Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->MYB52(1)                                            <------MYB46(1)           ---------->DOF2                                            <------MYB83            --------->MYB46(3)         <-----                             --------->YAB1--------->MYB59       <------ZmHOX2a(1)             <-----                           --------->AHL20(2)                  --------->LBD16                 <----- ------>TEIL          <-------TEIL   ---------->DOF2          <---------LBD16                <------- ------ATHB12     --------->DAG2 --------->GLK1(2)           --------->TOE1(2)             <---------   tgaatatcaattccactagtaaggtgcaatttcataatctaaagtttggtttttgaaaacatacccaggaaccaaagggtacttggagtctccatgttgg  27364300                                                                         <---------ARR14(2)                                                                       ------->GAMYB                                                                      --------->MYB46(3)                                                                    <-----------GT1         <--------                                                                 <---------REM1(1)          <--------                                                               <---------At4g35610     --------->ATHB12                                         --------->ATHB12      <-------GAMYB          --------->ICU4                              --------->ZAT14                  --------->At4g35610    <---------YAB1 ----MYB46(3)               --------->ANAC58                  --------->MYB52(2)    --------->YAB1 -MYB83--------->LBD16      --------->ANAC46               <-----------TGA1<---------LBD16  <-------- -MYB46(1)                  --------->ANAC58               --------->TOE2(3)       --------->ICU4 -P--------->ANAC46       <---------ALFIN1    <---------YAB1<---------MYB52(1)     <---------YAB1 --RAV1(1)        --------->At4g35610--------->ATHB12      <-----------HVH21     --------->YAB1<-----   tttctactccagataacatcagcgtaacacactccacaatgagtgattgtgagtgaaacatcgtcagttgtaacagacctggatgatgatgattgtgtgt  27364400                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                           --------->TOE2(2)                       ------>ZmHOX2a(2)                  --------->YAB1          ==================================bZIP_DOF       ------>NtERF2                  <---------ICU4          --------->At4g35610                     --------->GLK1(1)    <-----------RAV1(1)                   ----------->RAV1(2)                     <---------GLK1(1) -    <---------MYB46(3)                    <---------TGA1a                        --------->ARR11(3) <  <---------GLK1(2)  --------->ZAT6       <---------ZAT2                         <---------ARR11(3) < -ANAC58 <---------ANAC58                 <---------At4g35610             <-----------RAV1(2)       - -ANAC46 <---------ANAC58                 --------->ZAT2      ============================HOX2a_HOX2a -ANAC58 <---------ANAC46    --------->YAB1--------->TOE1(2)  <------ZmHOX2a(1)  ------->TEIL    <--- ------HVH21     --------->ICU4     ------->TEIL  <---------ZAT6 ---------->DOF2 <---------AGP1------   caaagattgttgcttgaaaatgatcactaaatcatatgaatctcacctgcgagtgatagtatgaggagaaagaagaccagatggatctcttgcagcccaa  27364500 --------->ANAC58                                                             <---------ATHB12 --------->ANAC58                                                        --------->ANAC58 ------>MYC2                                 --------->MYB52(1)          --------->ANAC58 -------MYC3                               <---------MYB52(2)            --------->ANAC46          -- -------MYC2                        --------->TOE2(3)                 --------->DEAR3(1)      ------- ------>MYC3                <---------ARR11(3)                    <---------ZAT14    <---------ANAC46 ------ALFIN1               --------->ARR11(3)                    --------->ZAT18    <---------ANAC58 ----->RAV1(1)  <---------ALFIN1    <----------DOF2               --------->ZAT14    <---------ANAC58   cacatgcactcgttttccacactctctgaagaactcatctttaaaactaactgatagagaaacaaaactgcacagacgaaatcaatagcgtcgagagtgt  27364600                                 ------>ZmHOX2a(2)                                <---------At4g35610                               <---------AGP1                            <--------P                            <---------WOX13(1)                           <-------GAMYB                          <---------MYB46(3)                                     ------------>CBF                        <---------MYB52(1)                          <----------DOF2            <<<<<<<<<TBF1<---------AtMYB61   --------->AtMYB61     <---------ANAC58 -------->DOF2      <XXXXXXXXXXXXXXXXXXXXMIR3440B-3P               <---------ANAC58      --------->WOX13(1) ---->GT1<<<<<<<<<TBF1 <----------DOF2------>ZmHOX2a(2)   <---------ATHB12    *TSS     ------------>CBF   ataaagtcttcttcttcttcgcttcctttggttgatctgatccaaaaccaaaacagagtaatcaattttgcttttgcaagtgattcaatttcaatctggt  27364700                                              <-----------GT1                                           <---------ICU4                                     -------            <---------ANAC58               --------->YAB1                                  <---------ZAT6            <---------ANAC46      --------->DAG2                                           ----------            <---------ANAC58      ---------->DOF2  ------>MYB83                     <---------WOX13(1)         <-----------GT1         ---------->DOF2   ------>MYB46(1)               <---------YAB1   ctggtgttttttttccttggactcacttacaaacaaaaaggcccattataacccaacaaggcccatttaagttgaaatcgattttgatttatactgtaaa  27364800                          --------->ANAC58                          ----------------->AGL1                          <-----------------AGL1                          --------->ANAC58                          <------NtERF2                         ------>NtERF2                        <---------ALFIN1                   --------->ARR11(3)                        --------->DEAR3(1)         --------->At4g35610                *TSS --------->ANAC46              <---------At4g35610              --------->ANAC58            >>>>>>>>>>>>>AGL25                             <------ZmHOX2a(2)              --------->ANAC58         --------------->AGL15                            <-----------ARR10              --------->ANAC46         <---------------AGL15                           <------NtERF2           ----------->HVH21          <-----------------AGL3                         <---------ANAC58         <---------At4g35610       <------ZmHOX2a(1)       <---------ARR11(3)        <---------ANAC46         ----------->RAV1(2)       ================================HOX2a_HOX2a       <---------ANAC58  <----------DOF2    --------->ANAC58 ----------------->AGL2               --------->MYB46(3)     <-- --->DOF2--------->At4g35610  --------->GLK1(2) ---------->DOF2   <----------ID1    <---------LBD16<- ->GT1  ------->TEIL --------->ANAC58 ----------------->AGL3<------ZmHOX2a(2)     <---------DEAR3(1)<   gactcttttgcatctgacgcaaaacgccaccgaatcaggaaccaaaaatagaaagctgcaagatcaagaagacaaaaaccatcgatggcggatcaaaacc  27364900                                  <---------TOE2(2)                                  <---------TOE1(2)                               --------->YAB1                               --------->ATHB12                              <---------YAB1                          ------>ZmHOX2a(2)                         --------->GLK1(1)                         <------ZmHOX2a(2)                        --------->ARR14(2)                        <---------ARR14(2)                        <---------ARR11(3)                        --------->AGP1                        <-----------ARR10                                                 ------>ZmHOX2a(1)        --------->ANAC46<---------AGP1                                                   --------->TOE2(3)  <---------ANAC55(2)   --------->ARR11(3)                                            --------->ARR14(2)  ----------->GT1      --------->At4g35610                                            <---------ARR14(2) ---------HVH21        <---------CCA1(2)                        <----------DOF2    --------->MYB52(2) -----ZmHOX2a(2)    <------ZmHOX2a(2)                 ---------->DOF2             <-------TEIL -----------RAV1(2)<-----------HVH21            ----------->GT1 <---------DAG2 <---------YAB1     <--   gatcaggtaaacacaatgaacgatcagatctcatcataggtttatgcatattgttaaaaaggaagactttttgatcaagttatgttcgtttcctcaaatt  27365000                 <-----------------AGL2              --------->ANAC58              --------->ANAC58                                             --------->YAB1              --------->ANAC46             <---------HSFB2a(1)            --------->ICU4              <---------O2                 --------->HSFC1(2)             <---------YAB1          <-----------GT1             ------>ZmHOX2a(2)              --------->ANAC46       <---------ICU4                XXXXXXXXXXXXXXXXXXXX>MIR779.2   --------->bZIP60(2)    --------->YAB1           <------MYB83  --------->HSFB2a(1)       --------->ANAC58           <----   <<<<<<<<<ARR2 <-----------------AGL3    <---------HSFC1(2)        --------->ANAC55(1)      -------   <---------ATHB12 <---------YAB1<---------YAB1                     --------->ANAC58         <------ ---------GT1 --------->O2   <------MYB46(1)       ---------->DOF2 <---------ALFIN1      <---------YAB1   tcacaatcaaaattacacgtctattaatggatggttttgatcggaaatttctctaaagaaacaatagaaacacgccatgataagtctatttttgattcgt  27365100                                                 <---------ANAC46                                    <----------DOF2  --------->GLK1(1)                          <-----------ARR10      <---------ANAC58                          ------->TEIL           <---------ANAC58         ---------->ID1   --------->GLK1(2)     --------->MYB59    <---------MYB52(1) --------->ANAC58     --------->ATHB12 -----MYB52(1)         --------->ANAC46    <---------AHL20(2) -->MYB52(2)           --------->ANAC58    <---------YAB1               ----------->GT1 ---MYB46(3)    <---------YAB1      <---------MYB52(1)          <------ZmHOX2a(1)   tgctctgttttgtctcttatgaaacacgaatctaaaccctttgttttaattgggtatttccacagaggagaagactgtgaaatcgccaaatgtgtttgaa  27365200  Previous    Next  AGI:  At1g72680.1    Description:  cinnamyl-alcohol dehydrogenase, putative. similar to mannitol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT4G39330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62864.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-containing, conserved site; (InterPro:IPR002328); contains InterPro domain Alcohol dehydrog Range:  from: 27362894    to: 27364678    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g72690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57000.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45662.1) Range:  from: 27364816    to: 27365581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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