Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ATERF1(1)                                       --------->ZAT2                                       <---------ZAT2                                    ------->GAMYB                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC46                                <---------WRKY38(1)                              --------->ANAC58       <-------TEIL           --------->ANAC46 ------MYB83                  --------->ANAC58 ---------->GT1           <-----------HVH21 ------MYB46(1)         --------->ZAT2 <---------At4g35610                                  <-------- ------->MYB59          <---------ZAT2 --------->At4g35610                               <---------ARR14(2) ------->MYB46(2)       --------->At4g35610           <-------TEIL                    <---------ANAC46 ------->MYB111(1)      <---------At4g35610        --------->HSFC1(2)  --------->TOE2(3)<---------CCA1(2) ------P               <---------TOE1(2)<-----------RAV1(2) <---------TOE2(3)  --------->YAB1 -----ANAC46 --------->ZAT6 <-----------RAV1(2)    <---------HSFC1(2) --------->YAB1  ----------->GT1   gtaggtaaatgcataccactagtcgcagcttcaggcaacgcagcaggcgaagaagcttcattaagaaaacaaacatcaatatcagaacgcgtatataatc  27651800                                                                                            <--------                                                                                            <--------                                                                                          <---------ICU4                                                                                          --------->ATHB12                                                                                         <---------YAB1     <---------ICU4                                                                    --------->YAB1     <---------AHL20(2)                                     --------->ATHB12          <------ZmHOX2a(2)     --------->AHL20(2)                              <---------ARR11(3)               ===============    <---------ATHB12      <---------YAB1             --------->ARR11(3)         --------->MYB52(1)    --------->ICU4 <---------ALFIN1         ----------->GT1<---------YAB1      ----------->HVH21<---- -AHL20(2)    --------->YAB1   ---------->DOF2   ---------->DOF2     <-----------RAV1(1) --------->ICU4   tatgcaattaatacaatagtcacacattttgattaaagctaataagagataaaaagaactcacgattagtcttgttgcagactgacggatcatgattaat  27651900                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                       --------->TGA1a                                                                                       --------->bZIP60(2)                                                                                       --------->ANAC58                       <---------ANAC58                                                ----------->HVH21                       <---------ANAC58                                                --------->O2                 <---------YAB1                                               <-------TEIL                --------->AHL20(2)                                          --------->At5g28300                <---------AHL20(2)                                          <------NtERF2              <XXXXXXXXXXXXXXXXXXXXMIR406       ----------->RAV1(2)        <---------ORA47(2)       <             <---------ARR11(3)               --------->ARR14(2)           <---------DEAR4(2)       - -YAB1       <---------ARR14(2)             <---------MYB52(2)             <---------DEAR3(2)    ---- -WOX13(1)   --------->ARR14(2)            --------->ANAC58               <---------DEAR3(1)     ==== ==================HOX2a_HOX2a             --------->ANAC58               <---------DREB2C(2)    ==== -------GT1 <------ZmHOX2a(1) <----------DOF2 <---------ARR14(2)          --------->ALFIN1<---------ALFIN1   accacatgagtcgaggattttaatagcgttctctttggtgagagcaaggaacctgagcaagtctggatgtttgaaggcggtgcatagacacgacacatcc  27652000                                            <---------ARR14(2)                                           <------ZmHOX2a(1)                                        <------NtERF2                                      <---------ANAC46                                      <---------DEAR3(1)                                      --------->ALFIN1                                     <------NtERF2                                     <---------LBD16                                     <---------At4g35610                                     --------->ATERF1(1)                                     --------->At4g35610                                     <---------ABI4(1)                                    <---------RAP2.6(1)                                    <---------ORA47(2)                                    <---------ATERF1(1)                                    <---------ERF1                                    ------>NtERF2                                    <---------RRTF1(1)        ------>ZmHOX2a(2)           <---------RAP2.3(1)                                             <       <------ZmHOX2a(2)           <---------RAP2.3(2)                                              <      --------->ARR14(2)           <---------RRTF1(3)                                               <      <---------ARR14(2)           <---------RRTF1(2)                                           -----   <------NtERF2                   <---------RAP2.6(2)                                      <-------- <---------DEAR3(1)                <---------DEAR3(1)                <---------bZIP60(2)   ------->TEIL ---------HSFB2a(2)                <---------ATERF1(2)            ----------->HVH21     --------->ANAC55(2) -------->HSFB2a(2)                --------->ATERF1(2)          <-------GAMYB           <---------ANAC55(2) -->ZmHOX2a(1)  <---------At4g35610<---------DREB2C(2)       ------->TEIL               --------->ANAC46 =============HOX2a_HOX2a          <---------ANAC46        <---------SPL7               --------->ANAC58 ==============HOX2a_HOX2a         <---------RAP2.3(3)   <---------------AtSPL3         --------->ANAC58   ttctcggcgatctgtttcatcggattacaacacaatggcggcggaggaatcgacaagtgaatgtacggttgacatggcattagttttgctacgcatctca  