Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------             <---------AHL20(2)                           ------->GAMYB                      --------            <---------AHL20(2)                          --------->ANAC58                    ---------            --------->AHL20(2)                          --------->ANAC58                <---------ZAT14           <---------YAB1           --------->YAB1      --------->ANAC46            --------->YAB1        <---------YAB1           ----------->GT1      --------->MYB46(3)      <------ZmHOX2a(1) <----      <---------ZAT6    --------->YAB1--------->ICU4<-----------GT1     --------->ZAT6  --------->ZAT14      ----------->GT1  <---------ATHB12          --------->YAB1    --------->ATHB12<---------YAB1   aactaatactgttattaattagccaatgacaaaaacagtaatactgagcaatagtcacaacccacaaattgattacactaggattatgagaacagtgcag  27545200                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                             <-------                                                                                             <-------       ---------->DOF2                                          <------MYB46(1)              <-------   <----------ID1                                   <-----------GT1   <---------ICU4         <------- --ZAT14                              ---------->DOF2           <------MYB83               <--------- ->ZAT14          ----------->GT1   --------->TOE2(3)          --------->MYB59   <---------ICU4  <--- >ALFIN1          <---------ZAT6    --------->TOE1(3)    <---------ATHB12        --------->YAB1------ -----------------WRI1       --------->At4g35610 --------->AHL20(2)  <---------YAB1    <----------DOF2   cgagaagaacaaagctcgtattgttacaatgagcttaacctaaagtttcaattttttcaatcgattaggtcaccattacacaaacattacttttaactaa  27545300 ------->MYB52(1) ------MYB46(2) ------MYB52(2) --MYB46(2)                                                                                      <--- -----MYB.PH3(2)                                          --------->TOE2(2)                   <------ --MYB59                                        --------->YAB1                                ------>ZmHOX2a(2) --MYB52(2)                                    <---------ATHB12       ===============================HOX2a_HOX2a --GT1--------->ATHB12                       --------->WOX13(1)       <------ZmHOX2a(1)     <-------- ------MYB111(1)        --------->MYB46(3) <---------YAB1 --------->TOE1(2)                 --------- --->MYB52(1)       <---------ARR11(3)     <---------ATHB12     ------->TEIL          --------->AHL20(2)   ctaacaagttattggaaaacaagataaccaatatcaaaaacagtaatcaatgaaaaaaaacatatgaatcgaggaagaacaaaaacaaaaaaatgatctt  27545400                                <---------ARR14(3)                                --------->ARR14(2)                   <---------ZAT18                                <---------ARR14(2)                <---------TGA1a                                --------->ARR11(3)      --------->ATHB12<---------ANAC58                                <---------ARR11(3)   <---------DOF5.7(2)<---------ANAC58 ------WRKY18(1)                --------->ARR14(3)  <---------ZAT14  --------->ZAT18 ---ICU4                       --------->GLK1(1)    --------->ZAT18 --------->ALFIN1 -ARR11(3)        ----------->GT1              --------->ICU4--------->At4g35610 >ARR11(3)   --------->YAB1    <---------CCA1(2)--------->ATHB12  <---------O2 ----------->GT1   gacccttgtgctaaatcagaaggaaacaatcgaatatcttggaaatgaaatgagtgaacgatttgctgaagtgggcttaccttgttaatcgatttctagg  27545500                                                                       --------->ATERF1(1)                                                                       <------NtERF2                                                                      ------>NtERF2                                                                     <---------DEAR3(1)                                                                    --------->RAP2.3(1)                                                                    <------NtERF2                                                                   <---------DEAR4(2)                                                                   <---------ORA47(2)                                                                  <---------DEAR3(1)                                                                  <---------RAP2.3(2)                                                                --------->ANAC46                                                            --------->CCA1(2)                                                            <------ZmHOX2a(2)                                                           --------->ARR11(3)                                                           --------->AGP1       <------MYB83                         <---------ZAT14<---------ARR11(3)                --------       <---------MYB46(3)       --------->DAG2            <---------GLK1(1)          --------------->AGL15       <------MYB46(1)         --------->MYB52(1)         --------->GLK1(1)         -----------------      <---------AtMYB61       --------->CCA1(2)   =================HOX2a_HOX2a    <-----------GT1     <---------MYB52(1)      --------->ARR11(3)   <------ZmHOX2a(1)<---------RAP2.3(1) <----------DOF2   gttcttcgttggtcgaagggtataagaagaagataagggaagagagaacagaggagagagagatccaagcggcgctggagggttttgccctttaagtaaa  27545600                                                      --------->YAB1                                                      <---------ICU4                                                 <---------AHL20(2)                                               <---------YAB1                                              <---------AHL20(1)                                              <---------AHL20(2)                                              --------->AHL20(1)                                              --------->AHL20(2)                                             --------->AHL20(2)                                             --------->YAB1                                            <---------YAB1                                          -------->ATHB1                                          --------->ATHB51                =============HOX2a_HOX2a                                          --------->YAB1                  ------>ZmHOX2a(2)                                          <---------ICU4                 ==============HOX2a_HOX2a                                          <--------HAHB4          <-----------HVH21                 -                                         <---------ATHB51       --------->MYB46(3)                  -                                         --------->ICU4     --------->MYB46(3)                      -                 <-----------ARR10   ------------>CBF<---------ATHB12    <------ZmHOX2a(2)          -     *TSS       --------->WOX13(1) --------->ZAT14 --------->WOX13(1)   --------->ARR11(3)          -  <---------ANAC46       <----------DOF2 <---------YAB1 <---------YAB1  <---------ARR11(3)<---------YAB1 ->AHL20(2)   ------------>CBF     <---------ZAT14 --------->YAB1------->GAMYB          <-----------GT1 >AGL1   <---------REM1(1)    --------->MYB46(3)--------->YAB1--------->MYB52(1)------>ZmHOX2a(1) <--   tgcgatgtgtaatgtagccaatctaagctttaaccactatacaattattatattaatcatcatccaacggtcacgatctctccttcgatattactattag  27545700                                                                               <---------At5g28300                                                                           >>>>>>>>>>AtMYB44                                        <---------------AGL15              --------->MYB59        <---------PCF2                  --------------->AGL15              --------->MYB111(1)        --------->ZAT18                 <---------YAB1                     --------->MYB46(2) ------>NtERF2                         <-----------------AGL2              --------->MYB52(2) -------->ANAC58                       <-----------------AGL3           ------------>MYB.PH3(2) -------->O2                           ----------------->AGL3    <---------ANAC55(2) -------->bZIP60(2)                  --------->GLK1(2)           <---------ANAC46 -------->ANAC46                    <---------ARR14(2)           --------->ANAC55(2) -------->ANAC58<---------AHL20(2)  <---------GLK1(2)            <---------ANAC58  <---------MYB52(1) -------ALFIN1 <---------ATHB12     --------->ARR14(2)           <---------ANAC58<---------ZAT6   ccacgccatgggccctaataaatctctggcccatttcagattctaattttggtttccttcgtaaattgcgtaagagttagttactgttaagcatatagag  27545800                    <---------ATHB12               --------->ANAC55(2)              <---------TOE2(3)            <---------AHL20(2)                    <---------TOE2(3)    --------->HSFB2a(2)           <-------TEIL   ---------->DOF2    <---------HSFB2a(2)   --------->CCA1(2) <---------YAB1             <-----------GT1  <---------At4g35610    <---------ARR11(3)-------->P             --------->AHL20(2)  --------->At4g35610--------->YAB1   <-----------ARR10           <---------AHL20(2)           ------   agtcttctgcaaaatttatgtaatcaagatttaagatgcaaaacttaccattaaagtttgattcttatataattttctagtttaccaaaaacaagattaa  27545900                                                                                                    -                                                                                                    <                                                      --------->ANAC55(2)                         <--                                                      <---------ANAC55(2)               <---------At4g35610   <<<<<<<<<CBP60g             <-----------GT1        ----------->GT1       <---------DAG2        ---   <<<<<<<<<SARD1      --------->GLK1(1)    <---------DAG2                  <----------DOF2      <--- --->KAN4(2)           <---------GLK1(1)    <----------DOF2    --------->ARR14(2)       <---------ZAT2   tcccaaatttctgcaaaatcgagggatttcattttccaatacaaggctttttgatcatgtaacaaaatactctagttcctttttctatccagctcttgaa  27546000   --------->bZIP60(1)   <---------bZIP60(1) --------->YAB1                      ------->TEIL <---------ICU4                     <-----------GT1 -------->ICU4                   <---------------AtSPL3 ---------YAB1                   --------------->AtSPL8 -------ICU4          <---------AHL20(2)                                    --------->ARR11(3) ------>YAB1         --------->AHL20(2)   <----------DOF2 --------->ZAT2    <---------ARR11(3) ------ATHB12<-----------GT1  <------ZmHOX2a(1)           <---------ZAT2<------ZmHOX2a(1)    <------ZmHOX2a(1)   tcatgatgacacttgttaccacatttaatcgaggaattgtacctctttaatcttccatcaagcttggaactcgaggaagagcttaagcttctgtaggagc  27546100  Previous    Next  AGI:  At1g73230.1    Description:  nascent polypeptide-associated complex (NAC) domain-containing protein. similar to nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G17880.1); similar to putative transcription factor BTF3-like [Solanum tuberosum] (GB:ABB87130.1); contains InterPro domain Nascent polypeptide-associated complex NAC (InterPro:IPR002715) Range:  from: 27543889    to: 27545605    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g73240.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO69427.1) Range:  from: 27545848    to: 27548581    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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