Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ICU4                             --------->ANAC58   <---------YAB1                             --------->ANAC58 --------->YAB1                           ---------->DOF2   <---------ATHB12                    --------->ICU4          ------->TEIL                                            -                  --------->WOX13(1)     <---------YAB1          ------>ZmHOX2a(1)               ----               --------->ANAC58    --------->ZAT14<---------ANAC58     ---------->DOF2           <--- >ATHB12       --------->ANAC58    <---------ZAT14<---------ANAC58  <---------ANAC46         <------ZmHOX2a(1)   cggttccaactaaaacgaagcaattagtagaaagcactgaagtatgaatcatgcttaccttctcgtcctgaggtatagcagaaggtagagactgaggagt  27465700                                                                ----------->RAV1(1)       <---------ZAT14                              --------->ANAC58    --------->ANAC58       --------->ZAT14                   <---------ETT(1)   <------ZmHOX2a(1) ---------->HVH21                     --------->GLK1(2)  <-----------RAV1(2)                        < ----->ARR14(2)                      <---------GLK1(2)   ===================RAV                   <-- ------ARR14(2)              <------ZmHOX2a(1)      --------->ANAC58    --------->ANAC58 <----------DOF2   atatgacagtgaagggagaagagcgaagacaggaacatagattccgacaactacaagaaccaggagcaacatggaagccaattgatgtcttctttgtctt  27465800                                                                           --------------->AGL15                                                                          <---------LBD16                                                                        <-----------GT1           <---------ZAT2                                          <---------DAG2           --------->ZAT2                      --------->ANAC58    <----------DOF2           <---------At4g35610                 --------->ANAC58--------->ZAT18 <---------MYB52(1)                           <---------ZAT18  <---------ZAT18 -------GAMYB  <-----------HVH21   --------->At4g35610        <---------ANAC58 ---------------AGL1   --------->DEAR3(1)     --------->ZAT18 <---------ANAC58                    ---   cccgttgatggccagcttgtcatcgccatcgtccctcttctgcaatagtacgcttggccaaattgcgcactttttagccggttttagcaaaattcaactc  27465900                                 <---------ANAC58                       --------->ZAT14                       <---------ZAT18                                       <---------ALFIN1                       <---------ZAT14                                    --------->YAB1                <---------ARR14(2)--------->LBD16                        --------->MYB46(3)              <---------MYB46(3) <---------ANAC58                  --------->ARR14(2)              <---------DEAR3(2)<---------LBD16               --------->MYB52(1)    --------->LBD16 --------->LBD16                          ----------->HVH21   <---------LBD16 <---------ANAC46 --------->ARR14(2)     ----------->RAV1(2) --------->bZIP60(2)  <---------LBD16 <---------LBD16<---------ANAC46  --------->YAB1  <---------ARR14(2)           ----- --->ZmHOX2a(1) --------->ARR14(2)------>NtERF2   <---------YAB1<---------ANAC46<-----------HVH21   ctaaaccgggagacatcggttccggtgaactaatgccgggtttgcatactgtatcatagaaacctgacggatacaatcaccacatcagagacagactgca  27466000                                                          --------->ARR14(2)                                                          <---------GLK1(2)                                                          <---------ARR14(2)                                                   --------->ANAC58                                                   --------->ANAC58     --------->ANAC58                               ------>ZmHOX2a(1)  *TSS  ----------->ARR10   -------->P                              <---------MYB59------>ZmHOX2a(1)          --------->ANAC46                      <---------ATHB12      <---------ANAC55(2)         --------->ANAC58                     ------>MYB46(1)        --------->ANAC55(2)     <------ZmHOX2a(1)                     ------>MYB83           --------->TOE2(3)      <----------ID1          <--------- ------>RAV1(1)     --------->WOX13(1)      --------->TOE1(3)   ---------->DOF2         --------->YAB1   acaagaagaagttgaagtataccaatcaatttcctaacttgatgttccttaacaagcccagatttgaaaaggacaagctaccaaaaactatcaaattggt  27466100                                                                                                    -                                                                                                    -                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                             <------NtERF2                                     ------                     --------->ANAC46       --------->LBD16                                    <-----                     --------->LBD16       --------->RAP2.6(2)                                -------                    --------->ATERF1(2)   <---------ANAC46                                    <------                    <---------ATERF1(2)   ----------------->AGL1                              -------                   --------->RAP2.6(3)    <---------LBD16                                     <------                   --------->DEAR3(2)<---------ALFIN1                                         <------                  --------->MYB52(1)<------NtERF2      --------->ANAC46                       =======                  --------->SPL7  --------->RAP2.3(3)--------->MYB52(1)                       <------                <---------SPL7 --------->ANAC58      <---------DOF5.7(2) ----------->RAV1(1)  =======               <---------ANAC58--------->ANAC58 --------->DAG2    ----------->HVH21           <------               --------->YAB1---------->DOF2<------NtERF2      --------->ARR14(2)            -------- ---CBF        <---------ANAC58--------->ANAC46---------->DOF2 <---------ARR14(2)       <---------MYB52(1)   ttaagaagctatcgctatcgtaccggcaaattcaagcccccatggccggaaaagtaaacggctcggatttgacgacaacatcactacttcgttatcacgt  27466200      <-------MYC2      ------->MYC3      ------->MYC2      <-------MYC3     <---------TGA1a     <---------ANAC58     =================================bZIP_DOF     --------->TGA1a     <---------ANAC46     <---------ANAC58     <---------ANAC55(1)     <---------O2     --------->ANAC55(2)     <---------ANAC55(2)     --------->O2 <-----------HVH21 -------->bZIP60(2) -------->ANAC46 ------ZAT18 ----TEIL ----->ZAT18 --MYC2 ->PIF4 ->MYC4 --PIF4 --PIF5 --MYC4 ->PIF5 ->MYC2 ->MYC3 --MYC3--------->ALFIN1 -->ANAC55(2)                                           <---------ANAC58 ---TGA1a                                               <---------ANAC46 -->TGA1a                                               <---------ANAC58 ---ANAC46 --------->ATHB12                      --------->ANAC55(2) ---ANAC58--------->ICU4                 <---------AHL20(1) =====================================bZIP_DOF <-----------GT1 ---ANAC55(2)                            --------->AHL20(1)<---------ZAT14                          < ==============bZIP_bZIP                 --------->AHL20(2)--------->ZAT14                          - ---ANAC58<---------YAB1                 <---------AHL20(2)--------->REM1(2)                 -------- ---->OsbHLH66             ---------->DOF2<---------AHL20(2) <---------ANAC46         ---------->DOF2   gcacatcacgtgttgattagagtatggactaaagtcaacaaaataaaatttacatattgtgtgtagtgtattggacatgggctcaactcaaagttacact  27466300                           --------->ANAC58                           --------->ANAC55(2)                           --------->ANAC58             --------->ANAC46   --------->ATHB12        --------->ANAC55(1)          --------->ANAC58                            - ---------ICU4             --------->ANAC46             --------->ANAC58                            - -------->YAB1  <----------DOF2             --------->MYB46(3)       --------->YAB1          <------- ->ZAT6      <-----------GT1              --------->ANAC46---------->DOF2                    --------   aatcttgatttgttttttctttgtaatacacgcaacttgcatacaaaccaatgcccatacgaaagtctaaatcagaaacaactcttcttccaccatatac  27466400                      XXXXXXXXXXXXXXXXXXXX>MIR838                --------->ARR11(3)                <---------ARR11(3)              --------->WRKY12            <-------GAMYB           <---------ANAC58           <---------ANAC46                         <-----------GT1 -------->TOE1(3)  <----------DOF2                --------->AHL20(2) -------->TOE2(3) ------>ZmHOX2a(2)     --------->YAB1                                     <---------ANAC46 --ARR14(2)<---------ANAC58 --------->ANAC46  <---------AHL20(2)                           <---------ANAC58 ->ARR14(2)<---------DEAR3(1)        <---------CCA1(2)                                     <---------ANAC58   acccttaataggggcgttgatctttcttctacgtcttgcatatcatattcaatttaacaaatttagtttagattccattttgatgcttcattttcgtatt  27466500                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    <---------ARR14(2)                            --------->At4g35610                          <---------ANAC58                         <---------bZIP60(1)            ---                          <---------ANAC58<---------ATHB12         --------->bZIP60(1)            <--                         <---------At4g35610                  --------->CCA1(2)          ------------                         --------->HSFC1(2)            <---------ICU4                   --------->ANAC58                ==========================HOX2a_HOX2a  --------->YAB1                   --------->ANAC58                ------>ZmHOX2a(2)   --------->ARR14(2)<---------ATHB51               --------->ZAT14        --------->DAG2   <---------HSFC1(2)           --------->ICU4<-----------HVH21<---------ZAT18       ---------->DOF2 <--------P  <------ZmHOX2a(1)  <---------ATHB12     <-------TEIL --------->ANAC46   gtttatccaaaaagttgatctataggtagcttctgaaggatccaatgagtcatacaataatgagatttgatgtcacgttcacacttgtacacccaatttt  27466600  Previous    Next  AGI:  At1g72990.1    Description:  BGAL17 (BETA-GALACTOSIDASE 17); beta-galactosidase. Identical to Beta-galactosidase 17 precursor (BGAL17) [Arabidopsis Thaliana] (GB:Q93Z24;GB:Q2V4C9;GB:Q9SSM8); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.2); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45709.1); similar to putative beta-galactosidase [Oryza sativa (japonica cultivar-group)] (GB:AAV59405.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ73218.1); contains InterPro domain Galact Range:  from: 27460927    to: 27466050    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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