Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-       --------->ARR14(2)                                                                        ----       --------->GLK1(2)                                                                         ----       <---------ARR14(2)                             --------->At4g35610                       <----      <---------GLK1(2)                               --------->ZAT2                    ---------->DOF2   <------ZmHOX2a(1)        <------ZmHOX2a(1)        --------->GLK1(2)       ---------->DOF2    <---- >ALFIN1          <------NtERF2            ----------->GT1 --------->REM1(2)<------ZmHOX2a(1)   -----   agagaggagaatctggagtcggagaagagaggagagctagtgagacggagaatagaagctgtgaagaatggaagacgaggaaagtgaagagaaaggaaat  27548200                                                                                                    <                                                                                                   --                                                                                                  ---                                                                                         ------>NtERF2      <---------MYB46(3)                                                     --------->TOE1(2)    <--     --------->ALFIN1                                          ----------------->AGL1    <---------MYB46(3) --------WOX13(1)                                              <-----------------AG  --------->ALFIN1 ---->HAHB4                                               --------->ATHB12  --------->ZAT2<------NtERF2 ----->ATHB12                                 --------->At4g35610           --------->At4g35610------ -----YAB1                        >>>>>>>>>TBF1 <---------REM1(1)         --------->DAG2<---------DEAR3(1) -----ATHB12      <------ZmHOX2a(1)           <---------At4g35610        ---------->DOF2--------->ALFIN1 ---->ICU4      ----------->GT1>>>>>>>>>TBF1<---------ANAC46<---------WOX13(1)       <---------DEAR3(1)   gattgaagtggttgagaagaggaaaatgttgaagaagaagaagatggctgatgaaggaatcgattgccagataagaaaagctgcgaagcggtggctcaca  27548300          <---------LBD16          <---------At4g35610          <------NtERF2                   <----------DOF2          --------->At4g35610            <---------ANAC58         ------>NtERF2               <-------GAMYB                           <---------AHL20(2)        <---------ALFIN1            <---------MYB46(3)                      --------->AHL20(1)      ------>NtERF2               <------NtERF2                             <---------AHL20(1)      <---------ATERF1(1)        --------->LBD16                            --------->AHL20(2)      --------->LBD16            <---------ATERF1(1)                        <---------AHL20(2)      <-----------HVH21         --------->ATERF1(2)                        --------->AHL20(2)     --------->ANAC46           <---------ATERF1(2)                        <---------AHL20(2)    <---------LBD16             <---------DEAR3(1)                      <---------AHL20(1)  <---------ARR14(2)            --------->DEAR3(1)                      --------->AHL20(2)      <----  --------->ARR14(2)           <---------LBD16                          <---------AHL20(2)   <------- -----------HVH21         <---------ARR14(2)            <---------YAB1  --------->AHL20(1)   <------- ----->GAMYB--------->LBD16    --------->ATERF1(1) <----------DOF2     --------->AHL20(2)    <------- ------>MYB46(3)          <---------ICU4 <---------ANAC58     <---------TOE1(3)              <------- ----------AtMYB77        --------->ARR14(2)      <---------DAG2       <---------AHL20(2)    -------- --->MYB46(3)   <------ZmHOX2a(1)------>NtERF2 ---------->ID1 <---------TOE2(3)              <-------   accgtctccggcaccggaggagaaggcataatcgccggcgattgcttttgccccttttgtgattaaggttttattaaattaatttgaaatgagtttcgtg  27548400                         --------->TGA1a                         <---------O2                         --------->ANAC55(2)                         --------->O2                         <---------ANAC55(2)                  --------->ZAT14                  --------->REM1(2)                 <---------MYB52(1)               <---------ANAC58               <---------ANAC46               <---------ANAC58              <------NtERF2        <---------At4g35610      <---------WRKY18(1)=================================================bZIP_DOF   <---------ANAC58    ------------->DYT1   <---------ANAC58    <-------------DYT1 -------HVH21 <---------DEAR3(1) --ANAC58    ------>NtERF2                                                                    <------ --ANAC58  --------->ATERF1(1)                                              <--------P      --------- --ANAC55(2)--------->TCP20                                                <-----------HVH21------>NtERF2 --ANAC46--------->ALFIN1<---------TGA1a                                <-----------RAV1(2)--------->DEAR3(1) ->ANAC55(2)<---------PCF5           --------->MYB52(1)               --------->CCA1(2)  <---------At4g35610 --ANAC55(1)<---------PCF2 ----------->HVH21      >>>>>>>>>TBF1---------->DOF2           --------->At4g35610   tcagagcttgagcggggccgtgaagtcaagtgactgagccaacgaagacgaagaagaaggtaagcgaaagagagacaggttagggctagtgagccgcgtt  27548500                                                    --------->ATHB12    --------->ANAC46 <---------ANAC58               <---------ICU4    --------->ANAC58 <---------ANAC46               --------->ATHB51             *TSS    --------->ANAC58 <---------ANAC58              --------->ICU4  <---------ANAC58  --------->GLK1(1) ----DOF2  --------->TOE2(3)                       <---------YAB1  <---------ANAC58--------->YAB1 >LBD16    <----------DOF2                <------NtERF2   ---------->ID1       <---------AtLEC2   ttgttcacgctatctttaacaaggcttgtgtaagcccattgggccgagaattcattatttgtcattttagcgttgcaacttgcaaggatagccaaattag  27548600                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                     <------ZmHOX2a(2)                                                                                     --------->CCA1(2)                                                                                     ================                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                                                    --------->AGP1                                                                              <---------LBD16--------                                                                  -------->HAHB4    <---------ARR14(2)  --------->GLK1(1)                                               --------->YAB1    --------->ARR14(2) --------->ARR11(3)                     --------->YAB1           <---------YAB1    --------->GLK1(1) <---------ARR11(3)                    <---------YAB1       <---------At4g35610    <---------GLK1(1)   tgagatatcaaatgtttttcttgaaacttcttacaactgttttgataatttgtatagaagagagctaataatagaccatactcggagatccaaaattaaa  27548700                                                                              ------->TEIL                                                                             <---------GLK1(2)  ------>ZmHOX2a(1)                                                          <---------CCA1(2) --------->TOE2(3)                                                        <---------HSFB2a(2) ----YAB1              --------->ANAC58                           --------->ANAC58 ---AHL20(2)      ---------->DOF2                                 --------->ANAC58         ---------- -->AHL20(2) <---------ANAC46      --------->ZAT6    <---------YAB1       --------->HSFB2a(2) ------- ========HOX2a_HOX2a   --------->ANAC58      ------->TEIL       ---------->DOF2           ----------- ->AHL20(2)  ----------->GT1    <---------CCA1(2)  --------->YAB1--------->DAG2    ---------->DOF2 --   attcctcagacaatgttgtataaagaagcaagtcttatctctaaatgaatcaattttgataaaaaaaaaagcaattctcgaatctcaaagaaaggtttaa  27548800                         --------->TOE2(2)                         --------->TOE1(2)                        ----------->RAV1(2) ->GT1 ----------->GT1<<<<<<<<<GT-1 -->AHL20(2)   <---------At4g35610                                                 <---------ATHB12 - >GT1 --------->ALFIN1<-----------GT1                                      <---------MYB46(3)       - ------->YAB1  --------->At4g35610        <---------ANAC46              --------->MYB52(1)         --   atcacaatgtggtgataagctgatttacctgagactcaatagttgtgtatatatgagaagagaaaccattaacttatcggttgcaaacattcttcaaata  27548900                                                    ---------->DOF2                                                  ------->GAMYB                                                -------->P                                                ------>MYB46(1)                                  <---  --------->YAB1                                ------>MYB83         --------->At4g35610         ---- <---------ATHB12                       <---------ANAC58             --------->ZAT2              ---- ----->MYB46(1)                         <---------ANAC58             <---------At4g35610  --------->ALFIN1 ----->MYB83                        --------->TOE2(3)           <----------DOF2        <---------DEAR3(1) ------->WOX13(1)                   --------->TOE1(3)         <---------ZAT2          ------>ZmHOX2a(1)   ccaatcataagtttggctcagaccatctctaagagaaaccttaggtgtccaacccaaagacgcgagctttgagctgtccataagtttcctcggtgtgcca  27549000                                               <----------DOF2        <---------ZAT14                   -------->P        --------->ZAT18                 <---------MYB111(1)        <---------ZAT18                 <------------MYB.PH3(2)        --------->ZAT14                 <---------MYB55(2)  <---------ANAC58                     ------>MYB83  --------->MYB46(3)  <---------ANAC46    <---------ZAT2   ------>MYB46(1)  <---------ANAC58    --------->HSFC1(2)--------->MYB46(3)  --------->At4g35610                   --- ------At4g35610      <---------HSFC1(2)<---------MYB111(2) <---------At4g35610                   --- ------->RAV1(2)      --------->HSFB2a(1)------->GAMYB ------>MYB46(1)    --------->YAB1<---------ALFIN1 ----->At4g35610      --------->ZAT2--------->MYB46(3) ------>MYB83    --------->YAB1<---------WRKY18(1)   tctggcttagtgcaatcccatccaagcttcccttcaaaaccaacaacctctttcaccaactcagccaactctctaatagtcacttcttgaccacttccaa  27549100  Previous    Next  AGI:  At1g73240.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO69427.1) Range:  from: 27545848    to: 27548581    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g73250.1    Description:  ATFX/GER1 (GDP-4-KETO-6-DEOXYMANNOSE-3,5-EPIMERASE-4-REDUCTASE 1); GDP-L-fucose synthase. Identical to GDP-L-fucose synthase 1 (GER1) [Arabidopsis Thaliana] (GB:O49213); similar to GER2, catalytic [Arabidopsis thaliana] (TAIR:AT1G17890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66600.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 27548667    to: 27550096    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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