Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ===                                                                                                  <--                                                                                       <---------ZAT18     --------->ETT(2)                                                                  --------->ZAT18  --------->ANAC46                                                                  <---------ANAC58  --------->ANAC58                                                           <-----------RAV1(2) <xxx  --------->ANAC58                                                    --------->At4g35610--------->ZAT18 ------->TEIL                                                        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------ZAT14                                                    --------->TOE1(2) <---------ANAC58 --->ARR14(2)                     --------->At4g35610             --------->TOE2(3) <---------ANAC46 ----ARR14(2)          <----------ID1--------->At5g28300 ---------->DOF2    <------NtERF2<---------ZAT14 -ANAC58              <------ZmHOX2a(1)               <------ZmHOX2a(1)     <---------ZAT2   <xxxxxxx -ANAC58           ------>NtERF2 --------->MYB52(1)  <----------ID1<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ctgcacgtagacagcgtttgccgaggagacaaacccagcggtaatggagccagtaaggacaaagagaacctcagaggcaccagggtgagtgtgcattggg  27343300                                                                  --------->ZAT2                                                                  --------->At4g35610                                                             <---------At4g35610                                                             --------->At4g35610                                                         --------->LBD16                    <-------GAMYB            --------->At4g35610                         <---------LBD16                    <---------ANAC46          <------ZmHOX2a(1)                            <---------LBD16                     <---------DEAR3(1)     <----------DOF2                                 --------->ARR14(2)                   <------NtERF2 <---------ALFIN1                                    <---------ARR14(2) ---------->DOF2 <---------DEAR3(1) ================HOX2a_HOX2a                      <xxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------At4g35610 ----ZmHOX2a(2)                                 <-----------HVH21 <---------ZAT2  ----------->HVH21 xxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------WRKY18(1)    <---------At4g35610  --------->At4g35610 xxxxxxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->ALFIN1    <   atcacacctttaggagctaagtcaagtctagctgtagagaggcctagaccgttcagacccgggaactgagctgcgaaagcgggtgtgacagcggcgttga  27343400                           --------->ANAC58                           --------->ANAC58                   <---------ANAC58                   <---------ANAC58                  <------ZmHOX2a(1)                --------->LBD16               <---------HSFB2a(2)                               <----------ID1        <-----------RAV1(2)               --------->HSFB2a(2)                          --------->ATHB12          --------->LBD16               <-----------RAV1(2)      ---------->DOF2    <---------YAB1            --------->ANAC46         <---------ZAT6    --------->ANAC46           ----------->HVH21             ------->GAMYB <-- ---------YAB1 <---------LBD16      <----------ID1  <----------DOF2                 <---------LBD16 <   tgatgtttgtagtgtttccaggagtgcctaagccagagaagacaaagtctgtagctttgacatgaatgggacgaatgcaagggtaacccgcaggggtttc  27343500                                                                               --------->ANAC58                                                                               <---------ANAC55(2)                                                                               --------->ANAC58    <<              ----------->HVH21                                                --------->ANAC55(2)<--              <---------ETT(1)                                                 --------->ANAC46   <--              --------->ANAC46                                                --------->ZAT18     <--       <---------TOE1(3)<---------ARR11(3)                                <---------------AtSPL8 <---       <---------TOE2(3)--------->ARR11(3)                                <---------------AtSPL3<----      <-----------RAV1(2)                                                <---------ARR11(3)   -------      =====================RAV                                           --------->ARR11(3)<---------AtLEC2  <----------DOF2      --------->GLK1(1)                       --------->CCA1(2)  ----------->RAV1(1) -------At4g35610      <---------GLK1(1)                     --------->CCA1(2)<---------ZAT18 <------ ---------ZAT18----------->RAV1(1)                 ---------->DOF2   <------ZmHOX2a(1)   <---------YAB1   agcgcgtttcaggtttgcgacacagaaatcttgaacagaggcattggatagagcaaagagaagagataagaggaagatagtacgcaacattttgaatggt  27343600                        <---------DAG2 <<<<<<<<MYB80          <----------DOF2 -------MYB46(3) --------->ZAT18 ----MYB46(1)<---------------AtSPL8 ----MYB83   --------------->AtSPL8                                                                 < ------AtMYB61   <---------ZAT18                                  <---------ANAC46      --------->ALFIN1 ----P  <------ZmHOX2a(1)    <----------DOF2                     <---------LBD16      <---------ANAC46 -->ATHB12  --------->ARR11(3)        <-----------GT1         <-----------HVH21       --------->ALFIN1 ---MYB46(3)<---------ARR11(3)    <----------DOF2        ------>ZmHOX2a(1)--------->AHL20(2)        -   tggtttaagaggaagatagtactctacttttcttttctttttccctactcttctcactcctctcggtctcgggtgtttatatagagaggtgtgggataaa  27343700               ---------->DOF2          --------->TOE1(2)         <---------KAN4(1)      *TSS--------->KAN4(2)   ----------->GT1   <---------ANAC46  --------->ALFIN1                         --------->ICU4                                     <------ --------->ZAT14                  <---------HSFB2a(2)                                   --------->ANAC58 <---------ZAT14                  --------->HSFB2a(2)                          <---------MYB52(2)  <- ---------ANAC46               <----------DOF2   ------->TEIL      <---------ALFIN1     --------->ANAC46 -------->ALFIN1          --------->CCA1(2)<---------YAB1       <------ZmHOX2a(1)       --------->ANAC58   ctgtgtggtgaacattcgaaagacggagataagcttttagaaaccattatggacgtccaagaagaaggaccactcttagaaacaaacaaaacgcctcttt  27343800                                                                                                  ---                                                 <---------REM1(1)                  --------->GLK1(1)                                          <---------TOE2(3)                         <---------GLK1(1)                                      --------->YAB1<---------ETT(2)    <---------MYB46(3)       <---   <---------ANAC58                   ------>ZmHOX2a(2)            <---------YAB1  --------->ARR11(3)   <---------ANAC58                 --------->ARR11(3)        <---------ICU4       --------->ARR14(2) ----DOF2                   ------>ZmHOX2a(2)   <---------TOE2(3)<-----------GT1   <---------ARR11(3) ---------DOF2     --------->ATHB12 <---------ARR11(3)     --------->YAB1          <---------ARR14(2)   tctttgcctgcctgttctgcatcatttagatcgctggtgatcttaatgttgatgtagacactgatatttactattggttgaagaagatttccaattttta  27343900                                       <---------WRKY12                                       <---------WRKY38(1)                                      --------->WRKY18(1)                                     <--------ZAP1                                     <-----------HVH21                                  --------->LBD16                                 <---------ANAC46                                <---------ZAT14                         --------->At4g35610                                ---------->DOF2       <--     ---------->DOF2     <---------At4g35610                        ---------->DOF2               <--    <---------REM1(1)    --------->ZAT14                          --------->AHL20(2)           <----- ------>YAB1             <---------ZAT14                          <---------AHL20(2)      <----------DOF2 ------YAB1 <---------MYB52(1)  <---------LBD16        ------------------------>ANAC81 <-----------GT1   tcatagatgaagccgttgatttcggactgcagactgcggggtcaagggttttgagaagaacagacaaattaaaagacatcaagctcaattttcttttctt  27344000                                                                                     --------->MYB52(2)                                                                                     ----------->GT1                                                                                     --------->MYB111(1)                                                                                     --------->MYB46(2)                                                                                     <---------MYB46(3)                                                                                    <--------P                                                                                  <------MYB46(1)                                                                                  <---------ANAC58                                                                                  <------MYB83                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                 <------MYB83                                                                                 --------->MYB59         <-----------GT1                                             <-----------------AGL2     <---------ARR14(2)                                       ==========================MYC_MYB     --------->ARR14(2)                                       --------->ANAC58   --------->MYB55(2)     <-----------ARR10                                        ======================================bZIP_DOF   --------->LBD16                                            ==========================MYC_MYB  <---------ANAC58                                            --------->TGA1a    --------->MYB111(1)  <---------ANAC46                                            <---------TGA1a    <------MYB46(1)  <---------ANAC58                                            <---------ANAC55(2)<---------MYB46(3) <---------LBD16  <---------ANAC46              <-------TEIL  --------->ANAC58 <--------P---------->DOF2 -------ANAC58    <---------ANAC58            <-------PIF5    --------->O2     <<<<<<<<<MYB98 -------ANAC58    <---------ANAC58            ------->PIF5    ========================MYC_MYB -----DOF2     ---------->ID1                --------->ANAC46 <---------O2    <-------GAMYB       <--   tcttgcggatttaacttgttgcttaagtaagtagaagagagcattccacgtccataagacagacacgtctaactacattgggttgggtagttaaagactt  27344100                                                              <---------TOE2(3)                                                             <---------DOF5.7(2)                                                        <---------TOE2(3)                                                   <------MYB83<---------ANAC46                                        <-----------HVH21   --------->WRKY12         --------->ALFIN1                                   <---------ARR11(3)   <---------TOE1(3)     <------ZmHOX2a(1)          <---------YAB1           <---------GLK1(2)   <---------DOF5.7(2)<---------TOE2(1)        --------->YAB1             --------->ARR11(3)  ---------->DOF2    <---------TOE1(1)       --------->ICU4            ----------->ARR10 ----------->GT1     <---------ARR14(2)       -----       <---------YAB1        --------->YAB1        <------MYB46(1)     --------->ARR14(2) <---------ARR14(2)  <---------ZAT6          ---------->DOF2          <---------ANAC46    <---------ZAT14    --------->ARR14(2) -------YAB1   <---------ZAT14 --------->CCA1(2)  --------->MYB59   <---------ANAC46 ----------->GT1   attagagttattatgagtgaagaagagccaaagataagattttgtcacaagttgggttaaagttgacgtagagtatacgaggacaaggtgtgaatacgaa  27344200  Previous    Next  AGI:  At1g72610.1    Description:  GLP1 (GERMIN-LIKE PROTEIN 1); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 3 member 1 precursor (GLP1) [Arabidopsis Thaliana] (GB:P94040;GB:O04751;GB:Q96265); similar to GLP3 (GERMIN-LIKE PROTEIN 3), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G20630.1); similar to Germin-like protein 1 precursor (GB:P46271); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type Range:  from: 27342776    to: 27343706    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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