Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------TOE2(3)                                                       --------->AHL20(2)     ------>ZmHOX2a(1)                ----------->GT1                             <---------AHL20(2)     <----------DOF2                 --------->ARR11(3)                         --------->TOE2(3) <---------ARR14(2)                  <---------ARR11(3)     <----------DOF2    <--------HAHB4      -- ---------GLK1(1)         <---------AHL20(2)          <---------WOX13(1)       --------->YAB1     <-- -------->GLK1(1)         --------->AHL20(2)        --------->ATHB12          <---------YAB1      --- --->DOF2 <---------TOE1(3)      ---------->DOF2   <---------YAB1          --------->ICU4       -----   ggaaatccttttaaggcttagtttcaatataaatacaaagatgttatttgatagtgattgttctttgtaacgaagtacttatcattaatttcaatttgca  27456000                                                              <---------ANAC55(2)                                                     --------->AHL20(2)                                                     <---------AHL20(1)                                             ----------->GT1  <------MYB46(1)                                          --------->ZAT2      <------MYB83                                          <---------ZAT2      ----------->GT1        ----------->GT1                   <---------STY1(2)  --------->MYB59     --------->GLK1(2)                    --------->STY1(2)  --------->MYB111(1)                  --- ----->GAMYB  --------->YAB1         <-----------GT1 <---------AHL20(2)                           <-- -------MYB52(2)                  ----------->GT1    --------->AHL20(1)                          <--- ------>MYB46(3)                ---------->DOF2     --------->AHL20(2)                    --------->ZAT18 ------>RAV1(1)                <------ZmHOX2a(1)    <---------AHL20(2)       <---------YAB1      ----   acaaacaattctgtaacaataagtctaatgtgaggaaagttactagctggtaaaataaattagtaggtaactattttttatgagtaaatgagggaactat  27456100                                                                                               <-----                                                                                           --------->ANAC46                                                                                           ------>MYB83                                                                                           ------>MYB46(1)                                                                                           --------->ANAC58                                                                                         <---------ALFIN1          <---------YAB1                                                           --------->ZAT14        <---------At4g35610                                                        <---------ZAT14 ------>ATHB12<-------TEIL                                                        <---------ZAT6  <-- -------AHL20(2)        <----------DOF2                 <---------ALFIN1  --------->ANAC55(2)  ------ ------AHL20(2)         ------>ZmHOX2a(1)             <---------ALFIN1   <---------TOE2(3) --------->ANAC58 ----->AHL20(2)      ---------->ID1                <----------ID1       <-----------GT1  --------->AtMYB61   taattgagtaagatgattcatatgtccttttcatttgctatattcgacagaatgggacacacctaaaatcaaatttacgttttagtgtagaccaccccaa  27456200          --------->ANAC46                                                       <---------ANAC46        <-----------GT1                                                        <---------At5g28300     <---------ICU4                                                            ------->TEIL   <----------DOF2                            <---------At5g28300             <-----------GT1 ----ALFIN1                              <---------AHL20(2)       --------->TOE2(3) -------ARR11(3)                    <---------YAB1  <-----------RAV1(1)    --------------->AtSPL8   < ----->RAV1(1)               <-----------GT1 <-----------GT1     --------->MYB46(3)     --------->ZAT6   catctctttattacacaacttgtgtttttttttactatatgatttttttaccgaatgttgttgtctaaccaaaattcaatgtaccgtataagactataag  27456300                                                   --------->ALFIN1                                                  ------->MYC3                                                 ===================================MYC_MYB                                                 --------->O2                                                 <-----------RAV1(1)                                                 <---------O2                                                 --------->TGA1a                                    <---------AHL20(1)                                 --------->MYB52(2)                                    --------->AHL20(1)                               <---------MYB52(1)                                    --------->ARR11(3)                              <-------GAMYB                                    <---------ARR11(3)                              --------->TOE2(3)                                   ----------->TBP<-------MYC3 <---------YAB1<---------MYB52(1)                                 <---------------AGL15        --------->AHL20(2)   <---------MYB46(3)                                <-----------------AGL3       --------->AHL20(2)    ==================                              <-----------GT1    ===================================MYC_MYB     <----                           --------->ANAC55(2)   <---------TGA1a            <-------GAMYB<---------ZAT6                     <---------ANAC55(2)        <-------MYC3 <---------AHL20(2)    ------>ZmHOX2a(2) -----------GT1 ----------->GT1------------>CBF ------->MYC3--------->ICU4 <-----------RAV1(1)<------   ttatacaactcgtagaaatggttacatatatgtaacaatatatagagacacatgtgggtgtaattaatatagttgctctgttggatcgttagtgttattt  