Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                              --------->AHL20(2)                          <---------ATHB12                --------->ANAC55(1)                --------->YAB1<---------AHL20(2)                --------->ANAC58              --------->MYB52(1)      --------->YAB1   <---------AHL20(2)                                           ---------->DOF2     <---------ATHB12 --------->AHL20(2)                                          <---------YAB1   --------->WOX13(1) <---------AHL20(2)                                        --------->CCA1(2) -------ARR11(3)----------->GT1--------->ATHB12                                --------->ARR11(1) ------>ARR11(3)--------->ANAC58                   --------->At4g35610       ----------->ARR10  <---- ------HSFB2a(1)--------->ANAC46                   <---------At4g35610  --------->ANAC58       <----- ----->HSFB2a(1)--------->ANAC55(2)            --------->WRKY18(1)      --------->ANAC58--------->ARR11(3)   gatttcaatcacagacaaacgtaattaaatcatttattggaaaatgtgagtcaagctgaataaacttgatgcacacgaatagatatgaaagaaattgggt  27445500                             <---------GLK1(2)                  <---------RAP2.6(3)                  --------->MYB52(2)                  ------>NtERF2                      <---------MYB52(1)                  ----------->RAV1(1)               <-----------HVH21                 <----------ID1                <---------ANAC58                 --------->RAP2.6(2)     <----------DOF2                 <---------ETT(1)       ------>ZmHOX2a(2)                 --------->DEAR3(1)   --------->ARR11(3)       --------->MYB46(3)          --------->ANAC58                --------->DEAR3(2)    <---------ARR11(3)     <-----------GT1               --------->ANAC58 ----P        --------->ANAC58      <---------YAB1--------->SPL7            ------>ZmHOX2a(2) --GAMYB      --------->ANAC58------->TEIL     <---------ANAC58<---------ATHB12     --------->YAB1   tgatcaacaaaaaaacaagccgacaaaaactgaatcttatgatcttttttcgtccgtcagtttcaaccattcgtttgatcggataatcaaaaccagcaaa  27445600                                                                                                  <--                                                                                           ------>NtERF2                                                                                           <------NtERF2                                                                                           --------->ATERF1(1)                                                                                          ------>NtERF2                                                                                          --------->RAP2.6(2)                 ---------->DOF2                                                          <---------RAP2.3(1)             <---------------AGL15                                                        <---------ATERF1(1)             --------------->AGL15                                                        <---------ERF1            <-----------------AGL1                                                       <---------ANAC58            ----------------->AGL3                                                       <---------RAP2.6(2)            ----------------->AGL1                        --------->YAB1                 <---------RRTF1(2)            ----------------->AGL2                        <---------ICU4                 <---------DEAR3(1)            <-----------------AG                      --------->AHL20(2)                 <---------RRTF1(3)           ----------->RAV1(1)                        <---------AHL20(1)                 <---------RAP2.3(2)          --------->ANAC58                 <---------MYB52(1)   --------->YAB1           <---------ANAC58          --------->ANAC46    <---------YAB1          <---------AHL20(2)                 --------->ATERF1(2)          --------->ANAC58  --------->YAB1<-------GAMYB  <---------YAB1  <---------ICU4  <---------ATERF1(2)    --------->YAB1         <---------YAB1<---------MYB46(3)  --------->YAB1              <---------DREB2C(2)    <--------ATHB1       <---------At4g35610 --------->MYB52(2)<---------YAB1            <---------RAP2.3(3)   <---------ATHB12 ----------->GT1      --------->MYB52(2) <---------YAB1          <----------DOF2   <---------ATHB51--------->DAG2<---------YAB1       --------->AHL20(1)<---------YAB1  --------->RAP2.6(3)   tgccaataatacacaccagaaaaggtaagatgataatttttgttcgttagtagtattttattattatcatgctcatcattttcttactttggcggcccat  27445700                                                   --------->AHL20(2)                                              ----------->GT1                                              --------->ANAC58                                              --------->ANAC58                          <---------DAG2                                         ----------->HVH21                              <----------DOF2                                       --------->ZAT2                                <---------ALFIN1                                       --------->At4g35610                --------->ANAC46      <----                                       <---------At4g35610        --------->LBD16 <-----------GT1 --------DOF2<----------DOF2          --------->GLK1(2)          <---------LBD16  --------->ANAC46   cttttctcttcccctctttctgagtagtttagcaaaacagaagctgacaagaaaaaaatagaacatgcctggaaatacacaattacaccactttagcagg  27445800                              <----------DOF2                          <-------MYC2                          ------->PIF5                          ------->MYC3                          <-------MYC3                          <-------PIF4                          ------->PIF4                          <-------PIF5                              <---------YAB1                          ------->MYC2                             --------->ARR11(3)                          <-------MYC4                             <---------ARR11(3)                        ------->TEIL                              --------->RVE1(1)                      <---------ZAT18                             --------->CCA1(1)                     --------->AtLEC2                         ----------->TBP                    ----                  <---------ICU4                        <---------ZAT18        <----------DOF2-------                 ------------>CBF                       --------->ZAT18        ------>ZmHOX2a(1)<---- --ZmHOX2a(1)    <---------ATHB12           --------->MYB46(3)--------->AHL20(2)<---------MYB52(1) *TSS   aagactatgggagtctctaatcaatgcacatgctttattcagttcaactactctctagtggtctataaatatccttgagtcctttatttctattactcat  