                                   ----------------->AGL2        <---------YAB1    --------->ANAC46                                   <-----------------AGL2        --------->ICU4    --------->ANAC58                                   <-----------------AGL3      --------->YAB1      --------->ANAC58--                                   <-----------------AGL1     <---------ATHB12   <---------ALFIN1  --                                   <-----------------AG       <---------YAB1 <---------PCF2  --------                                   ----------------->AGL3    ------>MYB83 --------->ALFIN1  ---------                 --------->HSFB2a(2)<---------------AGL15    ------>MYB46(1)----------->HVH21<-------                 <---------HSFB2a(2)------>ZmHOX2a(1)--------->ANAC46<-----------GT1        <--------   <---------ANAC46              ------>NtERF2       --------->ANAC55(2)<---------ANAC46  --------->YAB1 ---TOE2(3)  <----------DOF2    --------->DEAR3(1)   <---------ANAC55(2)<---------ANAC58 --------->AHL20(2)   ttgtaacgtcgaaaactttatagaagtaatttcgcctcctaaatatggaaaaaatacgaaacctatcataattaccgtgggacacactccattaataatg  27674000                                        <---------ANAC58   --------->ANAC58                     --------->bZIP60(1)   --------->ANAC58                     <---------ANAC55(2)   --------->ANAC46                     <---------ANAC58 ->YAB1                                 --------->ANAC46                                           <- ------->MYB46(3)                       <---------bZIP60(1)                                        <- ------->DEAR3(2)                       --------->ANAC55(2)        ------->GAMYB                   <- >HAHB4                            <------------CBF   ----------->ARR10   <---------MYB52(2)       -- >ICU4<---------GLK1(1)<------------CBF<---------TOE2(3)<---------GLK1(2) --------->MYB46(3)     ---- --ICU4    --------->MYB52(1)  <-------MYC3  <----------ID1     --------->MYB52(1)             <----- -ATHB51  ----------->HVH21    ------->MYC3--------->MYB52(1)  ------>ZmHOX2a(1) --------->LBD16-----   aacagacgaaatctgacggtgtatgaattgccatgtgtattgacgtaacgacaaattagattctcctaacggtctaacaaacccccagtatttgaatccc  27674100      ---------->DOF2 --------TCP16(1) --------ARR14(2) --------TCP20                            ------->GAMYB ------->ARR14(2)                   --------->YAB1 ----->LBD16        ------->GAMYB <---------WOX13(1) ----LBD16<---------GLK1(2)      <------------CBF ---->LBD16--------->GLK1(2)<-----------GT1      ----------->GT1----------------->AGL1              <   ggttccactaaagaatcggtaaccgaatataaaccgattgataaccgaaaaatgaaaaacatgtaaaccgaaatcggaagcgcttcgtcttctcaaaata  27674200                                                                               <---------At4g35610                                                                             --------->ZAT14                                                                             --------->ZAT18                                                                     ------>ZmHOX2a(2)                                                                    --------->At4g35610                                                                    <------ZmHOX2a(2)                                                                    <---------At4g35610                                                                    --------->GLK1(1)                                                                    <---------GLK1(1)                                                                   --------->ARR11(3)                              --------->ZAT14               <---------ARR14(2) --------->At4g35610   <------NtERF2              <---------ZAT14               --------->ARR14(2)--------->ALFIN1  <---------ORA47(2)          <---------ZAT18          --------->GLK1(2)     <---------ZAT14 <---------DEAR3(1)    <---------At4g35610   <------ZmHOX2a(2)     <---------ARR11(3)              <- --------->ETT(1)      <---------ZAT2       <---------ARR14(2)     <---------ARR14(2)              <- ---------ORA47(1)     --------->At4g35610  --------->ARR11(3)     --------->ARR14(2)  *TSS      <---   tggtcggcgaagaagatagcgagagagctcagtccagtaagatggagatcgagcgagaatcgaatttgggatctgcgagtgtgctgatgcagtcgaaggg  27674300                                  <------ZmHOX2a(2)                                  --------->CCA1(2)                                  ==========================HOX2a_HOX2a                                 --------->ARR11(3)                                 <---------ARR14(2)                                 <---------ARR11(3)    <------ZmHOX2a(2)                                 --------->AGP1        <---------YAB1                                 --------->ARR14(2)   <---------ARR11(3)                              --------->HSFB2a(2)     --------->ARR11(3)                         <----------DOF2  --------->ANAC58                         <---------DAG2   --------->ANAC58                                --------->At4g35610                     <------ZmHOX2a(1) --------->ARR14(2)                                 <---------At4g35610 -----MYB46(1)       ====================HOX2a_HOX2a <------ZmHOX2a(1)             <---------At5g28300 -----MYB83       <---------HSFB2a(2)  <---------GLK1(2)--------->YAB1            <-----------GT1 <-- -----P   <-----------HVH21   <---------HSFB2a(2)  <---------TOE1(2)         <----------DOF2      ---   taggcttcacaacttcaggtcgaggagcttttcgagatccagactcgctatcgaaggatcatagccaatagccatagctctttgttacagtcatctccgt  27674400                                                                                          <---------SPL7                                                                                         <---------ANAC46                                                                                      <---------ANAC58                --------->YAB1                                 ------>ZmHOX2a(1)      <---------ANAC58 -------HSFB2a(2)                                  <----------DOF2               <---------ICU4 ------>HSFB2a(2)                 --------->O2 <---------CCA1(2)              --------->YAB1   ctcgaatttcttctctattcatagatttcattaccctcgtgaaaaaatcgtctcttttttgtttcctagtgtgttctcaaggataatggcttcgtatggt  27674500                                                                                          <---------AHL20(2)                                                                 <---------TOE2(3)        --------->AHL20(2)                                                                 <---------TOE1(3)     <---------ARR14(2)                                                             <----------DOF2       <---------ZAT18                                                         <---------GLK1(2)         --------->ZAT18                                  --------->ANAC58       --------->ARR14(2)        --------->ZAT14                                  --------->ANAC58      <------ZmHOX2a(1)          <---------ZAT14          <---------ANAC46   <---------ANAC46          <---------YAB1        <---------REM1(1)   gagtgactagtttcttatacaacgttttctggtgtgaagcaatatggacactgtgttaggattctttaaggcttcgatgatgtagtgcagatttaaaaat  27674600                       <---------WOX13(1)                      >>>>>>>>>GATA-3                      >>>>>>>>>GATA-2               <---------ANAC46               <---------ANAC58               <---------ANAC58                                                                   <--            --------->DAG2                             <---------AHL20(2)                         ---           ---------->DOF2                            --------->AHL20(2)                       <-----        --------->TOE1(3)                             <---------AHL20(2)                     --------        --------->YAB1>>>>>>>>>GATA-1                <---------WOX13(1)           <---------MYB46(3)        --------->TOE2(3)--------->ATHB12          --------->ATHB12               --------->ATHB12<--   <---------DAG2--------->ALFIN1              --------->ATHB12        ------->TEIL    <-----------RAV1(2)   <----------DOF2    >>>>>>>>>GATA-4      ----------->GT1  <---------YAB1    <---------AHL20(2)  <--   tgggactttaccataaagcgtgtggattgatttgatattggtaatgggtttattgatttattttgatgaattgaatctttttaatggttgcaggcgagga  27674700   --------->GLK1(1)                                     --------->YAB1 -------ANAC58        ---------->DOF2                   <---------YAB1      --------->At4g35610 -------->GT1      --------->HSFB2a(2)          <---------REM1(1)        <---------HSFC1(2) -ZmHOX2a(1) <---------ICU4                  <---------ZAT6           ---------->DOF2 ->ALFIN1---------->DOF2                   <---------ANAC58  <---------ANAC58           ---------->DOF2 -------ANAC46     <---------HSFB2a(2)     <---------ANAC58  <---------ANAC58 ----------->HVH21  <--- -------ANAC58     --------------->AGL15   <---------ANAC46<---------YAB1--------->HSFC1(2)      ----   gcgtgaaatccaaaagaattactggaaagagcattcagtgggattgagtgttgaagctatgatgcttgattccaaagcttctgacctcgacaaagaagaa  27674800  Previous    Next  AGI:  At1g73600.1    Description:  phosphoethanolamine N-methyltransferase. Identical to Putative phosphoethanolamine N-methyltransferase 3 (NMT3) [Arabidopsis Thaliana] (GB:Q9C6B9;GB:Q9C9V1); similar to NMT1 (N-METHYLTRANSFERASE 1), phosphoethanolamine N-methyltransferase [Arabidopsis thaliana] (TAIR:AT3G18000.1); similar to phosphoethanolamine N-methyltransferase 2, putative (NMT2) [Arabidopsis thaliana] (TAIR:AT1G48600.1); similar to phosphoethanolamine N-methyltransferase 2, putative (NMT2) [Arabidopsis thaliana] (TAIR:AT1G48600.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN64744.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68187.1); simila Range:  from: 27674287    to: 27677233    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g73602.1    Description:  CPuORF32 (Conserved peptide upstream open reading frame 32) Range:  from: 27674287    to: 27677230    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version