27652100                                       --------->ANAC46                                       --------->ANAC58                                       --------->ANAC58                                      <---------LBD16               <---------ZAT14                                     <---------AtLEC2        <---------MYB46(3)        ------->TEIL             <---------ANAC58            ----------->GT1   <-------GAMYB                 <---------ANAC58           --------->ALFIN1 ---------ANAC58          <---------At4g35610               <---------AtMYB61 ---------ANAC58          <---------ZAT14                   <---------DEAR3(1)  <---------ANAC58 ---------ANAC46          --------->ZAT14                <---------DEAR3(1)     <---------ANAC58 ------------------>TaNAC69(2)----------->HVH21       --------->ETT(2)       --------->GLK1(1)    <-- -At4g35610     --------->LBD16  <---------ANAC46  ----------->TGA1 --------->ZAT14       <-------TEIL   ttgcctgttgaacgtctccgaaaaattgtgctgtgacttgcacggagtagagaatgacgacggtggtgactacaccgagaattcttgtgatattcatttt  27652200                                                               <------MYB46(1)                                                               <---------HSFB2a(1)                                                               --------->HSFB2a(1)                                                        <------------CBF                                                      --------->ARR11(3)                                   <-----------GT1    <---------AHL20(1)                            -                                  <---------AHL20(2)  --------->AHL20(1)                            <                      <---------At4g35610        ----------->GT1        <----------DOF2           <--          <---------ANAC46<---------ANAC46   ---------->DOF2   <------MYB83 <-----------GT1 <-------- --------DOF2         --------->At4g35610 <---------------AGL15----------->GT1         <------ZmHOX2a(1)   ctttttgttatgcagtgtttgttttgctgagtgtattttatctcatataaagagaaaatattggaaggttttttcttttaacttagctaggaaatattgg  27652300                      <-----------HVH21                     --------->ANAC58                     <---------At4g35610                     --------->ANAC58                     ----------->GT1           ----------->HVH21       --------->ATHB12       --------->ATHB51--------->WRKY18(1) --------->CCA1(2)   <------MYB46(1) ---------->DOF2                        --------->ANAC55(2)<----- -------->ARR14(2)   --------->At4g35610                         <-----------TBP     <---------YAB1 ---------ARR14(2)   <------MYB83<---------TOE2(3)     <---------ZAT14 <------MYB83----------->GT1 -------MYB46(3)   <-----------RAV1(2)--------->DAG2   --------->ZAT14<---------TOE1(2)     --------- ----CBF<------------CBF    --------->YAB1        --------------->AGL15<------MYB46(1)  <---------YAB1   tggatacaactattggacagggcaggtcaaacatagaggtaaagttttgtttcttagtatagtagttttttgtaggttactgaatttgttattatacaat  27652400                                  ----------->TBP                               <----------ID1                   <---------ARR11(3)                   --------->ARR11(3)                   --------->ARR11(1)                                <------------CBF       --------->YAB1 ----------->HVH21                             --------->DAG2    <------------CBF--------->CCA1(2)                       --------->GLK1(1)         <-----------GT1 -------CBF        --------->ARR14(2)                       <---------GLK1(1)      <---------ICU4 --->CBF           <---------ARR14(2)            <-----------------AGL2           --------->ICU4 <---   tgaatgtattgataagaccaagatatgaccaaggctacaaaatccaaaatgtctgaatttggatttccaaaaattgactaaatactaattaccagtatat  27652500                                           --------------->AGL15                                           <---------ZAT6                                   <-----------GT1                                         <---------TOE2(3)                                <---------YAB1                        ----------->GT1--------->GLK1(1)                         --------->YAB1    <---------------AGL15    ---------->DOF2<---------ANAC55(2)                     ------>ZmHOX2a(1)--------->TOE2(3)     <---------ALFIN1       --------->ANAC55(2)  ----------->HVH21 --------->TOE2(3) <---------MYB59      <---------ZAT14--------->AHL20(2)<-------- ----TEIL  <-----------GT1--------->ARR11(3)              <<<<<<<<<<<<<<<<<LFY--------->RVE1(1)  ----   acatgtgacaagtttaccatttccttataatcttgtgataccttactgttataagttagtctccactggataaagataaaatatcaggtatctaatgttg  27652600                                                  --------->AHL20(2)                                                  --------->AHL20(1)                                                  <---------AHL20(2)                                                  <---------AHL20(1)                                               --------->AHL20(2)                                               <---------AHL20(2)                                 --------->AHL20(2)                         ----------->GT1      <---------AHL20(2)                    --------->AHL20(2)        --------->YAB1  ----------->GT1                    --------->ICU4            --------->AHL20(2)             <---------ZAT14  --------->At5g28300  --------->ICU4   --------->TOE2(3)   <---------WOX13(1)  --------->MYB46(3) ----------->GT1  --------->TOE2(3)    ----------->GT1<-----------GT1 --------->WRKY38(1) ---RAV1(1) ------->TEIL<---------ICU4--------->AHL20(1)  --------->ATHB12   --------->ZAT14   ------ ------->HVH21--------->YAB1     <---------AHL20(2)<---------ICU4   <----------DOF2----------->RAV1(2)   ggacagtgaaaatgtatcagcattaattagtatatataaatatgttaattaaaatattactaattggtaactttgactgtgaacagcctggctctaaata  27652700  Previous    Next  AGI:  At1g73550.1    Description:  lipid binding. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT1G73560.1); similar to hypothetical protein OsI_023563 [Oryza sativa (indica cultivar-group)] (GB:EAZ02331.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140) Range:  from: 27651417    to: 27652197    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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