27445900                                                                                                  ---                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ======                                                                                               <-----                                                                                               ------                                                                                           <---------ALFIN1                                                                                        <---------ETT(2)                                  <---------ICU4                                        --------->ETT(2) ----->YAB1             --------->YAB1                                           <---------At4g35610 -->YAB1              --------->GLK1(2)                             ================================= -----YAB1<---------------AGL15--------->YAB1 ------>ZmHOX2a(1)     <----------DOF2 <------ZmHOX2a(1)   catacttaagttctcaatagagagaatcaaaaatcaaaatgacttctcctactgcgactaagtatgatgtctttctgagtttcagaggagtcgacactcg  27446000                                                                                                   <-                                                                                                   --                                                                                               ------                                                                                              <------ ------>ANAC46                                                                           <---------GLK1(1) -------HVH21                                                                            --------->GLK1(1) ----TGA1a                                         <----------DOF2                  <------NtERF2  <- --->TGA1a                                --------->HSFB2a(1)                      <------NtERF2   -- ================================bZIP_DOF <---------HSFB2a(1)                      --------->LBD16 -- ----O2               ---------->DOF2     --------->HSFC1(2)          <---------ANAC58  <---------ARR14(2) --->O2             <---------REM1(2)     <---------HSFC1(2)<----------ID1       <---------LBD16----- ====bZIP_DOF    <---------------AGL15----------->GT1  ---------->DOF2<---------ANAC58 <------ZmHOX2a(1)   tcgcaacttcatcagttttctctacaaagaattcgttcgaaggaaaattcgaactttcaaagacgacaaggagcttgagaatggccggaggatttctccg  27446100          <------NtERF2        --------->ANAC58        --------->ANAC58        --------->ANAC46    ---------->DOF2                                          <---------ANAC58 --------ZAT2                                                <---------ANAC46 ------->At4g35610                                           <---------ANAC58 --->ANAC46    --------->HSFB2a(2)  <-------GAMYB           ------>NtERF2                        <--- ---LBD16------>NtERF2           ------>NtERF2           <---------At4g35610                 -------- --------At4g35610        --------->ARR14(2)             --------->At4g35610               <---------YAB1 ------->ZAT2  <---------HSFB2a(2)<------NtERF2         --------->ANAC46                   --------->ICU4 ------->GLK1(1)  <------ZmHOX2a(1)<---------MYB46(3)  <---------ZAT14              <---------ANAC58 ---->LBD16--------->DEAR3(1)   --------->DEAR3(1)--------->ZAT14                   <---------ANAC58   gagctcaaacgcgccatcgaggagtcgaaattcgccgtcgttgttgtctctgtaaactacgctgcgtctccttggtgtctcgatgagcttgtgaagatta  27446200                                                       --------->LBD16                                                      <---------ANAC55(1)         <---------REM1(1)                                                      <---------ANAC58            <-----------RAV1(1)                                                      --------->ANAC55(2)     <xxxxxxxxxxxxxxxxsmallRNA(s)                                                      <---------ANAC55(2)     <xxxxxxxxxxxxxxxxsmallRNA(i)                                                      <---------ANAC58       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                      <---------ANAC46       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                    <------ZmHOX2a(2)       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                    ======================HOX2a_HOX2a                                                   --------->ARR14(2)       ------>ZmHOX2a(2)                                                   --------->TCP20         <------ZmHOX2a(2)                                   --------->ARR14(2)=====================HOX2a_HOX2a <---------At4g35610                                   <---------ARR14(2)------>ZmHOX2a(2)    <---------ARR14(2)                                  <---------CCA1(2)<---------ARR14(2) <------NtERF2<-----------HVH21 <---------GLK1(1)         <---------MYB52(1)   --------->ALFIN1   <------ZmHOX2a(1)  --------->At4g35610 --------->GLK1(1)        <-----------HVH21   <---------ANAC46     ===============HOX2a_HOX2a ------TOE2(3)         <---------At5g28300    --------->ALFIN1     ================HOX2a_HOX2a ->ARR11(3)           <---------ALFIN1    <---------LBD16<-----------HVH21--------->ARR14(2)   tggatttcgaaaacaagggttccatcaccgtgatgcctatcttctacggtgtggatccgtgtcatttgaggaggcagatcggagatgtcgctgaacagtt  27446300                                                                          <---------GLK1(1)                                                                         <---------ARR14(2)                                      <---------ANAC58                   --------->ARR11(3)                                      <---------ANAC58                   --------->ARR14(2)                               ---------->DOF2          ----------->HVH21<-----------ARR10                           <---------YAB1               --------->WRKY38(1)    --------->LBD16                        <------ZmHOX2a(2)               --------->WRKY45 <---------ARR11(3)       <-------PIF5    --------->ARR11(3)               --------->WRKY12<---------CCA1(2)  --------->AtLEC2       ------->PIF5    <---------ARR11(3)<---------ANAC46<---------WRKY18(1) <---------LBD16      ---   taagaagcacgaggctagagaagaagatcatgagaaagttgcttcgtggagacgagcattgaccagtttggctagtatctccggagattgttcatccaaa  27446400  Previous    Next  AGI:  At1g72940.1    Description:  disease resistance protein (TIR-NBS class), putative. similar to disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] (TAIR:AT1G72950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 27445899    to: 27447517    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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