Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->ZAT2                                        ------>ZmHOX2a(2)                                       --------->CCA1(2)                                       --------->At4g35610                                       <------ZmHOX2a(2)                                       <---------At4g35610       --------->HSFB2a(2)            --------->AGP1--------->At4g35610       <---------HSFB2a(2)            <---------ARR14(2)       --------->ANAC46               --------->ARR14(3)                 <---------ARR14(2)         -       --------->LBD16                <---------ARR11(3)   --------->REM1(1)                       --      <---------HSFB2a(2)           ----------->ARR10  --------->At4g35610--------->CCA1(2)        <-      <---------LBD16            <-----------HVH21  <---------At4g35610  --------->ARR14(2)        <-      --------->HSFB2a(2)       <---------ANAC46   ----------->RAV1(1)  =============================  <----------DOF2           <---------ZAT2  <---------ANAC58            ============================= ----------ARR10    --------->CCA1(2) --------->ARR11(3)   --------->MYB46(3)                   ----- --------ARR11(3)  --------->ARR11(3) --------->ARR14(2) ----------->RAV1(1) ----------->GT1   <----- ------->ARR11(3)  <---------ARR14(2)<---------GLK1(1)--------->RAP2.6(2)--------->ARR11(3)   <------ --ZAT18       <-------TEIL --------->ZAT2  <---------ANAC58       --------->ALFIN1  --------->MYB46(3) --ETT(2) ---------->DOF2   --------->At4g35610  <---------At4g35610    <------ZmHOX2a(1)     ------- >ALFIN1--------->LBD16     <---------At4g35610  --------->At4g35610  <---------ANAC46       <-------   aaatctttcccggaaagtacagatatagtaagctgggtgagatctgccttgagcagcagcaacaacaatgtggaggatatggtaacaacaatcgtcgatc  27491500                                                                                        --------->LBD16                                                                                      <---------LBD16                                                                                      ------>ZmHOX2a(2)                                                                                     --------->ARR14(1)                                                                                     --------->CCA1(2)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR11(1)                                                      --------->bZIP60(1)           <---------ARR14(3)                                                      --------->ANAC55(2)           --------->ARR11(3)    <---------ANAC46                                  --------->ANAC58              --------->ARR14(3) -------->GLK1(2)                                     <---------ANAC55(2)           --------->AGP1 ------->ARR14(2)                                     <---------bZIP60(1)           <---------ARR11(3) --------ARR14(2)                                     --------->ANAC58              <---------ARR14(2) --------GLK1(2)                                    --------->MYB52(1)    <---------REM1(2) ==HOX2a_HOX2a                                     ----------->TGA1       --------->ZAT18 =HOX2a_HOX2a               <---------ZAT6--------->ALFIN1--------->ZAT2  --------->ZAT14           - ->ZmHOX2a(2)        <---------ARR14(2) --------->At4g35610               <---------ZAT14<----------- -ZmHOX2a(2)         --------->ARR14(2) <---------At4g35610<------------AtMYB77     --------->ARR14(2) ---ARR14(2)      <---------HSFB2a(2) <-----------RAV1(2)<---------ARR14(2)       ----------->ARR10-- -->ARR14(2)      --------->HSFB2a(2)<---------At4g35610 --------->ARR14(2)  --------->ANAC46      -- --DEAR3(2)    --------->GLK1(2)     <---------ZAT2----------->HVH21  <---------------AtSPL8  -------   cgattctcgtggacgagcttctggattcgagtcttagggagcaggtgatgcaagtgacggaactggcactgagttgtacacagcaagatccggcaatgag  27491600                                                        --------->At4g35610                                                        <---------At4g35610                                                     --------->HSFC1(2)               <---------ANAC46                      <---------HSFC1(2)              <---------DEAR3(1)                     --------->At4g35610  <---------ATHB12                                   <---------At4g35610                          --- ------>MYB83<-------TEIL                           --------->GLK1(2)     <------MYB46(1)         --- ------>MYB46(1)       <-----------RAV1(1)       --------->ANAC58         <------MYB83       -------- -------->MYB52(1)     ===============================RAV                --------->MYB46(2)  <------- ----------WRI1----------->GT1            --------->At4g35610            --------->MYB59<----------DOF2 ------->AtMYB61 ----------->HVH21        ----------->RAV1(2)<---------At4g35610    <---------MYB52(1) ------->TOE1(2)--------->At5g28300      --------->ARR11(3)  ------>ZmHOX2a(1)    ----------->GT1 <-- -->YAB1  --------->CCA1(2)      ----------->GT1 --------->ANAC58      <---------MYB52(1)    --------   accaacgatgagagatgcggtgaaactgttggaagatgtgaaacatctggcaagaagctgctcctctgattcagttcggtaatctcgttactttgtgcag  27491700                                                 -------->P                                                 --------->MYB52(1)                                               <---------SPL7                                               <----------DOF2                                       --------->ARR14(2)                                       --------->MYB52(1)                                       <---------ARR14(2)                                    --------->ANAC55(2)       ----------->GT1              --------->ANAC58     <------ZmHOX2a(1) ----------------------->TaNAC69(2)                             <---------ANAC46 ------>ZAT14         <-------GAMYB <---------ANAC55(2)     ------->TEIL              <---------ANAC58 ------>At4g35610    <---------ZAT6 --------->ANAC58--------->LBD16       ----------->GT1 ->ZAT14          <------ZmHOX2a(1)<-----------------------TaNAC69(2)    <---------TOE2(3) --ZAT14      --------->MYB52(1)  <---------DOF5.7(2)<---------MYB52(1) --------->YAB1<---------ANAC58 -------ZAT14 ---------->DOF2 <---------ZAT6  <---------ANAC58         <---------ATHB51 ->ZAT18<------ZmHOX2a(1) <---------YAB1      <---------ANAC58         <---------ATHB12  <-----------   agcagaaggaggaaactaaaggactgttatcagtggtaacgtaactgggcttaccggtaatgtaactgggccaataatgtaaaatatggcttattgaagg  27491800                         <------------AtMYB77                    --------->YAB1                --------->AHL20(2)                <---------AHL20(2)              <----------DOF2                                                                --------         ------>NtERF2  <---------At5g28300                                     <---------YAB1        <---------RAP2.3(3)                                                   *TSS       ---------->DOF2        <---------RAP2.6(2)                    <---------ARR11(3)            --------->AHL20(2)       --------->RAP2.6(3)------->GAMYB        --------->ARR11(3)            <---------AHL20(2)   ---   <---------ICU4 <------------CBF          --------->AHL20(2)               <---------AHL20(1) <---- -CBF----------->HVH21 <-----------GT1      <---------AHL20(2)           ------>ZmHOX2a(1)--------->DAG2   cccaaatatgacggccctttaattgtaaccgtgtttgtttgtgaaataaaatctcgtttatcaaatttctgtttcctattttatttttaaaaaaagtgtt  27491900                                                                                 <-------GAMYB                                                                                <---------MYB46(3)                                                                               <---------DEAR3(1)                                                                              <---------MYB52(1)                                                                              --------->ATERF1(1)                                      <-------TEIL                           <---------ORA47(2)                                     <---------ARR14(2)                      <---------DEAR4(2)                           --------->ARR14(2)                                <---------ATERF1(1)                     XXXXXXXXXXXXXXXXXXXX>MIR774B                 <---------MYB52(1)                    --------->At4g35610   <------ZmHOX2a(1)      --------->LBD16<---------DEAR3(2)                  <------NtERF2     <-------GAMYB  <---------ANAC46          ------>NtERF2                 --------->LBD16   <---------DEAR3(2)    --------->ANAC46   <---------RAP2.6(2)        <---------ANAC58   <---------ARR14(2)      <---------ANAC58         --------->ATERF1(2)        <---------ANAC58 <---------YAB1<-----------RAV1(2)     <---------LBD16<------NtERF2 ->ALFIN1 <---------MYB52(1)--------->CCA1(2)      <---------ANAC58         <---------ATERF1(2)     - -------->GT1    <------NtERF2     <---------MYB46(3)   <---------LBD16     <---------DEAR3(1)     -- -----ANAC46   <---------LBD16    <---------DEAR3(1)<----------DOF2        <---------ORA47(1)     <--   gggaaaattttcgtttggccggagatgaagataggggcggttcaggagagttggcttatacggactccggtacttaggccggcggttcaaggctcaattc  27492000                        <---------ARR14(2)                <---------At4g35610                                                                 <                --------->At4g35610                                                                 -            --------->DEAR3(1)                                                                    <--            --------->RAP2.6(2)                   <---------ARR11(3)                              ---        <---------GLK1(1)                  --------->At4g35610                                    <--       ---------->DOF2  --------->ARR14(2) <---------At4g35610                                    --- <------NtERF2  <---------ZAT2           <---------ZAT18                                   <---------ARR11(3) -------->LBD16 --------->ZAT2  <---------HSFB2a(2)                                  --------->ANAC58 ------->LBD16<------NtERF2     --------->HSFB2a(2)     <----------DOF2              --------->ANAC58 -------LBD16--------->LBD16------>ZmHOX2a(1)     --------->ARR11(3)    <---------AHL20(2) --------->ARR11(3)   gccggaatggaaagccgcagcttgagtttcctctctcgaacagtgagcttaagctcttctttcttccattgaattttttttttgggaacgcattatcttg  27492100 ---------ZAT18                                                                           <---------- -------->ZAT18                                              ------>ZmHOX2a(1)      <---------ANAC46 -------ZAT14                                              <---------ANAC58        --------->ATHB12 ------>ZAT18                               ---------->DOF2<---------ANAC58       <---------YAB1 -------ZAT18                   <---------TOE1(3)    <---------MYB52(1)      <---------ANAC58 ------>ZAT14                   <---------TOE2(3)  ----------->GT1           <---------ANAC58   tgcacacttgtagtaacttggtctatatcaaattgaggttgaagatgaaagttcagttatttcctgtgatttgcaatttccttgttgattgtatgttgta  27492200                             ---------->DOF2                                                   <-----                       <----------ID1                                                         <------                  ---------->DOF2                           --------->AHL20(2)             <---------ANAC58               <---------ANAC55(2)                          <---------AHL20(2)             <---------ANAC46            --------->ARR14(2)                           ----------->GT1                   <---------ANAC58 -RAV1(1)   <---------ARR14(2)--------->DAG2   ----------->ARR10         <-----------GT1<---------MYB52(1)   tttgagtcttgttggatatgtaaagagaacaaaaagagagtgagagagtgagatttgtgtgataaattttggattttacagggttgtctcgttgtgtggt  27492300                           ------->TEIL                        <---------YAB1                      --------->CCA1(2)                                                   ------->TEIL   <---------MYB46(3)--------->ARR14(2)                                ---------->DOF2    --------->GLK1(2) --GAMYB             <---------ARR14(2)                        ------>ZmHOX2a(1) <-----------RAV1(1) ---MYB46(3)        <------ZmHOX2a(1)  ----------->GT1------->TEIL<---------ZAT6<---------TOE2(3)   tatggctgttcaaggagggagaggatatgaatctccatgggatgaaaaaccctatgaaactcttcctactggtaaaagggtttatgttgatgaatctgat  27492400  Previous    Next  AGI:  At1g73080.1    Description:  PEPR1 (PEP1 RECEPTOR 1); ATP binding / kinase/ protein binding / protein serine/threonine kinase. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G17750.1); similar to protein binding [Arabidopsis thaliana] (TAIR:AT1G73066.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63930.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69176.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23192.1); similar to Receptor-like protein kinase precursor (GB:P93194); contains InterPro domain Protein kinase, core; (InterPro:I Range:  from: 27488174    to: 27491862    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g73090.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO23197.1) Range:  from: 27491878    to: 27494427    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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