Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ------>ZmHOX2a(1)                                          <---------ARR14(2)                           <---------ALFIN1                                          --------->ARR14(2)                          =============== ---------ARR10                          <---------GLK1(1)                            ------>ZmHOX2a(2) -------ARR14(2)                     --------->ANAC46                                <------ZmHOX2a(2) ------>ARR14(2)                     --------->ANAC58 --------->DEAR3(1)             ================ ----ANAC58                          --------->ANAC58 <---------ANAC58              --------->ARR14(2) ----ANAC58          ================HOX2a_HOX2a      <---------ANAC58              <---------ARR14(2) ----ANAC46          ------>ZmHOX2a(1)   --------->GLK1(1)                       <---------TOE1(2) -TEIL         <<<<<<<<<TBF1  =======================HOX2a_HOX2a         <---------At4g35610 ->ALFIN1 <---------ANAC58    ==========================HOX2a_HOX2a      <---------CCA1(2)         -- >TOE2(2) <---------ANAC58    ------>ZmHOX2a(2)  ------>ZmHOX2a(1)    <-------TEIL<---------MYB46(3)   tgtcttctccttgcttcttcttcctcgtttgatctgtaaacgcatttcctccttcgccgtgcctgaagaagtttcatctctcgttggatccactcttgtt  27623400                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                             --------->GLK1(1)                                            --------->ARR14(3)                                            <---------ARR14(3)                                            --------->ARR14(2)                                            <---------AGP1                                            <---------ARR11(1)                                            <---------ARR14(2)                                            <-----------ARR10                         <---------AHL20(2) <---------ARR11(3)     <----------DOF2                        <---------YAB1      --------->ARR11(3)    <------NtERF2          <---------ARR11(3)                       <---------AHL20(2)  <---------ARR14(1)    ------>NtERF2--------->ATHB12  <----            <---------AHL20(2)<-----------GT1<---------GLK1(1)  <---------ANAC58         --------->ARR11(3)     ---------->ID1  <---------YAB1        <---------CCA1(2)    <---------ANAC46        <------ZmHOX2a(1) =====HOX2a_HOX2a   <------------------------ANAC81 <---------GLK1(2)        <---------YAB1     <---- =====HOX2a_HOX2a  <---------AHL20(2)     --------->LBD16       <---------ANAC58      <---------TOE2(3) ---->ZmHOX2a(1)  <---------YAB1        <---------LBD16      <---------DEAR3(1)       <---------TOE1(3)   cctccttgtcttcttaaatttttatttttatttttctggttctccggatctccagactcttcgatggcgcgtttggagcatgatttctaaggatttttag  27623500                                         --------->LBD16                                        <---------ANAC58                                        <---------ANAC55(1)                                        <---------ANAC55(2)                                        --------->ANAC55(2)                                        <---------ANAC46                                        <---------ANAC58                            --------->At4g35610                       <------NtERF2                           <-----------RAV1(1)                 <---------ANAC58                         --------->At4g35610                   <---------ANAC58                         <---------At4g35610        <---------O2     --------->LBD16            <------------CBF<---------At4g35610     --------->O2     ----------->GT1          <---------YAB1 ----------->RAV1(2)        --------->TGA1a --------->LBD16 -----TOE2(3)           --------->ARR14(2)          <---------TGA1a --------->ETT(1) -----TOE1(3)           <---------ARR14(2)     --------->At4g35610 <---------LBD16                ---   ggtttttatgctcttattgaagttcgcatctgctgcatcgttccgtatgagcaaacgtgagtctggtttgccggaaaaaacttgtttctgaaatgtgact  27623600                  --------->ARR14(2)                  <---------ARR14(2)                  <---------ARR11(3)                --------->GLK1(2)                <---------GLK1(1)                  <---------GLK1(2)                <---------ARR11(3)            <---------ANAC46                  --------->ARR11(3)               --------->ARR11(3) <---------MYB52(1)   <------------CBF   <---------YAB1               <---------GLK1(2) --------->TOE2(3)           ---- ------->DOF2   ----------->ARR10     <----------DOF2       <------------CBF  <---------ARR14(2)<----   gaaagtattggttttgggcagattttgattcttctaatgtcttttggtagaaagattcttcaaattgttttcgttagagggttctgggtatcagacaaca  27623700                                       <------MYB46(1)                                       <------MYB83                                      --------->ALFIN1                                      <---------MYB46(3)                                      <---------AtMYB61                                    <------------CBF                                   <------ZmHOX2a(1)                                   --------->ATHB12                               <-------TEIL                            <---------ANAC46                            <------MYB83                            <---------ANAC58                            <------MYB46(1)                               ----------->GT1       <----                            <---------ANAC58                            <------------CBF    <--------                           <---------MYB46(3)               <---------ANAC58     --------->MYB52(1) -         ---------->DOF2   --------->MYB59      <---------AHL20(2)   <---------CCA1(2)      ---------    ----------->GT1        <---------------AtSPL8 <------------CBF <---------------AGL15    --------- ----->At4g35610       <-----------RAV1(1)      <---------YAB1     ------>ZmHOX2a(1)        <-------- -----ARR11(3)       <----------DOF2--------->ARR14(2)      <---------ANAC58    ----------->HVH21<---   tctgaacagagaaaagttttcatctttgttgggtacaggattggtggagttttattgccagtgcttctcctgtatattgtaaatgacggaccagagctct  27623800                                                         --------->ANAC55(2)                                                         <---------ANAC55(2)                                                         <---------ANAC46                           --------->YAB1            <----------DOF2                           <---------ICU4          <---------HSFB2a(1)                           --------->KAN4(2)       <---------HSFC1(2) -------RAV1(1)           --------->ICU4  --------->ZAT2 <---------ANAC58 -ZAT14                   <---------KAN4(1)        --------->HSFC1(2) -------->ATHB12          --------->KAN4(1)     <------ZmHOX2a(1)               ----------->HVH21 >GLK1(1)                <---------KAN4(2)<---------ZAT2 <---------ANAC58    <-----------HVH21 >ZAT14                <------ZmHOX2a(1)  <---------At4g35610            --------->MYB52(1)  <------- -GLK1(1)            <---------TOE1(2)    --------->At4g35610           <-----------GT1     <-------- ----GAMYB         --------------------->WRI1 <---------TOE2(3)  --------->At4g35610        <--------   gttgatgggattttagagtttcttaggaataatcgcttctctcaagctgaggaagctttgcgtaatgagcttaataaccggtctgacattaatggctttc  27623900                                         --------->ZAT2                         <---------ZAT18                          <-------TEIL   <---------ZAT2                         <---------ZAT14                         --------->CCA1(2)<---------ANAC46            --------->HSFB2a(2)  <---------GLK1(2) ---------->DOF2      --------->At4g35610   <-----------RAV1(2)            ------- ---DOF2         <------ZmHOX2a(1)       <---------At4g35610 <-----------HVH21  --------->ZAT14 -ANAC58  --------->At4g35610       --------->DAG2     <---------LBD16<---------HSFB2a(2)     <------ -ANAC58  <---------At4g35610     ---------->DOF2   ------->TEIL  <---------GLK1(2)       --------->ANAC46   ttcagaaacttaagctggaggataaagattcaaatgaaaaggctgctggtaatgaacttcggaggtcaggttctcgagatagtgaagtctccaaggagct  27624000                                                                          <---------ARR14(2)                                                                          --------->GLK1(2)                                                                          --------->ARR14(2)                                                                      ------>NtERF2                                                                      <------NtERF2                                                                    <---------ANAC46                                                                   --------->ATERF1(1)                                                                   --------->At4g35610                                                                   <---------At4g35610                                                                   <------NtERF2                                                                  <---------ATERF1(1)                                                                  <---------RAP2.3(1)                                                                  ------>NtERF2                                                                 <---------RAP2.3(2)                                                                 <---------O2                                                                --------->ATERF1(1)    ---------->DOF2                                            <---------ATERF1(1)  <---------YAB1                                  ----------->GT1--------->O2 --------->LBD16 -->At4g35610     --------->ALFIN1               --------->ALFIN1<---------DEAR3(1) ---At4g35610   <-----------RAV1(1)     <-------GAMYB         ----------->HVH21--------->ANAC46   gattgtgaaagaggtagactgtgggactagcaccaatgggtctgttatcaagtgggaaaatggtgcgacggcggacaatccgagcaagaaggaaccagtt  27624100                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                      <---------ARR14(2)                                                                                    --------->LBD16                                                                                   <---------------AGL15                                                                                   --------->HSFB2a(2)                                                    <---------ALFIN1               <---------HSFC1(1)                                             --------->At4g35610                   --------->HSFC1(1)                                             <---------ZAT2                        <---------HSFB2a(2)                                             <---------At4g35610                   --------------->AGL15                                            ======================RAV             <-----------------AGL2                                            <-----------RAV1(1)                   ----------------->AGL3                                          <---------At4g35610                     ----------------->AGL1                                      ----------->HVH21                           <-----------------AGL3                                      --------->ALFIN1----------->RAV1(2)         ----------------->AGL2                                    <---------At4g35610                           <-----------------AGL1               <----------DOF2      --------->At4g35610 ------>ZmHOX2a(1)    <-----------GT1  <------NtERF2        <---------At4g35610       ======================RAV              <---------AHL20(2)  ------>NtERF2        --------->At4g35610       <-----------RAV1(2)------>ZmHOX2a(1)  --------->AHL20(2) <---------ABI4(2)   <---------ANAC55(2)         <---------GLK1(1)<---------At4g35610  ------>ZmHOX2a(1)--------->ARR14(2)   gtatcaagtgagatgagctttacattctccaagaattcaggtgatgctgctgctcctcctgatgcccattcctataaatttacttccagaaatggcaccg  27624200        --------->ANAC46       --------->HSFB2a(2)       <---------HSFC1(1)       --------->HSFC1(1)       <---------HSFB2a(2)  --------->HSFB2a(1)                           --------->AHL20(2)  <---------HSFC1(2)                            <---------AHL20(2)  <---------HSFB2a(1)                   <------MYB83 <XXXXXXXXXXXXXXXXXXXXMIR2938           <---------ANAC46 ------>REM1(2)     --------->YAB1      <------MYB46(1) ----->ALFIN1      <---------YAB1   --------->ZAT2 ----ANAC46       <---------TOE2(3) --------->At4g35610                                 --------->GLK1(1) --->DEAR3(1)    --------->YAB1     <---------ZAT2            --------->MYB46(3)   <---------At4g35610   tggagccttctcgaaacattgatgatagtagtagtagcagcttggtggatttatatgcattcgaacagtcgaggcatgggaatttcgctgatatcgataa  27624300  Previous    Next  AGI:  At1g73460.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G17750.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G73450.1); similar to putative protein kinase [Oryza sativa (japonica cultivar-group)] (GB:AAT77851.1); similar to hypothetical protein OsI_012907 [Oryza sativa (indica cultivar-group)] (GB:EAY91674.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68568.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (Int Range:  from: 27623783    to: 27628753    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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