27456400                                                                      <-----------GT1                                                                   --------->YAB1                                                                   <---------ICU4                                           <xxxxxxxxxxxxxxxxsmallRNA(s)                                        ----------->RAV1(1)       --------->ICU4                    -             --------->ANAC58        --------->ANAC58             <---------ATHB51                  <             --------->ANAC46        --------->ANAC58             <---------ATHB12               ---- <------ZmHOX2a(1)         *TSS      --------->ANAC46        --------->ANAC58                   ----- =======HOX2a_HOX2a     <---------ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(s)--------->YAB1     --------->AHL20(2) -----AHL20(2) --------->ANAC46    ---------->DOF2           --------->ANAC58           --------->AHL20(2) -----TBP    --------->ANAC58 --------->YAB1<xxxxxxxxxxxxxxxxsmallRNA(s)              --------->TOE2(3)   ataggagaagaaaacacacaaaacaagaccattcatcaaaagccacataagaagttgatgcagaagcaataataacaaaacaaaaaaacattaaaaaaaa  27456500                                                                                                  ---                                                                                              <------                                                                                              -------                                            <----------DOF2                                  <-------                   <---------ZAT14       <---------ARR11(3)                                  -------- -------->ARR11(3) <---------At4g35610   --------->ARR11(3)                xxxxxxxxxxxxxxxxx>smallRNA(fl3) ---------ARR11(3) --------->At4g35610 --------->ANAC58                  ------>NtERF2------>ZmHOX2a(1) ----->DAG2        --------->ZAT14     --------->ANAC58                 --------->LBD16 <---------ALFIN1 ----->DOF2<---------AtMYB61  <---------ATHB12    <----------DOF2 <-----------HVH21  --------->ANAC46   aagctcttcagttttggtttctgcagtctccaatggctctcaagctctttctctttgctcttcttctctgtctcccgacttctctctcctccactgcctc  27456600            <----------DOF2  <-----------HVH21                                             <----------DOF2 ------->DOF2                                  <---------ARR11(3)                         <---------ANAC58 ---------AGL15                   ------>ZmHOX2a(1)          <-----------GT1     <---------YAB1 -------->AGL15               --------->ARR14(2)       <------------------------ANAC81    <---------ANAC46 ----------AGL1           --------->ANAC46     --------->ARR11(3)           <-------GAMYB <---------ANAC58 --------->AGL1     <----------DOF2        ---------->DOF2  <-----------GT1<---------MYB46(3)   taaaggtcacttctctttctctctttaaacacaatcctcccattacaaagttctctctgtttttatctttctcttggtcgttgatgattctgtcttgttt  27456700                                                                                                    <                                                                                                    -                                                                                                 ----                                   --------->YAB1     --------->YAB1         ---------->DOF2    -----                             --------->ANAC55(2)     <-------TEIL       <---------AHL20(1)      =====                             <---------ANAC55(2) <-------TEIL           --------->AHL20(1)<---------ANAC58                           <-----------GT1    --------->CCA1(2)      --------->AHL20(2)   <---------ANAC58                        ----------->GT1      <---------ARR11(3) <----------DOF2   --------->GLK1(2)<-   ttagctatagctctgtttttcgaaactagttacttattcatagacatgatatacattcataagcttcttttttatatattaaagactctgtttcttgatc  27456800         <---------ARR11(1)         --------->GLK1(2)         ------->TEIL         <---------ARR14(2)         --------->ARR14(2)        <---------CCA1(2)        <---------GLK1(2)                                                 <----------DOF2        <---------ARR14(1)              --------->ZAT14              <---------ANAC58      <---------MYB59            <---------ZAT14                     <---------ANAC46   <---------WRKY18(1)           --------->ZAT14                   <---------ANAC46 ---------ICU4                   <---------ZAT18                  <---------MYB52(1) -------->YAB1                   --------->ZAT18            <---------ARR14(2) ----->WOX13(1)          <---------ZAT18<---------ZAT18     <---------ZAT14 ->ZmHOX2a(2)           <------ZmHOX2a(1)            <-----------GT1 <---------ANAC58 ==============================HOX2a_HOX2a    <----------DOF2   <-----------RAV1(1) --------ATHB12        --------->ANAC46 <---------ZAT14  <---------ANAC55(2)   catcatgaccgaatcttgagtaaccaggacactagtgcacagtccagtctttttttaacgcgtaaactgttgtgtgttttttgggttatgttctgctata  27456900  Previous    Next  AGI:  At1g72970.1    Description:  HTH (HOTHEAD); aldehyde-lyase. Identical to Protein HOTHEAD precursor (HTH) [Arabidopsis Thaliana] (GB:Q9S746;GB:Q9SXZ3); similar to glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G12570.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78644.1); similar to hypothetical protein OsI_030036 [Oryza sativa (indica cultivar-group)] (GB:EAZ08804.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45701.1); contains InterPro domain Glucose-methanol-choline oxidoreductase, C-terminal; (InterPro:IPR007867); contains InterPro domain Glucose-methanol-choline oxidoreductase; (InterPro:IP Range:  from: 27456427    to: 27459625    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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