Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ZAT14                         <---------ICU4                        --------->ICU4                      <--------ATHB1                      <---------ICU4                      --------->ATHB12                      <--------HAHB4                      --------->ATHB51                      --------->YAB1                     --------->ICU4                     <---------ATHB51                     <---------YAB1                     --------->AHL20(2)                   --------->YAB1                  <---------AHL20(2)                  --------->AHL20(2)                 --------->AHL20(1)                 --------->AHL20(2)              <---------AHL20(2)                                            --------->DAG2            --------->AHL20(2)                                            ---------->DOF2            <---------AHL20(2)                                     <---------ICU4        --------->AHL20(2) <---------YAB1                          --------->ATHB51   --------->At5g28300-------->HAHB4                       --------->AHL20(2)<----------ID1      ----  ----------->GT1<---------AHL20(2)----------->GT1------->GAMYB --------->YAB1          ---------->DOF2   aacatggtaaaaatataaatttaataattagtataggggataaattgatcaaccgaatagattaattcataatttgaaaaggccaaaaaaaaaagagaga  27662900                                                                                       --------->AtMYB61                                                                                      <---------MYB55(2)                                                                                      --------->MYB46(3)                                                                                    --------->WOX13(1)                                                                                   --------->MYB46(3)                                                                                  <---------ATHB12                                                                               --------->MYB46(3)                                                                              --------->ANAC58                                             <------NtERF2                    --------->ANAC58                                            ------>NtERF2                   <---------ALFIN1                                            <------NtERF2                  --------->MYB46(3)                           <---------------------WRI1   --------->ARR14(2)--------->ANAC46                           --------->LBD16 --------->DEAR3(1)             --------->ANAC58                          --------->ANAC46 --------->RAP2.6(2)            --------->ANAC58                         <---------LBD16  <---------RAP2.6(2) ---------->DOF2------->TEIL          <-           <---------ARR14(2)     <---------ZAT18   --------->ZAT6      <---------ALFIN1      -------           --------->ARR14(2)---------->DOF2<---------ATERF1(1)        --------->ANAC46------->GAMYB ------->GT1     <----------DOF2  --------->ZAT18<----------DOF2     <---------ALFIN1-------->P<-----   ggcaaaaacagaggctctgctttggactccgcaaagcgcacaaggccgcctctttcactatccccaaagctccaccacgcacccatcaaccaccattttt  27663000                                                                       <---------YAB1                                                      --------->TGA2(1)<-----------RAV1(1)                                              --------->YAB1 --------->ANAC58      <---------YAB1                         <---------ATHB12<---------ALFIN1 <---------ANAC58                  <---------ANAC46   <---------bZIP60(1) <---------ANAC58                  <---------ANAC58   --------->bZIP60(1) ----------GT1                     <---------ANAC58 <-----------GT1  --------->YAB1 <-----------GT1 - -->AHL20(2)                      ---------->ID1 <---------ICU4--------->ANAC46----------->GT1 ------ ----YAB1 <-----------GT1   <----------DOF2--------->WOX13(1)--------->ANAC58  --------->ICU4  <-----   atttcgtttttattacattcaaaaaaacttctttttgtcgtatttcaatcaaaattacatcacacacactattatgttggaatgtttaacaaaacaaata  27663100                                                                                  -------->P                                               <---------ANAC55(2)               --------->MYB52(1)                                               --------->ANAC58                <---------MYB52(2)                                               --------->ANAC58          <---------HSFB2a(2)                                               --------->ANAC46       <---------ARR11(3)                                               --------->ANAC55(2)    --------->ARR11(3)                                               --------->ANAC55(1)   --------->CCA1(1)       <---------At4g35610  <---------TOE2(3)<---------ALFIN1    <---------AHL20(1)     <---------AHL20(2) -------->ARR11(3)        <---------AHL20(2)<---------REM1(2)    --------->AHL20(2)   ------>MYB83 --->AHL20(2)            --------->AHL20(2)------>ZmHOX2a(1)     --------->AHL20(1)   ------>MYB46(1) ----AHL20(2)       <-----------GT1  <-----------GT1     <----------DOF2 --------->HSFB2a(2)      ---   aatatgttgagctattccaattttacatttaatgtttttttactcctacacgtaaactacttttgaatataatatctagaaactaaccaaataatcgaaa  27663200                                                           --------->AHL20(2)                                                           <---------AHL20(2)                  ------                                                       --------->AHL20(2)                      ------               <---------At4g35610             <---------AHL20(2)                              <-----        <---------AHL20(2)                   --------->AHL20(2)                    ------->GAMYB        --------->AHL20(2)                   ----------->TBP                      --------->MYB46(3)     --------->YAB1              --------->TOE2(3)     <---------AHL20(2)        <---------At4g35610   --------->AHL20(2)          <-------TEIL --------->AHL20(1)                   --------->At4g35610  --------->YAB1  --------->MYB52(1)        <---------AHL20(1)                  --------->MYB52(1) -- -------->GT1  --------->At4g35610         --------->AHL20(2)        ----------->GT1      --------->AHL20(2)   acgaaaataataaaatcagcaaacagttttagcttcattaacaaaatatatatatgtttaattaaaaaatatggtattttctcaacggacaaaaaaataa  27663300                                                   <-----------GT1                                                   ---------->ID1            <---------AHL20(2)           <-----------GT1          ----------->TBP               <---------ZAT14  ---------->DOF2                       --------->ZAT14 --->AHL20(1)                          <----------DOF2                                    --------->ARR11(3) --->AHL20(2)                     *TSS <---------DAG2      <-----------GT1                <---------ARR11(3) ----AHL20(2)                   --------->ZAT6    <-----------GT1 --------->ZAT14     ---------->DOF2 ------->AHL20(2)              --------->ZAT14<----------DOF2 <---------ALFIN1 ---------->DOF2   aataaaaagaatataaaaatgtggtctcttctcaacactcactttactcttttttccctcttcaccacttctctctcaaactaaagacaaaagctcttct  27663400                                           <---------ZAT18                                          <---------ANAC46                                         --------->ATERF1(1)                                         <---------At4g35610                                         --------->At4g35610                                         <------NtERF2                                        <---------RAP2.6(1)                                        <---------RAP2.3(1)                                        <---------ORA47(2)                                        <---------ATERF1(1)                                        <---------DEAR4(2)                                        <---------RRTF1(1)                                        ------>NtERF2                                       <---------RAP2.6(2)                                       --------->DEAR3(1)                                       <---------DEAR3(1)                                       <---------RAP2.3(2)                                       <---------ATERF1(2)                                       <---------RRTF1(2)                                       <---------DREB2C(2)                                       <---------RAP2.3(3)                                       <---------RRTF1(3)                                   <--------                                      <---------ABI4(1)                     <-------GAMYB -----------                                      --------->ATERF1(1)                  <---------ANAC58 ---------                                     <---------RAP2.3(1)        ------>NtERF2        ------->TEIL                                    <---------RAP2.3(2)        <---------RAP2.6(2)--------->ANAC46                                    <---------RRTF1(3)         <---------ANAC46   <---------ANAC55(2)                                    <---------RRTF1(2)        --------->RAP2.6(3) --------->ANAC55(2)                               <---------ICU4          --------->ANAC58    --------->ANAC55(2)                               --------->ATHB12      <---------ALFIN1----------------------->TaNAC69(2)                         ---------->DOF2<---------ERF1 --------->ANAC58 <---------ARR14(2)-----------                 --------->LBD16    <---------RAP2.6(2)--------->ANAC46 --------->ARR14(2)<---------YAB1                 ------>NtERF2<---------YAB1<------NtERF2   ----------->HVH21<---------MYB52(1) -----                <---------DEAR3(1) <---------At5g28300 --------->bZIP60(2) <---------ANAC55(2)------>ZmHOX2a(2)               <---------LBD16--------->ICU4------>NtERF2   <---------YAB1 <---------ANAC58--------->YAB1   ctcttccctctctcttctccggcgaacaaaagatgattacggcggcggacttctaccacgttatgacggctatggttccgttatacgtagctatgatcct  27663500                         --------->ARR14(3)                         --------->ARR11(3)                         --------->GLK1(2)  --------->SPL7         --------->ARR14(2)                                              ------>ZmHOX2a(1) --------->MYB52(1)      <---------ARR14(2)                                         ------>ZmHOX2a(1) -ARR11(3)               <-----------ARR10                       ---------->ID1 --------->ARR14(2) >ARR10                  <---------ARR14(3)      ------>NtERF2 <---------ANAC58 <---------ARR14(2) >ARR11(3)<-----------HVH21             --------->AtMYB61   <---------MYB52(1)--------->DEAR3(1)   -- ------------>TaNAC69(2) <---------ARR11(3)    <---------LBD16 <---------ANAC58 <---------MYB52(1) -- ->ZmHOX2a(1)    ----------->GT1--------->ANAC46 --------->LBD16--------------------->WRI1   <-------   cgcttacggctctgtcaaatggtggaaaatcttcacaccagaccaatgctccggcataaaccgtttcgtcgctctcttcgccgttcctctcctctctttc  27663600                                                     --------->GLK1(2)                                                    <---------GLK1(2)                       --------->ANAC58          <------NtERF2                       --------->ANAC46         <---------At4g35610                -------->P                      --------->LBD16              <---------MYB111(2)               <------NtERF2              <---------MYB111(1)               ------>NtERF2              <---------MYB55(2)               --------->DEAR3(1)              --------->MYB46(3)              --------->RAP2.3(1)          <---------MYB52(2)                --------->ANAC46         <---------At4g35610                <---------DEAR3(1)         ------>NtERF2--------->SPL7   --------->ARR14(2)      ---------->DOF2         --------->At4g35610     --------->TOE1(2)  --------->ARR14(2)       --------->RAP2.3(1)       --------->TOE2(2)  <---------ARR14(2)     --------->DEAR3(1)--------->ANAC58<---------ARR14(2)    --------->LBD16               ------>ZmHOX2a(1) ------->ANAC46------->GAMYB    --------->MYB46(3)----------->ARR10         ------>ZmHOX2a(1)<------- ------->bZIP60(2)  <---------MYB52(1)<---------MYB52(1)    --------->HSFB2a(2)            ---------- ---DOF2--------->DEAR3(1)     ------->TEIL------>ZmHOX2a(1)<---------HSFB2a(2)      ------>ZmHOX2a(1)   cacttcatcgccgctaacaacccttacgccatgaacctccgtttcctcgccgcagattctctccagaaagtcattgtcctctctctcctcttcctctggt  27663700         --------->LBD16        --------->RAP2.6(2)        --------->ANAC46        --------->RAP2.3(2)        --------->RRTF1(2)                                      <---------ALFIN1        --------->ANAC58                                      ----------->RAV1(1)        --------->ANAC58                                      <---------ALFIN1              ---------       --------->RAP2.3(1)                                   --------->ANAC46             --------->HSFB2a(2)      <---------At4g35610                                   --------->LBD16      --------->GLK1(1)      --------->At4g35610                               --------->ANAC58         <---------GLK1(1)      --------->ZAT2   <<<<<<<<<RAP2.2                  --------->ANAC58        --------->ARR14(2) ----RAV1(1)       <----------DOF2                    <---------ALFIN1          <---------ARR14(2) ->RAV1(2) --------->MYB52(1)                      <---------ETT(2) --------->ZAT14       <---------HSFB2a(2)   gcaaactcagccgcaacggttctttagattggaccataactctcttctctctctcgacactccccaacactctagtcatggggatacctcttctcaaagg  27663800  Previous    Next  AGI:  At1g73590.1    Description:  PIN1 (PIN-FORMED 1); transporter. Identical to Auxin efflux carrier component 1 (PIN1) [Arabidopsis Thaliana] (GB:Q9C6B8;GB:Q9ZSY5;GB:Q9ZSY6); similar to PIN3 (PIN-FORMED 3), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G70940.1); similar to PIN4 (PIN-FORMED 4), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT2G01420.1); similar to PIN7 (PIN-FORMED 7), auxin:hydrogen symporter/ transporter [Arabidopsis thaliana] (TAIR:AT1G23080.1); similar to auxin efflux carrier [Momordica charantia] (GB:AAQ14257.1); similar to PIN1-like auxin transport protein [Cucumis sativus] (GB:BAC41319.1); similar to AEC1 Range:  from: 27663334    to: 27666839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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