Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ZAT2                              --------->ZAT2                              --------->At4g35610                              <---------At4g35610                             <-----------RAV1(1)                           <---------ZAT2                          <-----------RAV1(1)                         <---------RAP2.6(2)                    <---------ARR11(3)                     <-------GAMYB                          <---------At4g35610                    <-----------RAV1(1)             <---------ANAC58                 --------->GLK1(2)                  <---------ANAC58                --------->ANAC55(2)                --------->ARR14(2)  <---------CCA1(2)      <---------YAB1          <---------TOE1(3)                <---------GLK1(2)  ------->TEIL     <---------ANAC46      ------>MYB83                <---------ARR14(2)--------->REM1(1) <---------AtLEC2      ------>MYB46(1)         <--            <---------LBD16<---------At4g35610 <---------MYB46(3)      --------->MYB46(3)   <--------          ----------->HVH21--------->At4g35610 <-----------RAV1(1)------>ZmHOX2a(2)<---------TOE2(3)      <---------TOE1(2) <---------At4g35610    <---------REM1(1)--------->ARR11(3)<---------DOF5.7(2)   acatatcgtagtttgacggattctgttgctgctgctgcatctcttgttgttgttgcatgttctgatgatctaaaccatccacattaacgtattcatctcc  27460100                                                          ===================RAV                                                          <-----------RAV1(1)                                                      <---------ANAC58                                                  <----------DOF2                                          <---------ARR14(2)       --------->LBD16                                          <---------ARR11(3)       ------>ZmHOX2a(1)             ----                                          <---------GLK1(2)<---------At4g35610                   ----      <---------YAB1                      --------->ARR11(3)     ----------->RAV1(2)           ------   ---------->ID1                         <---------ARR14(3)     ===========================RAV<----- -------MYB52(1)                  --------->CCA1(2)   <---------ANAC58          ----------->RAV1(1) -At4g35610         <---------TOE1(2)     --------->ARR14(3)  <---------At4g35610 <---------ALFIN1   gtcttgttgtaatagactttcgaaggaattgcagcgatatggaagattttgcctttgcctatgctgctcctgagctagagagcgacacatatcgatttgc  27460200                                                                                           <-------MYC2                                                                                           ------->MYC3                                                                                           ------->MYC2                                                                                           <-------MYC3                                                                                           <-------PIF5                                                                                       <---------ZAT18                                                                                       --------->ZAT18                                                                                     --------->ANAC46                                                                                  ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)               <---------ARR14(2)                                                =================================HOX2a_HOX2a                                                ====================HOX2a_HOX2a --------->ARR14(2)                                               --------->ARR11(3)               <---------AGP1             --------->At4g35610               <---------ARR11(3)         ------>ZmHOX2a(1)------->PIF5 ------->HVH21                     =================================HOX2a_HOX2a --------->ARR11(3) ------->TGA1<---------At4g35610   ------>ZmHOX2a(2)         ============================HOX2a_HOX2a< --->At4g35610                   <---------ARR11(3)          ------>ZmHOX2a(1)  <---------ARR11(3)  < ----At4g35610                   --------->ARR11(3)   <---------GLK1(2)   ===============HOX2a_HOX2a<   tgacgagttaagttaagctcagtctgaacaaactcgatcttgcacttaagatcacagattgtcctgtaaacccctcctactggatctagggcacgagcat  27460300              --------->GLK1(2)             --------->ARR14(2)             <---------ARR14(2)             <---------GLK1(2)             --------->ARR11(3)                                           <---------ANAC58           ----------->ARR10                                              <---------ANAC46     <--------P                                                           <---------ANAC58   ----------->GT1                             <---------GLK1(2)     <-----------RAV1(1)  --------->ALFIN1                      --------->GLK1(2)            <---------bZIP60(2) ---------ANAC58                       <---------GLK1(2)             <---------REM1(1) ---------ANAC58                     ----------->ARR10     --------->ARR11(3) ---------ANAC46                <---------ANAC46           --------->GLK1(2)                <--------   tagcgtggtagataagattctccatagcgatgtctcgttgagattcttcgattctcttgagcatcttggtgatgttgcttactccaaacagtttatgagc  27460400                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                           --------->ZAT2                                                                                           <---------At4g35610                                                                                           <---------ZAT2                                                                                           --------->At4g35610                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                     --------->At4g35610                                                                                     <---------At4g35610                                                                                     <------NtERF2                                                                                  --------->ATERF1(1)                                                                    <----------DOF2 <---------ATERF1(1)                                --------->MYB52(1)           <---------DAG2      --------->ANAC46                        <---------ANAC46   <---------ARR14(2)<----------DOF2    <---------ATERF1(2) -YAB1     --------------->AtSPL8  --------->TOE1(2)    <-----------GT1   <---------MYB46(3)   ------   gtttagaaacttatttgtgccatcttgtgggaaataacgagcgagaatacagtttttcttacacttttttctttggtgtttgcaggcagcgcaagctgtg  27460500        --------->LBD16      <---------LBD16     --------->MYB52(1)    --------->AtMYB61    <---------ALFIN1   --------->MYB46(3)   <---------MYB55(2)   <---------ABI4(2) <---------ARR14(2)                                                            <---------ANAC58 --------->ARR14(2)            <------MYB83                     --------->ARR14(2)          ========= -----MYB46(3)          <------ZmHOX2a(1)                      <------ZmHOX2a(1)            ------>ZmHOX2a(1) -----ANAC46       <----------DOF2                           <---------TOE2(3) <---------ANAC58     - ----AtMYB61 --------->DAG2    <------MYB46(1)  <---------ARR14(2)      <------NtERF2       ========= --->ALFIN1 ---------->DOF2   --------->MYB59  --------->CCA1(2)<---------ARR14(2)    <-----------GT1   gtggaaccaccggagaaagtgcttaaggacattaggtttatgttttgggatatatggaagttttaggatttggcagagtttccttgtttttctccttaag  27460600                         --------->ARR11(3)             <------ZmHOX2a(2)            --------->ARR11(3)            <---------ARR14(3)            --------->ARR14(3)            <---------ARR11(3)                                                                 ------            <---------ARR14(2)                                                                 <-----            --------->ARR14(2)                                                         --------->AHL20(2)    <-------TEIL         <---------ARR11(3)----------->GT1                             <---------AHL20(2) ===================HOX2a_HOX2a        <---------MYB46(3)                           <---------MYB46(3) -------->DAG2------>ZmHOX2a(2)       <---------ANAC46       --------->YAB1         ----------->GT1 ====================HOX2a_HOX2a    --------->ALFIN1    ------------>CBF           <--------P<-------   agaaggtgcaagaagatcgtggagagagttcttccgagttgtgggtagagaaattttcagcaatggtatcttaagagaaattttggtagttaaatagagt  27460700                                                --------->AHL20(1)                                               --------->YAB1<---------GLK1(2)                                          ------------>CBF--------->YAB1                                  --------->ARR11(3)   <-----------GT1  --------->ZAT6                  <---------ARR11(3) <---------AHL20(2) ------------>CBF                <---------CCA1(2) <---------AHL20(2) --->ZAT18 <----------DOF2    <---------AHL20(1)<---------AHL20(1)                           ------->TEIL ----ZAT18 <---------DAG2    --------->AHL20(2)--------->AHL20(2)                 --------->ICU4 --------AtSPL8 <---------YAB1--------->AHL20(1)<---------AHL20(2)          <-----------GT1 <--------   actaacaatagcccttttctgattttcacaaatatatatctgtttgcaattatatttttatcagattttagttgattttttctaatttttagatgtatct  27460800                                                                                       ----------->GT1                                                                                      <---------TOE1(3)                                                                                      <---------TOE2(3)                                                                                 --------->REM1(2)                                                                              <---------ANAC58                                                                              <---------ANAC55(1)       <---------AHL20(2)                                 <---------TOE2(3)   <---------ANAC58  <----       --------->AHL20(2)                           <---------AHL20(2)        <---------ANAC46  <----       <---------AHL20(1)                       <---------YAB1                <---------bZIP60(2)   <---------AHL20(2)                 <------ZmHOX2a(1)<---------YAB1        <-----------------------TaNAC69(2) -CCA1(2) <-----------TBP           <---------TOE1(2) --------->TOE2(3)<---------AHL20(2)       <----   agtttttattttatttgtagataaacatctaatatttgtaggattatctgataattcattaatgtttttatattttagtggcgtgtataaggttttttgt  27460900                                              --------->ANAC55(2)                                             <---------LBD16                                             <-----------------AG                        --------->At5g28300 --------->MYB52(1)          <---------ANAC46       <---------ARR11(3)          <---------ANAC58       --------->ARR11(3)                                   <-----------GT1          <---------ANAC58       <---------GLK1(2)                             <----------DOF2 -----ANAC58           ----------->GT1      <-----------GT1                 --------->ARR11(3)    <-- -----ANAC46        ----------->RAV1(1)   <----------DOF2                   <---------ARR11(3)    <-- -----ANAC58       --------->MYB46(3)     <---------GLK1(1)              --------->AHL20(2)   -------   gtggatagaattgcttaaacaacaacagtaaaatagatttttggatttacggacttggaaatgttttttcgaccataaaatctttttttatcgggtctga  27461000  Previous    Next  AGI:  At1g72980.1    Description:  LBD7 (LOB DOMAIN-CONTAINING PROTEIN 7). Identical to Putative LOB domain-containing protein 7 (LBD7) [Arabidopsis Thaliana] (GB:Q9SSM9); similar to LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) [Arabidopsis thaliana] (TAIR:AT3G13850.1); similar to Protein of unknown function DUF260 [Medicago truncatula] (GB:ABN08385.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 27459888    to: 27460532    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g72990.1    Description:  BGAL17 (BETA-GALACTOSIDASE 17); beta-galactosidase. Identical to Beta-galactosidase 17 precursor (BGAL17) [Arabidopsis Thaliana] (GB:Q93Z24;GB:Q2V4C9;GB:Q9SSM8); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.2); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45709.1); similar to putative beta-galactosidase [Oryza sativa (japonica cultivar-group)] (GB:AAV59405.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ73218.1); contains InterPro domain Galact Range:  from: 27460927    to: 27466050    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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