Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ------->GAMYB   ----------->RAV1(1)                              --------->ANAC58                    --------->YAB1  --------->REM1(1)             --------->AtMYB61   --------->ANAC58      <----------DOF2 ------>STY1(2)            --------->AHL20(2)  --------->ANAC58        <---------ARR11(3) -------STY1(2)       <---------ATHB12         --------->ANAC58        --------->ARR11(3) >ZAT14             --------->WOX13(1)      <---------ALFIN1---------->DOF2        <---------ATHB12   agctacaacagcaaaaaaaaaacaatcaataaaaccacaacttgctccaacgctaagcaaaaaaaagaaacaagagcttaatcgaatcaataacatttag  27580400                                  <---------ZAT14            --------->CCA1(2)                                  --------->ZAT14           --------->ARR11(3)                             <---------ZAT14     --------->YAB1                   <---------ATHB12             <---------ATHB12            --------->YAB1   --------->ZAT14   ------>MYB83 <---------ARR11(3)                   <---          --------->ANAC46   --------->ZAT18   ------>MYB46(1)                                   ----       --------->ZAT14  --------->ZAT14       --------->WOX13(1)    ---------->DOF2              <---       <---------ZAT14  <---------ZAT14---------->DOF2    <---------TOE2(3)                      ----   catacaaactacactcatcaaatcactgtagtatactgcagaaaagaccaatcaaactctaagatatatacaaagacaacctctctcgcatacaatttgt  27580500                                                                                               <-----                                                                                              -------                                                                                    --------->ANAC55(2)                                                                                    =================                                                                                    --------->O2                          ----------->GT1                                           <---------ANAC58                         --------->MYB59                                            <---------ANAC46                        <-------TEIL                                                --------->bZIP60(1)                       --------->GLK1(2)                                            <---------bZIP60(1)                       --------->CCA1(2)                                            <---------O2                       --------->ARR14(1)                                           <---------ANAC58                      <---------GLK1(2)                                             <---------TGA2(1)                      --------->ARR11(1)                                            --------->TGA1a                      <---------ARR14(2)                                            --------->TGA2(1)                      --------->ARR14(2)                                            <---------TGA1a                     --------->HSFC1(2)                                            ----------->STF1     <---------YAB1  --------->HSFB2a(1)                                         ----------->TGA1----   XXXXXXXXXXXXXXXXXXXX>MIR844                                                   ----------->HVH21 ------ZAT18         <---------HSFB2a(1)                          <---------ATHB12<---------TGA2(2) - ----->ZAT18         <---------HSFC1(2)                   --------->TOE2(3)   --------->DAG2 -------- ------ZAT14        ----------->ARR10               --------->At4g35610<---------MYB46(3)    <------- ----->ZAT14   ---------->DOF2              <------ZmHOX2a(1)     --------->MYB46(3)<---------bZIP60(2)   gcacagtaagattgctcaaaagaagattcggtaagaatattggagaggacgatgcgctaacctttgcaaccattcgttgaaaggtgacgtcttcatcatc  27580600      <----------DOF2     <---------DAG2  <-----------GT1                         ---------->DOF2 ----YAB1                                --------->LBD16 -->TOE2(3)                    ---------->DOF2                                  <---------HSFB2a(2) ================bZIP_DOF    --------->MYB46(3)                             --------->GLK1(1) ----->WOX13(1)   <---------ANAC58      --------->ANAC58                    <---------GLK1(1) -------->YAB1    <---------ANAC58      --------->ANAC58       <---------At4g35610--------->HSFB2a(2) ->YAB1        --------->GLK1(1) ---------->DOF2    ---------->DOF2   ---------->DOF2 --ICU4   <---------LBD16  ----------->RAV1(1)---------->DOF2  --------->At4g35610<---------HSFB2a(2)   aatcttacctttccctgatttcttatctgcaacaaaagagccccgaaagaaagaaaaagaaacagagctcaaaaaaggaattctcgagaaccctagaatg  27580700           ------->TEIL--------->YAB1                             <-----------GT1          <-----------GT1           <----------DOF2<---------ARR14(2)        <---------ATHB12           <---------DAG2  --------->ARR14(2)    --------->MYB46(3)<---------ATHB12             <---------GLK1(2)           ------>NtERF2  <-----------GT1   --------->WOX13(1)    <-----------HVH21    <----------DOF2--------->ANAC46  <----   