Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <-------TEIL                               <-------MYC2                               ------->MYC3                               <-------MYC3                         --------->ANAC58                  --------->ANAC58                  --------->ANAC58                  <---------ANAC55(2)                  --------->ANAC55(2) <---------MYB46(3) <---------AHL20(2)       --------->AHL20(2)--------->ANAC58           <---------AHL20(2)                        ------- --ZmHOX2a(2)----------->HVH21 ------->MYC2         <---------YAB1                    ------>ZmHOX2a(1) --YAB1--------->YAB1    --------->ANAC46    --------->ANAC46 ----------->GT1 <-----------RAV1(1)----   cgatcgaaataatatttgacaagtatcaagccacatgcattggttacacatcatattattcaatttgtaattttagctatgtgttgtcctcatgcatcat  27541500                       --------->ANAC58              <---------ANAC46      <---------AHL20(2)                       --------->ANAC58             ---------->ID1        --------->AHL20(1)                       <---------ANAC55(2)      <----------DOF2           <---------AHL20(2)                       --------->ANAC46  --------->TOE1(3)                --------->ARR11(3)             <----------DOF2  --------->AtLEC2 --------->TOE2(3)          --------->AHL20(2)         ---------->ID1--------->ANAC55(1)  --------->ARR14(2)            <---------ARR11(3)  <---------AHL20(2)<---------REM1(2)    ------->GAMYB                    <---------AHL20(1) <---------AHL20(2)<-----------HVH21     --------->TOE2(3)          <-----------GT1 --------->AHL20(2)<-----------TGA1      --------->ANAC46       <----------DOF2 -->YAB1<-----------GT1--------->ANAC55(2) <---------MYB52(1)<-----------GT1   <---------AHL20(2) ----->AHL20(2)   --------->ANAC46      <------------AtMYB77 <---------AHL20(2)--------->AHL20(2)----   aaattttttttttctctttctcgtcacgcatcatgcattctaaccgtaacctttgtcgtttattttctttttccaatatatttaaaattagtgggaacta  27541600                    ----------->GT1           <-------GAMYB          <-----------RAV1(1)          --------->MYB52(2)          <---------MYB46(3)          --------->MYB55(2)        <---------MYB52(1)      <---------ANAC58      <---------ANAC58      <---------ANAC55(1)      --------->ANAC55(2)      <---------YAB1<----------ID1       --------->ETT(2)      <---------ANAC46                   <---------ETT(2)                               ---------->DOF2      <---------ANAC55(2)    ----------->GT1          ---------->DOF2               <----------ID1 ------>DOF2      ---------->DOF2<-------TEIL  ---------->DOF2            --------->AHL20(2)   aaagagttacgtttgttgcaaaaagaaaaatgagttacatttgtagacaaaaagatgaaagagaagtatagacaaataaaacaagaaggaaaaagagaga  27541700                                                                                                    <                                                                                                   --                           --------->YAB1                                  <---------YAB1          --                         ---------->DOF2                                 --------->YAB1           ---                       --------->YAB1                                    <---------ICU4    ------->MYC3                  --------->ANAC55(2)                                   <---------YAB1     ------->MYC2                  --------->ANAC58             <---------YAB1          --------->ARR11(3)  <---------                  --------->ANAC58            <---------ARR11(3)       <---------ARR11(3)  <-------MYC3                  <---------ANAC55(2) <----------DOF2          ----------->GT1             <-------MYC2              <-----------HVH21 --------->ICU4--------->ARR11(3)      --------->YAB1     ------->TEIL   gttgcatttttgttaatgtcacgaatcaaaagtaattcttcttttcaagataattgaatttagagttgtaaatgatcatgagaacttaatgaacgtgtac  27541800        --------->MYB52(1)        ----------->RAV1(1)     --------->ANAC58     --------->ANAC46                                                                        --------     --------->ANAC58                                                                       <-------- --------->YAB1                                ----------->GT1                          <----------DOF2 ---------ATHB12                             <------------CBF  <---------AHL20(2)       <---------DAG2 ---->MYB83                             ----------->GT1--------->ANAC58                <---------ANAC58 ---->MYB46(1)                         ----------->GT1 --------->ANAC58                <---------ANAC58 ------>WOX13(1)        ----------->RAV1(1)<---------AHL20(2)  --------->AHL20(2)  <------------CBF ------AtSPL8  --------->AHL20(2)    ---------->DOF2   --------->ANAC46         ------------>CBF    <   caatcaaacgcaacagataatatagacaacacaatataagaaagttaaattgtttatacgaaaattttaatgactcggtatgcacaattgctttttgatt  27541900                                                                                                  ---                                                                                                  <--                                                                                                  ---                                              <-------MYC3                                   <-------   <---------YAB1                     --------->HSFB2a(2)                                    -------- ->ATHB12                             ------>ZmHOX2a(1)                               --------->WOX13(1) -YAB1                            --------->ANAC46     <-----------GT1              <---------ATHB12 ---------AHL20(2) <------------CBF  *TSS     ------->MYC3                        --------->WOX13(1)   agtttattagagagagtgagaaattggatgcaaaacactcctcgaccatgtgtatatataccatcgctaacttaagacatatatcaatcaatcccacaaa  27542000                                                                                            ------>MYB46(1)                        ----------->RAV1(2)                                                 ------>MYB83                        ====================RAV                                           <---------MYB46(2)                      <---------ALFIN1                                                    --------->DEAR3(1)                   <-----------GT1                 --------->TOE1(3)                      --------->MYB46(3)               --------->ARR11(3)                 <---------HSFB2a(1)                     <---------MYB55(2)               <---------AHL20(2)                 --------->HSFB2a(1)                    --------->ANAC46 ------>TOE2(3)<---------ARR11(3)                 --------->HSFC1(2)                   <---------ALFIN1 -------MYB59  --------->AHL20(1)                 <---------HSFC1(2)                   --------->DEAR3(1) ------>TOE1(3)<---------AHL20(1)       --------->YAB1                                 --------->AtMYB61 --MYB52(2)    --------->AHL20(2)  --------->TOE2(3)                                  --------->MYB46(3) ->MYB46(3)   --------->AHL20(2)----------->RAV1(1)--------->TOE2(3)  ---------->DOF2 <---------ABI4(2)   cctaaattgaaaacaaatatatttccacctgaaacaacataaacagaatggaaccttcaaaacaagaagttccaaagctcatggagacaccaccgaacat  27542100                                                        <---------ATHB12                                                       ------>MYB46(1)                                                       ------>MYB83                                                     --------->MYB46(3)                                                     <---------MYB59                                                     <---------MYB46(2)                                                   -------->P                 ----------->HVH21                                                <---------At4g35610    ----------->HVH21                  ------->GAMYB                 --------->ZAT2        --------->ANAC58                 --------->MYB46(3)         ----------->RAV1(1)   --------->ANAC58          ---------                -------->P    --------->ANAC58  --------->At4g35610   --------->ANAC58      ---------              --------->MYB46(3)           --------->MYB46(3)     --------->ANAC58        ------>ZmHOX2a(2)             --------->At4g35610         ----------->RAV1(1) <---------------AtSPL3   ----------->HVH21             <---------At4g35610     --------->ANAC58<---------MYB111(1)    <---------At4g35610            --------->ANAC46  --------->ANAC58--------->MYB46(3) <-------TEIL --------->WRKY12   <---       <-------TEIL   ---------->DOF2--------->ANAC58<---------MYB111(2)    --------->At4g35610------   atcaaacgattcatcagcaaccgagaaaggagaagcaacaaggcaacaacagctaccaaacaataggtacgcactcacagttgacgaggtgatcgagcaa  27542200                              <---------ANAC58                              <---------ANAC58                              <---------AtLEC2                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                 ------>ZmHOX2a(2)                        --------->ARR14(2)                <---------GLK1(1)                        <---------ARR14(3)               --------->ARR11(3)                        <---------ARR14(2)               <---------ARR11(3)                        <---------AGP1                   <---------ARR14(2)                        --------->AGP1                   --------->ARR14(2)      <---------ZAT18   --------->ARR14(3)              <---------CCA1(2) >ANAC58                --------->ARR11(3)             ----------->ARR10           <-----------GT1 >ANAC58                <---------ARR11(3)          <---------ANAC58              <---------CCA1(2) ------ALFIN1          <---------CCA1(2)            <---------ANAC58     --------->ZAT14 ----->RAV1(1)        ----------->ARR10             <---------ANAC46     <---------ZAT18   cacattggagcacttgggtttgctcagatcttgcatgctctcttggtctctatcgcttggatcttcgatgctcagaccactcttatatccattttctccg  27542300                --------->HSFB2a(1)                <---------HSFC1(2)                --------->HSFC1(2)            --------->DEAR3(1)           ------>NtERF2           <------NtERF2          ------>NtERF2                                 <---------ANAC58         <---------DEAR3(1)                 <---------ANAC58        <------NtERF2                       <---------ANAC58     >>>>>>>>>>>>>>>>>LFY        <---------LBD16                    <---------DEAR3(1) <---------WOX13(1)        --------->ATERF1(1)                <---------MYB46(3)<---------ARR14(2)        --------->At4g35610               <---------ANAC46   --------->ARR14(2)        --------->LBD16          <------NtERF2          <---------ANAC46        <---------At4g35610     ------>NtERF2   --------->ATERF1(1)    --------->ZAT14       <---------ATERF1(1)      --------->ABI4(2) ------>NtERF2  <<<<<<<<<<<<<<<<<LFY    --------->ZAT2         --------->MYB46(3)  <---------ATERF1(1)    --------->ALFIN1              -  ---------->CDC5         -------->P <---------ANAC46   <---------ANAC58                         ----   atgctcagcccgcggcgaggcttcttgcaaccggtgccatcgtggagggtgcctccttgtgtggattggccagtggagaatgggaatggattggaccaaa  27542400  Previous    Next  AGI:  At1g73220.1    Description:  ATOCT1 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER1); carbohydrate transmembrane transporter/ carnitine transporter/ transporter. similar to ATOCT2 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER2), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G79360.1); similar to putative organic cation transport protein [Phaseolus vulgaris] (GB:AAO83155.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (I Range:  from: 27541937    to: 27543896    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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