Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->SPL7                                                    --------->SPL1(2)                                                   <---------SPL1(1)                                                   --------->SPL1(1)                                                  <---------SPL1(2)                                                  <---------SPL7                                                 <---------ANAC58                                                 <---------ANAC58                                                --------------->AtSPL3                                                <---------------AtSPL3                                                ------>ZmHOX2a(2)          <---------ANAC46                     <------------------SPL14         <---------LBD16                      --------->ARR14(2)        ------>ZmHOX2a(2)                     <---------ARR14(2)                --------->GLK1(2)   -      <---------ARR14(2)                    ----------->HVH21             ------>NtERF2             <      --------->ARR11(3)                --------->ANAC58                 --------->TGA1a     -------- -------TGA1                        <---------ALFIN1--------->RAP2.6(3)  <---------TGA1a     -------- --->TGA2(1)            <---------DAG2  --------->ANAC46                 <---------O2        <------- ----ETT(2)           ------>MYB83  --------->AtMYB61                    --------->O2        -------- --->bZIP60(1)        ------>MYB46(1)   --------->ANAC58                 =======================bZIP_DOF ----bZIP60(1)       <---------ALFIN1   --------->TGA1a               --------->DEAR3(1)  --------->ARR14(2) --->ETT(2)<---------LBD16========================bZIP_DOF           --------->DEAR3(2)   <---------ARR14(2) ----TGA2(1)        --------->MYB46(3)<---------ALFIN1              <---------At5g28300--------->DAG2 -----STF1<---------LBD16 <----------DOF2 ----------->RAV1(2)      <-----------GT1   ---------->DOF2-   tcatcgtcgatctcggggagtacccactctttcttcgaccacacgcctgatccgtacggccaatttgttttaccgacgcgagaatcgaaaaggttacgcc  27403700                          --------->RAP2.3(1)               --------->ARR14(2)                          <------NtERF2                     <---------GLK1(2)                         <---------RAP2.3(1)                <---------ARR14(2)                         <---------ATERF1(1)              --------->LBD16                         <---------DEAR4(2)             <---------LBD16        ------>ZmHOX2a(2)                         <---------ERF1              --------->ZAT18           ======================       <-----------HVH21 <---------ORA47(2)          <---------ZAT14          =======================       --------->LBD16   ------>NtERF2   --------->SPL7--------->MYB52(1)     <------ZmHOX2a(2) -------->GLK1(1)       <---------RAP2.3(3)          <---------ABI4(2)       --------->ARR14(2) ---------GLK1(1)       <---------DEAR3(1)           --------->ZAT14         <---------ARR11(3)     < ->ANAC58     <---------ANAC58     <---------YAB1<------ZmHOX2a(1)           --------->ARR11(3) ----- ->ANAC46     <---------ANAC46   --------->YAB1  =====================================HOX2a_HOX2a---- --bZIP60(1)  <---------ANAC58  <---------ATHB12 ====================================HOX2a_HOX2a<---- ->ANAC58 <---------SPL7<---------RAP2.3(2)   <---------HSFB2a(2)            <---------ARR14(2) <---- -------->ARR14(2)      <---------RAP2.6(2)   --------->HSFB2a(2)       <---------ETT(2)       <-----   agaattctccgtcgtagcgtttcaaggcggcgaaatcatgctggacgtcgaggagagcaccggattgtgaacggtagacgatctcgtcgagggagtagga  27403800                                       --------->LBD16                                    --------->ALFIN1                                  --------->TGA1a                                  <---------TGA1a                                  <---------ANAC58                          <-------TEIL                                  <---------ANAC46                       --------->ZAT2                                  <---------ANAC58                   <------NtERF2               <---                             <---------ANAC55(2)                    ------>NtERF2               <----                             --------->ANAC55(2)                   <---------DEAR3(1)      <---------YAB1           <---------------------WRI1 <---------ANAC46             --------->DEAR3(1)  --------->KAN4(2) <-------GAMYB               <---------bZIP60(1)                  --------->ATERF1(1) <---------KAN4(1) ===========================================MYC_MYB               --------->RAP2.3(1) <---------HSFC1(2) =HOX2a_HOX2a                --------->bZIP60(1)                  <------NtERF2       --------->KAN4(1) =HOX2a_HOX2a                --------->ANAC58                    <---------ATERF1(1)  --------->HSFC1(2) -----------RAV1(1)   ======================bZIP_DOF             <---------RAP2.3(1)  --------->HSFB2a(1) ---->ARR14(2)        ---------->DOF2<---------LBD16           --------->SPL7         <---------HSFB2a(1) ----->GLK1(2)    <-------GAMYB --------->MYB52(1)             <---------ORA47(1)<---------HSFB2a(2) -----ARR14(2)    ==========================MYC_MYB            --------->RAP2.6(3)   <---------KAN4(2) -----GLK1(2)  <---------ANAC46----------->HVH21              <------ZmHOX2a(1)  --------->HSFB2a(2)< -ZmHOX2a(1)--------->ALFIN1 --------->ANAC58 <---------ARR14(2)<---------DEAR3(1)   <---------TOE1(2)   ttctgttgaagaaggtggagcgttgaaagggacgtaacgtgcggagaggttttggagttgatgaggacggcgacgagcttcgtctcgaatgttctcatcg  27403900                                                 <---------DEAR3(1)                                                 <---------AtMYB61                                                 --------->ALFIN1                                              --------->ALFIN1                                              <---------DEAR3(1)            <---------ANAC46                                              <---------ANAC46 --------->At5g28300 <---------TOE2(3)                                             <---------LBD16<---------ORA47(1)   --------->ALFIN1                                       <------NtERF2        --------->SPL7<---------RAP2.3(1)                                      --------->LBD16     ----------->HVH21 <---------DEAR3(1)                                      <---------MYB46(3)  <---------SPL7 <---------RAP2.3(2)                  --------->ZAT14     ------>NtERF2       ------->GAMYB --------->ATERF1(1)           --------->GLK1(1)         <---------ANAC46    <---------MYB52(2)<------NtERF2           <---------GLK1(1)    --------->MYB52(1)       --------->MYB46(3)--------->ATERF1(1)      <---------ANAC46          --------->ARR14(2)      <---------At4g35610<---------LBD16   ----------->HVH21            <---------ARR14(2)     --------->MYB52(1)<---------DEAR3(1) <---------DOF5.7(2)      --------->ALFIN1 --------->ALFIN1--------->MYB52(1) <------NtERF2 ------ANAC46  <---------ANAC46<------ZmHOX2a(1)<------NtERF2<---------DEAR3(1)<---------ANAC46 -----MYB46(3) <-----------RAV1(1)<---------DEAR3(1) <-------TEIL       --------->At4g35610 ---------WRKY38(1) <---------ANAC46<---------LBD16 --------->ALFIN1    <---------At4g35610   <------   ggtgaacgacggggtttctgtggagtctgtggaggaacggcgggagaggcggaggtgcaacggacggtgaaggaagcggcggagtgaggtttaagtgagg  27404000                           --------->ALFIN1                           <---------ANAC46                          <------NtERF2                        <---------ANAC46                        <---------ANAC58                        <---------ANAC58                       --------->ATERF1(1)                       <------NtERF2                       <---------LBD16                                                          <----                     --------->ALFIN1                                                          <-----                   <------MYB83                                                               -------                   <------MYB46(1)                                             *TSS          <-------                  --------->MYB111(2)                 <---------YAB1    --------->DAG2     <---------                  --------->MYB111(1)               <---------ICU4     <---------ZAT14   --------->ARR11(3)                  --------->MYB46(2)               --------->ICU4      --------->ZAT14   <---------ARR11(3)     --------->ALFIN1<---------DEAR3(1)         ----------------->AGL1 ---------->DOF2  --------->YAB1 ---TOE2(3)  ---------->DOF2 --------->ALFIN1  ------>NtERF2        ----------->GT1    <---------YAB1   tttcagagtgggaaggaaagtaggtggcggagtggggaagagagaatgaggccattatgagtgagagagagagtaaagtgaagagtttgatgatattgat  27404100                                                              <---------AHL20(2)                                                              <---------ICU4                                                             <---------ATHB12                                               --------->AHL20(2)                                               <---------AHL20(2)                                              --------->AHL20(1)                                              <---------AHL20(1)             <---------MYB46(3)               <---------AHL20(2)            <---------YAB1                    --------->AHL20(2)            <---------WOX13(1)          --------->ANAC55(1)------>MYB83          --------->ATHB12              --------->ANAC46   ------>MYB46(1)         <---------YAB1                 --------->ANAC58 --------->TOE2(3) -----WOX13(1)                   --------->ANAC58     <-----------GT1    --------->ANAC58 -------CBF<------------CBF      --------->ANAC58  --------->YAB1     <----------ID1 -->ATHB12<--------ATHB1         --------->ANAC46<-----------TBP  <------------CBF    <---------AHL20(2) --YAB1  --------->ICU4 <---------MYB52(1)--------->AHL20(2) --------->AHL20(2)       --------->AHL20(2) ---CBF--------->YAB1  <----------DOF2  --------->ANAC58 <---------MYB59 --------->ANAC58   tggatagaagaatgattgttgacacctttagtcacaagtcacaagtaatttatttataacctaataaatattgggacgaaagtattcatttattgtttgt  27404200                                  --------->ARR11(3)                                  <---------ARR11(3)                                 <---------CCA1(2)                              ------->TEIL                           <---------ANAC46                           <---------YAB1                                  ----------->RAV1(1)                           <---------ANAC55(2)          --------------->AGL15                     <--                    --------------->AGL15               <----------DOF2 --------->ANAC58          <--                    <---------------AGL15               <---------------AGL15<-----------RAV1(2) <---                   ----------------->AG           ------->TEIL          --------->ANAC58       ------                   ----------------->AGL1      <---------YAB1         ---------->DOF2        <-------                   =====================================================MADS_MADS         ------->TEIL   ttttcatttgtcattccaatttccaaattatgtatatatctctctagtcatgaattttcttttgatggtagagaaagcaccagggagaaatgaatctttg  27404300                                                                             <-------TEIL                                                                          <---------ANAC46                                                                  <---------TOE2(2)       ------->TEIL                    --------->ARR14(2)         ------->TEIL                <------ <-------TEIL----------->GT1     --------->GLK1(1)             --------->ANAC58             --------- -------ANAC58                   --------->CCA1(2)             <---------ANAC55(2)      ------->MYC3 -------ANAC58                  <---------ARR11(3)             --------->ANAC55(2)      ------->MYC2 ------TOE2(3)          <---------ZAT6 <---------ARR14(2)      --------->ANAC55(1)      <-------MYC2 ----->HVH21 <---------ZAT6     --------->ARR11(3)             --------->ANAC58         <-------MYC3 ---DOF2     <---------ANAC46 <---------TOE2(3)                --------->ANAC46         ------->MYC4   acgttcatgaatctagtgtgaatttagtgtttaagatatcaaatatgcaaaaaaaaaaaaaaaacacgtatgtatggagtacatgagacatgtgccacac  27404400                            <---------------AGL15                            --------------->AGL15             --------------->AGL15                            ==================================================MADS_MADS      --------->KAN4(2)  <-----------GT1                ------->TEIL ----------->GT1      ----------->GT1<---------AtLEC2<---------YAB1         ---------->DOF2 ---ALFIN1     ----------->GT1<---------YAB1  <---------YAB1  <----------DOF2                      -- -->RAV1(1)  <---------YAB1<---------YAB1   --------->ATHB12  <---------------AGL15   <---------STY1(1)   atgaagtatattcttatgagtaaaatgttactattatttgtatggattattagtcatgaattttcttttgatggtagagaaagaagcactagggagaaat  27404500                                                          ----------->RAV1(1)                                                         --------->REM1(1)                                                       ----------->RAV1(1)                                                 --------->ARR14(2)                                           --------->CCA1(2)                                           --------->GLK1(1)                                     <---                  --------->YAB1          --------->ARR11(3)                                     ----                ------->TEIL              <---------ARR11(3)            --------->ANAC58         <---          <-------TEIL----------->GT1   <---------TOE2(3)--------->MYB46(3)------->TEIL          ---- ----->TEIL--------->YAB1         <---------ZAT6 <---------ARR14(2)     --------->ANAC58         ----   gaatctttgacattcatgaatcatgtgtaaattttagtgtttaagatatcaaatatgcaacaacaaaaaaaaacacgaatgtatggactacatgagacat  27404600  Previous    Next  AGI:  At1g72810.1    Description:  threonine synthase, putative. similar to MTO2 (METHIONINE OVER-ACCUMULATOR), threonine synthase [Arabidopsis thaliana] (TAIR:AT4G29840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44290.1); similar to Threonine synthase, chloroplast precursor (TS) (GB:Q9MT28); similar to unnamed protein product [Vitis vinifera] (GB:CAO65305.1); contains InterPro domain Threonine synthase; (InterPro:IPR004450); contains InterPro domain Pyridoxal phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926) Range:  from: 27402253    to: 27404079    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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