Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->At4g35610               <---------At4g35610                                                              -----            --------->At4g35610                                                               <------      ------>MYB83                                                                            <------      ------>MYB46(1)                                                                         <------    --------->AtMYB61                                                                      <---------DEAR3(1)    <---------MYB111(1)                                                                 --------->ZAT2    <---------MYB111(2)                                                             <------ZmHOX2a(2)    <---------ALFIN1                                                               --------->ARR11(3)    --------->MYB46(3)                                                   <---------WRKY18(1) <------NtERF2  --------->ANAC46                    <---------ANAC58                  ----------->HVH21  ---------- -ANAC58    <---------At4g35610       <---------ANAC58   <------ZmHOX2a(1)        --------->At4g35610 -ANAC58--------->TOE2(3)   <---------ANAC55(2)          ==================================HOX2a_HOX2a -ANAC46<----------DOF2<------ZmHOX2a(1)          ---------->DOF2      <----------DOF2  <---------ZAT2   ataccaccaactttagctgctgctaggattacataaactggcttctcttgagaaaagaaggattcaacatcggcttgacgagtgagatcaagctcggcgt  27549700                                                               --------->ANAC46                                                               ------>MYB83                                                             ------->GAMYB                                                             <---------MYB59          <---------ARR14(2)                                                      --------->AGP1                  --------->ARR14(3)                                                      <-----------ARR10               <---------ARR14(3)                                                      <---------ARR11(3)              --------->ARR11(3)                                                      --------->ARR14(2)              <---------ARR11(3)                                           <<<<<<<<<<<<<<<<<LFY------>MYB46(1)        <---------GLK1(2)                                           ------>NtERF2     --------->AtMYB61      ----------->ARR10                                          --------->LBD16   --------->MYB46(3) ------>NtERF2                                         <---------ANAC58  ------>MYB46(1)    ----------->HVH21                                         <---------ANAC46  -------->P  --------->WRKY38(1)                                         <---------ANAC58  ------>MYB83--------->WRKY12                                        <---------LBD16<------ZmHOX2a(2)     --------->LBD16 ---->ALFIN1                         <---------ANAC58 <---------ARR14(2)    --------->ANAC46 ---ANAC46                           <---------ANAC58<---------At4g35610    --------->ANAC58        < ---ANAC58      <------MYB83  ----------->RAV1(2)    --------->At4g35610    --------->ANAC58    <---- ---ANAC58      <------MYB46(1) ------>ZmHOX2a(1)    --------->GLK1(1) ----------->HVH21        <---- >CDC5          ----------->GT1 ==============================HOX2a_HOX2a  <---------LBD16      -----   gtgttttaagaacgagattggtgaaaccttgttcctgaagcttgcggacaatggcagatccaaccaaaccacgatgacccgcgacgaagattttggcaga  27549800                                --------->YAB1                           >>>>>>>>>RAP2.2            --------->ANAC46   <---------YAB1                          <---------ARR11(3)            --------->ANAC58 --------->YAB1               <---------TOE2(3)             --------->ZAT14            --------->ANAC58 --------->AHL20(2)         --------->MYB52(1)          --------->YAB1 -----------HVH21     <---------ZAT18            ---------->DOF2 <-----------GT1 --------->WOX13(1) -----ARR14(2)        <---------ZAT14           <---------AHL20(2)    --------->GLK1(1) <---------ZAT14 -----GLK1(2)         --------->ZAT14           --------->AHL20(2)<---------TOE2(3)<---------ATHB12 < ---->ARR14(2) --------->ARR14(2)        ------>NtERF2  ---------->DOF2--------->ARR11(3)         ---   tttgtcagacatggacgaaacctctgcacaattataaaaacgctgcgaaattaaagactaaaggttttgacgatatctaaaatcaatcactatacaaaat  27549900                                       <---------TOE1(2)                                       <---------TOE2(2)                                 --------->KAN4(2)                                --------->HSFB2a(1)                                <---------HSFB2a(1)                                --------->KAN4(1)                                <---------KAN4(1)                                <---------HSFC1(2)                                --------->HSFC1(2)                                             ------                               <---------KAN4(2)                                           <---------REM1(1)                            --------->LBD16               <-------TEIL        ----------->GT1 -------                           --------->HSFB2a(2)    --------->ANAC46    ----------->GT1     --------->ARR11(3)                           --------->HSFC1(1)     --------->ANAC58   --------->DAG2   ---------->DOF2 ---------ATHB12           <---------HSFB2a(2)    --------->ANAC58   ------------------------>ANAC81 ------>WOX13(1)           <---------HSFC1(1)  --------->TOE1(2)   ---------->DOF2---------->DOF2   <   caatcgatatcgtccatacatttttagttccagaacattcgcatgttgacatacgaaagattcaattgagaaaggtgaagaagtaaaagaaagatgtacc  27550000             --------->LBD16             ------>NtERF2                                                     --------->HSFB2a(2)            --------->ANAC46                                                   <---------HSFB2a(2)           <---------LBD16                                                    ------>ZmHOX2a(2)         <---------ARR14(2)                                                   <---------LBD16         --------->ARR14(2)                                                  <------ZmHOX2a(2)     <------ZmHOX2a(2)                                                      --------->ARR14(2)    <---------ARR14(2)                                              --------->At4g35610    --------->ARR14(2)       <---------HSFB2a(1)                    <---------At4g35610          <--- ----->RAV1(2)       <---------ANAC58         ----------->GT1       --------->ZAT2         <---------ARR11(3) >TEIL------>ZmHOX2a(2)      --------->HSFB2a(1)      ----------->GT1       <---------ARR14(2)  *TSS ---------At4g35610  <---------ANAC58     ---------->DOF2          --------->GLK1(2)       --------->ARR11(3)   tgagccgatcgtttccgccattttcgttcaaaggttccaagaggcaaagggtagaattgtaaatggaagaagctgagagatcgggaagaagacgatattg  27550100                                                ----------->GT1                                               ------>ZmHOX2a(2)                                               <-----------------------TaNAC69(2)                                              <------ZmHOX2a(2)                                             --------->ARR14(2)                                             --------->ARR11(3)                  <----------DOF2            <---------ARR14(2)                             <--------       <---------AHL20(2)                    <---------ARR11(3)<----------DOF2             --------->AHL20(2)       --------->AHL20(2)                --------->LBD16   --------->WRKY45            --------->AHL20(2)      --------->AHL20(2)                <-----------RAV1(2)--------->WRKY38(1)         <---------AHL20(2) <---------At4g35610                    <---------LBD16    --------->WRKY12          --------->TOE2(3) --------->At4g35610                   <-------TEIL       --------->DOF5.7(2)        <----------DOF2 --------HVH21<-----------GT1      --------->MYB59        <---------MYB52(1)      <---------ARR11(3)   gtcagcaaaaaaatttataccttttaaaaaaactgtttaggtccagggatctgtgaaaccgttgactttcaccgataaaacgtagaactttaatttacta  27550200                                                                                                    <                                                                                                    <                                                                                                   --                                                                              <---------ANAC55(2)  <-                                                                              <------MYB46(1)      --                                                                       <---------------AGL15     <---                                                                      <-----------------AGL1    -----                                                                      <-----------------AG    <------                                                                  --------->YAB1           <---------GLK1(2)                              --------->WRKY38(1)         --------->At4g35610 <------MYB83<---------HSFB2a(1)                              --------->WRKY12            <---------At4g35610--------->MYB59--------- ---GT1                      <---------MYB52(1)   <----------DOF2<---------YAB1           --------->HSFB2a(1)   atttgtgttgatatcgactgaaacaaatctcgttggcccaaaacaggcccatctttgagtagctgttttgataacatattaggtaaaccgaaagattccg  27550300     --------->TOE1(3)    ----------->RAV1(2)   ------->TEIL            <---------O2                         ----------->GT1 ---------ANAC58           --------->ANAC55(2)                 --------->HSFB2a(2)           -------- ---------ANAC58           --------->O2                <----------DOF2                      <-------- ------------->AtSPL3      <---------TGA1a            <---------ANAC58           ------->GAMYB ------TEIL                --------->TGA1a        <----------DOF2               --------->bZIP60(2) ------------->AtSPL8      ==================================bZIP_DOF           --------->ANAC58 ------MYB52(1)            ==================================bZIP_DOF--------->ICU4  <---------ALFIN1 ---->LBD16             ------>ZmHOX2a(1)   --------->ANAC46   <---------HSFB2a(2) ----------->RAV1(1) ---LBD16         --------->ALFIN1          --------->HSFB2a(2)>>>>>>>ZML2      --------->ANAC58 ---- >GLK1(2)  --------->TOE2(3)         --------->ICU4   <---------ANAC58          --------->ANAC46 ----   gttcgtacctgaacattagtgtgttcctcacgtttcgcaatgttttccacaactttgcttttgttctagtaaaaattttgcaacgccacacattttcata  27550400                                                              <---------AHL20(1)                                                              --------->AHL20(1)                            <---------MYB52(1)             --------->YAB1     <----------DOF2       --------->TOE1(3)               --------->AHL20(2) <----------DOF2           --------->TOE2(3)             --------->AHL20(2)           <---------GLK1(2) ->YAB1           <---------AHL20(2)                    --------->YAB1  --------->AHL20(2) -YAB1            --------->AHL20(2)              <------ZmHOX2a(1)  --------->HSFB2a(2) ----->ANAC58    --------->AHL20(2)      --------->AtLEC2--------->AHL20(1)      --------->ANAC46   < ----->ANAC58 <---------AtLEC2--------->MYB52(1) <----------ID1      <---------HSFB2a(2)          <--   agcctttctttgttttgcataaaattatcccttaactgattccatgcattgaggacaaaaataatatttttctataaatttctacgcagaatttttgcaa  27550500                                                 <---------YAB1                                                --------->ARR11(3)                                 <-                                                <---------ARR11(3)                                <--                                          <---------MYB59                              <---------AHL20(2)                                          --------->TOE2(3)                         <---------AHL20(2)                                         <---------ANAC55(2)                       --------->AHL20(2)       --------->YAB1              --------->AHL20(2)                              --------->YAB1 --- -------->P   <-------TEIL         <---------AHL20(2)                             <---------YAB1  <-- -----------GT1                   --------->AHL20(2)                      <----------DOF2         --- -------MYB52(2)                  <---------AHL20(2)   ----------->GT1    <---------DAG2       ------   actaacctttcatagattcaatttttcaaaagttttttaaattacctaaatatcattttgtaaattgattcagtcacttttgctattatataaacaaaaa  27550600  Previous    Next  AGI:  At1g73250.1    Description:  ATFX/GER1 (GDP-4-KETO-6-DEOXYMANNOSE-3,5-EPIMERASE-4-REDUCTASE 1); GDP-L-fucose synthase. Identical to GDP-L-fucose synthase 1 (GER1) [Arabidopsis Thaliana] (GB:O49213); similar to GER2, catalytic [Arabidopsis thaliana] (TAIR:AT1G17890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66600.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 27548667    to: 27550096    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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