Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ATHB12                --------->AHL20(2)             <-----------------AGL3            <---------ATHB12         <---------AHL20(2)        --------->AHL20(2)  ----------->GT1<---------AHL20(2)  --------->ANAC55(2)  --------->YAB1<---------AHL20(2)  --------->ANAC58                                                        --------->ARR11(3)  --------->ANAC58                                                    ---------->DOF2  <---------ANAC55(2)                                             --------->CCA1(2) <---------TOE2(3)                   --------->At4g35610         --------->ARR11(1) -------->MYB52(1)                   <---------At4g35610       ----------->ARR10 <-------GAMYB      - >YAB1  <---------AHL20(2)       --------->WRKY18(1)--------->AtLEC2<---------YAB1<--------P        -   actaacgtaattaaatcatttattggaaactgtgagtcaagctgaataaacttgatgcaaacgaatagatatgaaagaaattgggttgatcaacaaaaaa  27441200               <---------GLK1(2)    ------>NtERF2    ----------->RAV1(1)    <---------RAP2.6(3)                                                                          ----   --------->DEAR3(1)                           <---------At5g28300                             -----   <----------ID1                              <-----------GT1                                  -----   <---------ETT(1)                    <---------MYB52(1)                                       -----   --------->RAP2.6(2)                <-----------HVH21       ------>ZmHOX2a(2)           --------->YAB1  --------->DEAR3(2)             <---------ANAC58     --------->MYB52(2)                  <--------ATHB1 -------->ANAC58      <---------YAB1--------->SPL7    <---------MYB46(3)                 <---------ATHB12 -------->ANAC58------->TEIL     <---------ANAC58   <---------MYB52(1)--------->YAB1     <---------ATHB51   acaagccgacaaaaactgaatctcatgatatgttttcgtccgtcagttttaaccgttcgtttgatcggataatcaaaaccagtaaatgccaataatacac  27441300                                                                                   <----------DOF2                                                                            ------>NtERF2                                                                            <------NtERF2                                                                            --------->ATERF1(1)                                                                           ------>NtERF2                                                                           <---------ERF1                                                                           <---------ATERF1(1)                                                                           --------->RAP2.6(2)                                                                           <---------RAP2.3(1)                                                                          <---------DEAR3(1)                                                                          <---------ANAC58                                           <---------ICU4                 <---------RAP2.3(3)                                           --------->YAB1                 <---------DREB2C(2)                                       <---------AHL20(2)                 <---------ANAC58          <---------At4g35610          --------->AHL20(2)                 <---------RRTF1(3)     ----------->GT1                   <---------AHL20(1)                 <---------RRTF1(2)    --------->DAG2          <---------MYB52(1)   --------->YAB1           <---------RAP2.3(2)   ---------->DOF2        <---------MYB46(3)  --------->YAB1              <---------RAP2.6(2) ------->RAV1(1)  <---------YAB1       --------->AHL20(1) <---------ICU4  <---------ATERF1(2) ---->ANAC46   <---------YAB1 --------->MYB52(2)<---------YAB1            --------->ATERF1(2) ---->ANAC58 --------->YAB1<-------GAMYB  <---------YAB1 <---------YAB1  --------->RAP2.6(3) ---->ANAC58<---------YAB1--------->MYB52(2) <---------YAB1          <----------DOF2              <--   accagaaaagtaagatgataatttttgttcgttagtagtattttattattatcatgctcatcattttcttactttggcggcccatcttttctcttcccct  27441400                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                   --------->AHL20(2)                                               <                            <<<<<<<GRF7                                                             <                          ----------->HVH21                                                         -                        ----------->RAV1(2)         <------ZmHOX2a(1)                               <                       --------->GLK1(2)           --------->ANAC58                               ---                      <---------ARR14(2)           --------->ANAC58                             <----                      <---------GLK1(2)           --------->LBD16                          --------->MYB46(3)            ----------->GT1--------->MYB52(1)    <-----------RAV1(2)                 <-----------ARR10 --------DOF2         --------->ARR14(2)         <---------LBD16      <------ZmHOX2a(1)    ----------   ctttctgagtagtttagtaaaacagaacctgacagaaaaaaatagaaaatgccaggaaacacacacttagcaggaagactatgggagtctctaaccaatg  27441500    ===========================================================================================MADS_MADS    <----------DOF2    --------------->AGL15    <---------------AGL15 ------>MYC2 ------>PIF4 -------PIF4 -------MYC2 ------>MYC3                                      <---------ARR11(3) -------MYC4                             <---------ARR11(3) -------PIF5                             --------->ARR11(3) ------>PIF5                            --------->RVE1(1)                      <---------------AGL15 -------MYC3                        ----------->TBP  <----------DOF2           ------------>CBF ---->TEIL                    <---------ZAT18     --------->ARR11(3)   --------->YAB1               - -----ZAT18                   --------->ZAT18<---------MYB52(1)       <---------YAB1       --------->GLK1(2) -->CBF           --------->MYB46(3)--------->AHL20(2)              --------->YAB1       *TSS--------   cacatgctttatttagttcaactactctctagtggtctataaatatcgttgagttctttatttctattactcatcatagttctcaatagagagaatcaaa  27441600                                                                 <-----------HVH21                                                                =====================================                                                                <---------O2                                                                --------->O2                                                                --------->TGA1a                                                                <---------TGA1a                                                            <---------ALFIN1                                                         --------->ANAC58                                     =====================================bZIP_DOF                                     <----------DOF2     --------->ANAC58                                 --------->O2        <------ZmHOX2a(1)      <---------ARR11(3)      <---------TOE2(1)     <---------ZAT18                            ------      --------->ARR11(3)      <---------TOE1(1)     --------->ZAT14--------->ANAC46        ---------- -------->YAB1               --------->SPL7       --------->At4g35610                    <---------REM1(2) ->YAB1        ------>ZmHOX2a(1) <---------O2     <---------At4g35610                 <--------------   aatcaaaatgtcttctcctactgcgactaagtacgacgtctttctgagtttcagaggactcgacactcgtcgcaacttcatcagttttctctacaaagaa  27441700                                                                               <------NtERF2                                                                    <---------At4g35610                                                                    --------->GLK1(1)                                                          <---------GLK1(1)  --------->ANAC58                                                          --------->GLK1(1)  --------->ANAC46                                                        <------ZmHOX2a(1)---------->DOF2                                                     <------NtERF2  --------->At4g35610                                                    --------->LBD16 <---------ZAT2     <------ZmHOX2a(1)                                          --------->HSFB2a(2)   --------->ANAC46    --------->HSFB2a(2) =bZIP_DOF                            --------->ZAT2<------NtERF2   --------->ZAT2  <---------HSFB2a(2) --->ARR11(3)                <----------ID1       <---------LBD16--------->LBD16--------->DEAR3(1) >DOF2                  ---------->DOF2   <---------HSFB2a(2)  <---------LBD16------>NtERF2 -AGL15             <----------DOF2   --------->At4g35610<---------ARR14(2)  --------->ANAC58  ------   ctcgttcgaagaaaaattcgaactttcaaagacgacaaggagctcgagaatggccggaggatttctccggagctcaaacgcgccatcgaggagtcgaaat  27441800                              <---------ANAC46                              <---------ANAC58                              <---------ANAC58                             ------>NtERF2         <---------AtMYB61<---------At4g35610     <-------GAMYB        --------->At4g35610                     <---------TOE2(3)    <---------MYB46(3)   --------->ANAC46                     --------->ARR11(3)   <------NtERF2        <---------ZAT14                     <---------YAB1                      <----  ------>NtERF2    <---------ZAT14                          --------->ICU4                     <----- --------->DEAR3(1)--------->ZAT14                   <---------ANAC58 --------->GLK1(1)     <-------- --->ARR14(2)      <---------ZAT18                   <---------ANAC58 <---------GLK1(1)    <---------ALFIN1   tcgccgtcgttgtggtctctgtgaactacgctgcgtctccttggtgtctcgatgagcttgtgaagattatggatttcgaaaacaagggttccatcaccgt  27441900                       <---------ANAC58            <---------REM1(1)                       <---------ANAC58            <-----------RAV1(1)                     <------ZmHOX2a(2)         <xxxxxxxxxxxxxxxxsmallRNA(s)                     ======================HOX2a_HOX2a                    <---------ARR14(2)         <xxxxxxxxxxxxxxxxsmallRNA(i)                  ----------->ARR10           <xxxxxxxxxxxxxxxxsmallRNA(s)                 <------NtERF2                <xxxxxxxxxxxxxxxxsmallRNA(i)                 --------->ALFIN1            ------>ZmHOX2a(2)               <---------ANAC46              <xxxxxxxxxxxxxxxxsmallRNA(s)               <---------ANAC58             <------ZmHOX2a(2)            <---------DEAR3(1)      ===============HOX2a_HOX2a    --------->ARR14(2)------>ZmHOX2a(2)    --------->ARR14(2)    <---------ARR14(2)=====================HOX2a_HOX2a --------->At4g35610                          -   <---------CCA1(2)--------->ARR14(2) <------NtERF2<-----------HVH21                           <---- -----MYB52(1) <---------ANAC58     ================HOX2a_HOX2a                              <------ZmHOX2a(2) ------HVH21--------->ANAC46        <------ZmHOX2a(1)  <---------At4g35610  <-------PIF5    <-------- -At5g28300<---------LBD16<-----------HVH21<---------ARR14(2)               ------->PIF5    ---------   gatgcctatcttctacggcgtggatccttgtcatttgaggaggcagatcggagatgtcgctgaacagtttaagaagcacgaggctagagaagaagatcat  27442000                                                         <-------TEIL                                                         <---------YAB1                <-------GAMYB                                                      --------->KAN4(1)               <------MYB83                                                     <---------KAN4(2)                <------MYB46(1)                                           <---------GLK1(1)                          --------->MYB52(2)                                          <---------ARR11(3)                          --------->MYB55(2)                                          --------->ARR14(2)                          <---------MYB46(3)                                          <-----------ARR10                          <---------AtMYB61         <-------TEIL            <---------ZAT14------>NtERF2                       <---------MYB52(1)      <---------HSFC1(2)         --------->ZAT14--------->LBD16                   <---------ANAC58      --------->HSFC1(2) --------->WRKY12 <---------ARR14(2)                      <---------ANAC46 --------->DOF2          --------->WRKY38(1)   <---------DEAR3(1)            <---------ANAC58 -----YAB1               ----------->HVH21--------->ARR11(3)                 <---------ANAC58 -ARR11(3)               --------->WRKY45<---------CCA1(2)--------->ATHB12   <---------ANAC46  ------ >ARR11(3)<---------ANAC46<---------WRKY18(1) <---------LBD16      ----------->GT1<---------ANAC58   gagaaagtagcttcgtggagacgagcattgaccagtttagcgagtatctccggcgaatgttcattgaaatggtgaaatttcgtagcgttggttagaaaga  27442100  Previous    Next  AGI:  At1g72920.1    Description:  disease resistance protein (TIR-NBS class), putative. similar to disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] (TAIR:AT1G72940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16400.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 27441589    to: 27442752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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