Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->At4g35610                       <------MYB46(1)                       <---------At4g35610                       <------MYB83                       ----------->GT1                      <---------AtMYB61                   --------->HSFB2a(2)                  <---------LBD16             --------->ATHB12            --------->ICU4             <----------DOF2            <---------YAB1    --------->DAG2   --------->ANAC58      ----------->GT1    ---------->DOF2<---------HSFB2a(2) <---------DAG2      <---------YAB1                <-----------GT1  <-------TEIL    <---------ANAC46 <-----------------AGL1  <---------ANAC55(2)        <---------ICU4 >DOF2--------->DAG2  <---------DEAR3(1)       --------->ANAC58    ---------->DOF2   --------->ICU4 --------->ANAC81<---------LBD16 --------->ARR14(2)   --------->ATHB12        ---------->DOF2      --   aagatgcaaaggcgatgatttcgggaggtgaaaaggtttcgctttaggcaagaaattgattacgaaaacaaaagaaaaaaaaaaggaatttttacaaatc  27585800                              --------->YAB1                              <---------ICU4                             --------->ICU4                           --------->YAB1                         --------->LBD16                         <---------RAP2.6(3)                --------->ANAC58                         --------->At5g28300                --------->ANAC58                 <---------YAB1                            ------>NtERF2 --------->DAG2           <--               <---------AHL20(2)                         <---------ALFIN1                        <--        <------MYB83    ----------->GT1                   --------->DEAR3(1)                      <--        <------MYB46(1) --------->ANAC46                 --------->MYB46(3)                 ------>ZmHOX2a(2)    --------->CCA1(2)   --------->RAP2.6(2)        <---------ZAT14      ---------->DOF2   <---------ARR11(3) -------->DOF2<---------AHL20(2)                   --------->ZAT14---------->DOF2         --------->ARR11(3)   caaaagagataggttttttattttagccgtaataatgtctcttcttagttctctacagagccaccctagaaagagaaagtgagatagtatatgatctctt  27585900                                       --------->ZAT14                                       --------->ZAT18                                   <---------ICU4                                  --------->ICU4                                  <---------MYB52(1)                               <------NtERF2                              <---------RAP2.6(3)                              ------>NtERF2                             --------->ANAC46               <---------ANAC58       <-------TEIL                             --------->RAP2.3(2)            <---------ANAC46      --------->ARR14(1)                             --------->RAP2.3(3)            <---------ANAC58     --------->ARR14(2)                             --------->DEAR3(1)          ---------->ID1          <---------GLK1(2)         <----------DOF2     --------->RAP2.6(2)       <-----------RAV1(1)       <---------ARR14(2)   ---------->DOF2          --------->ERF1          <----------DOF2              --------->ARR11(1) -------ANAC46              --------->RAP2.3(1)    <---------DAG2        --------->YAB1 -------ANAC58          ---------->DOF2<---------ZAT18 <---------MYB46(3)<---------ICU4 -------ANAC58       --------->At4g35610      <---------ALFIN1          <-------TEIL     ---------->DOF2   ccttgtaaagactttctcacctaagctaaagccgccattagtgctcccaaaccccttttgttgcttcttcaacattcattacagattcgctaaaagaaaa  27586000                      ----------->HVH21                   --------->MYB52(1)                   <---------ARR14(2)                <---------ANAC46  <---------AHL20(2)                <---------ANAC58 --------->AHL20(2)                            ----------->GT1                <---------ANAC58 <---------AHL20(2)      ---------->DOF2 ---------->DOF2    <----------DOF2--------->ARR14(2)            --------->AHL20(2)---------->DOF2   ---------->DOF2   ctctctctttagaaattggcgtaactgatgggtttttaaattgacagaagaaaaaatagaaaagagagagaaagagaaagagggttttaaagtctcttgc  27586100                                                                  --------->HSFB2a(1)                                                                 ------>MYB46(1)                                                                 -------->P                                                                 ------>MYB83                                                               <---------MYB59                                                               --------->AtMYB61                                                              --------->MYB46(3)                                       ---------->DOF2        --------->DEAR3(2)                                  <---------LBD16             <---------MYB55(2)                    --------->ZAT14 --------->LBD16         ------>MYB83                         ----                    <---------ZAT18<---------LBD16          ------>MYB46(1)          <----------DOF2-              <---------STY1(2)  <---------LBD16          <---------MYB59         *TSS          <----          <---------At4g35610--------->ZAT14           <------ZmHOX2a(1)  <----------DOF2       <----   tctctccattactgctaactagtactctcaccatactcggggaaagagagagagagaggaccgaaccaaccttcttcttttgtttctctttctatacaac  27586200                                                              ----------->GT1                                                              <------MYB46(1)                                                              <------MYB83                                                            <--------P                                                          <---------MYB46(3)                                            ----------->GT1<-------GAMYB                                            <-------GAMYB --------->MYB111(2)                                           ----------->GT1--------->MYB52(2)                                      <------NtERF2       --------->MYB55(2)                              <-----------RAV1(1)        <---------AtMYB61                  --------->LBD16   --------->ETT(1)  <---------DEAR3(1)                          ---     <----------DOF2         <---------TOE2(3)   <------------CBF                 <---------DAG2  --- --->GAMYB      <---------LBD16     <---------ANAC46  <---------DREB2C(2)         <----------DOF2<--- -------->ZAT6--------->ARR14(2)   ----------------->AGL1--------->ALFIN1      <------ZmHOX2a(1)<---- --------MYB.PH3(2)<---------MYB52(1)--------->LBD16--------->MYB52(1) --------->DAG2      <---------DAG2 -----MYB52(2)<---------ARR14(2)   <---------LBD16 ----------->HVH21  ---------->DOF2      <---------   taactctcttttttaagttccggtggatttttatgttgccggagagggttaaattgacggtggttggataaaaaaaggagaggactttatccactttctc  27586300                                               <---------ARR14(2)                                               --------->ARR14(2)                                           <---------LBD16                                       --------->ATHB12                                    --------------->AGL15                                     <------                                    <---------------AGL15                                  --------->AHL20(2) --->NtERF2                      <-----------GT1                    <<<<<<<<<TBF1         <---------AHL20(2) ------>LBD16          --------->YAB1 <---------YAB1              <------------------------ANAC81  <- ------DEAR3(1)       <----------ID1<----------DOF2     <---------ARR11(3)             <---------AHL20(2) -----LBD16         --------->YAB1 <-----------------AGL3 ------>ZmHOX2a(2) <----------DOF2<---------AHL20(2) -DOF2         <---------ANAC46 --------->AHL20(2)  <---------At4g35610<<<<<<<<<TBF1  <---------AHL20(2)   cggcgattttctcaccttcgtataatgacaaaaattaacttttattggggattttgctgatctcattttcttcttcttctttggattttttatttatttc  27586400                                          <-----------GT1                                       <---------------AtSPL8                                      <-                                       --------------->AtSPL8         --------------->AtSPL8     <---                                    --------->AHL20(2)       --------------->AGL15              <----                                    <---------AHL20(2)       <---------MYB59               --------->ARR11(3)                                   --------->AHL20(2)        <---------------AGL15         <---------ARR11(3)                                   <---------AHL20(1)       ----------------->AGL2     ---------->DOF2                                   <---------AHL20(2)       ----------------->AG      --------->AHL20(2) -----GT1   <---------TOE1(2)  <---------YAB1          <---------ICU4 <---------------AtSPL8 -------- ---------DOF2               --------->YAB1  <----------DOF2=========================================   tctttctcatttcccaagttttcttactctgttataatttaattgtactttctctaatttttgcctaatttagatgtactaaaaacaaataaagatttat  27586500                                                                  --------------->AtSPL8       --------->ANAC55(2)                                       <----------DOF2       <---------ANAC55(2)                                <---------YAB1   --------->YAB1                      --------->GLK1(2)--------->YAB1  <---------YAB1                       --------->ARR11(3) --------->AHL20(2)           --------->TOE2(3) --------YAB1            ----------->GT1       ---------->DOF2<---------AHL20(2)   <---------DAG2 --------GT1      --------------->AGL15<---------ARR11(3) <---------AHL20(2)       <----------DOF2 -----YAB1        <---------------AGL15--------->ARR14(2)--------->AHL20(2) --------->GLK1(2) ->AHL20(2)<---------AHL20(1)          <---------ARR14(2)<---------AHL20(2)<---------GLK1(2)  ------- =================================MADS_MADS  --------->REM1(2)<-----------GT1   <-----------GT1  <---   tactataatacataatatttcttcaaaatgaaaaatgagaaaatctgtgtaaaggcaattttaattactttgtactagattcttacttttcttaaaacac  27586600                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 ----                                <---------AHL20(2)                                               ----                                --------->AHL20(2)                                             ------                               --------->YAB1                                                  <-----                            <--------HAHB4                                                  ---------                            --------->YAB1                                                 <---------AHL20(2)                           <---------YAB1                                                  --------->AHL20(2)                        ------>ZmHOX2a(2)                                                 --------->AHL20(2)                       <------ZmHOX2a(2)                                               <---------RVE1(1)                      --------->AGP1                       <----------DOF2             <---------CCA1(1)                      --------->ARR11(3)                <-----------GT1               --------->ARR11(3)                      <---------ARR11(3)            <---------RVE1(1)                 <---------ARR11(3)                      <---------AGP1                <---------CCA1(1)              <---------TOE2(3)-                  ---------->DOF2      <---------GLK1(2)<---------AHL20(2)         <---------TOE1(3)<              --------->ZAT18  <---------AHL20(2)  --------->ARR11(3)       <---------------AGL15<--- -->ANAC46 <---------ANAC46<---------AHL20(2)<---------YAB1<---------DAG2   --------------->AGL15<--- ------ALFIN1 <---------ZAT18  --------->AHL20(2)  <---------ARR11(3) <---------ICU4 <------ZmHOX2a(1)   cacttgttttgtttagtgaacaaagatctataattaaaatggattttcttatagatatttacttttctcaaaacattactagtttaaggatatttaataa  27586700  Previous    Next  AGI:  At1g73360.1    Description:  HDG11 (HOMEODOMAIN GLABROUS11); DNA binding / transcription factor. similar to HDG12 (HOMEODOMAIN GLABROUS12), transcription factor [Arabidopsis thaliana] (TAIR:AT1G17920.1); similar to baby boom interacting protein 1A [Brassica napus] (GB:ABA54874.1); similar to baby boom interacting protein 1B [Brassica napus] (GB:ABA70759.1); similar to homeodomain protein HOX3 [Gossypium hirsutum] (GB:AAU12247.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Lipid-binding START (InterPro:IPR002913); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix moti Range:  from: 27582357    to: 27586182    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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