aaattaaccaatgaaccatattcaatcaaatgtctcacctttagggtcagacagatttgtgtattctttaacttctctccctgccatcgtcttcgattct  27580800                                                                                     <----------ID1                                                                                    <------ZmHOX2a(1)                                                                               --------->ALFIN1                                                                               ----------->HVH21                                   <------------CBF                         <------ZmHOX2a(1)       <             --------->LBD16  --------->ARR14(2)                         <---------HSFC1(1)         =            --------->ANAC55(2) <-------TEIL                             --------->HSFC1(1)      <---            --------->ANAC46  <---------ARR14(2)                         <---------HSFB2a(2)<--------            <---------ANAC55(2)--------->ARR14(1)                        --------->HSFB2a(2)---------    <----------DOF2   <---------ARR11(3)                         <---------TOE1(2)  ================= -------GT1<---------LBD16    <---------GLK1(2)          <---------TOE2(3)  =========================   acctcgctttaatcccgtaatctagttcttcagattcgattgaaatttctaagaagattagggttccaacgttttctaggagtgaaggagacgaagatga  27580900     <------------CBF                 --------->At5g28300 ------ZmHOX2a(2)              <---------ARR14(2)                 <-----------GT1 ====================================HOX2a_HOX2a            <------MYB83 ------YAB1                    <------------CBF        --------->ATHB12          <---------ANAC58 -At4g35610                    --------->ARR14(2)   <---------ANAC58             <---------ANAC58 >At4g35610                   --------->ATHB12      <---------ANAC46          <---------MYB52(1) ======HOX2a_HOX2a            <------ZmHOX2a(1)     <---------ANAC58         <------------CBF ======HOX2a_HOX2a      --------->MYB46(3)    <---------YAB1<------MYB46(1) --------->ATHB12    <----   cgatcgaaattggtaatggttctctaacaacaggattggctgtgaattctgatggagtgatttggtttttactcttctccattgggtttgggtttactat  27581000                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                               <---------ICU4                                                                            --------->YAB1                                                                <---------ICU4 --------->ATHB12                                                                --------->YAB1 <--------HAHB4                                                               <---------YAB1 <---------YAB1                                                        <---------AHL20(2)  <---------ICU4                                          --------->ARR14(2)<---------AHL20(2)--------->ICU4                                       ------------>CBF<---------AHL20(2)  <---------ATHB12 -----YAB1                     <-----------GT1     <----------DOF2     ------------>CBF   gaataacttatgggcctatatttaagcccgttttaactgagcccaatactcttcttttttattttataatgacttcaataatcatttaatttcttcaatc  27581100                                        --------->AHL20(2)                                      <---------YAB1                                    -------->ATHB1                                                  -                                    <---------ICU4                                                ---                                   <---------ATHB51                                              ----                                   <---------AHL20(2)                                            ----                                   --------->AHL20(2)            <---------ICU4                  <---                             ----------->RAV1(1)              --------->YAB1                    <----             <------ZmHOX2a(1)     --------->ICU4      --------->CCA1(2)                        -----       ---------->DOF2  ---------->ARF1 <---------AHL20(2) --------->YAB1              ----------->GT1   caaaaaaaaaaaagaggagacaatttgtctcccacaaattattaaaacaactacaagataagaataagaattgcatattgtttagaagaatgaaaaaaat  27581200 <---------AHL20(2) --------->AHL20(2) <---------AHL20(1) -------->AHL20(2) ------>TOE2(3)                              <---------AHL20(2) ----->YAB1                                 --------->AHL20(1) ----->ATHB12                               <---------AHL20(1)     <---------AHL20(2) ------ICU4        --------->ANAC46         <---------AHL20(2)     --------->AHL20(2)               < -----ATHB12     <-----------GT1            --------->AHL20(2)<---------ATHB12      <-----------ARR10 ---->ICU4----------->RAV1(1)        --------->TOE2(3)  ---------->ID1 --------->AHL20(2)    --------   cattaaattttgcaacaaattacaccactaagaaacttatctcaaatttatttcatatgtcccattcatttttttatatactatagtatctatccactta  27581300  Previous    Next  AGI:  At1g73350.1    Description:  similar to Os02g0637900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047530.1); similar to unknown [Picea sitchensis] (GB:ABK22187.1) Range:  from: 27579154    to: 27580787    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version