Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->GLK1(1)                  <----------DOF2   <---------TOE1(3)               <---------GLK1(1)                ---------->ID1                <--   <---------TOE2(3)           --------->ANAC58                    <-----------GT1                ---  <---------DOF5.7(2)         <---------LBD16                 <---------AHL20(2)             <------- ----->ZmHOX2a(1)         ----------->HVH21                 <---------RVE1(1)           <----------DOF2 ------->TOE2(3)    --------->MYB52(2)                      <---------CCA1(1)        <---------ARR11(3) ------->TOE1(3)    <---------ANAC58                       <---------GLK1(2)         --------->ARR11(3) ----ANAC58         <---------ANAC58                       --------->ARR11(3)    ---------->DOF2  <-- ----ANAC58        <-------TEIL--------->ANAC58            <---------ARR11(3) <---------ANAC46<------   tccttaacgtttttagacgcgttcgtgtctgactcggaactcagtttgactcaaactagaagatttttttttcttttttttcgtaaagacctttttttat  27311800         ----------->GT1      <<<<<<<<<<MYB80      XXXXXXXXXXXXXXXXXXXX>MIR159A  --------->ANAC58     XXXXXXXXXXXXXXXXXXXX>MIR159B   --------->ANAC58 -------AHL20(1)                  ---------->DOF2 ------>AHL20(2)           <----------DOF2                            <---------HSFB2a(2) --AHL20(2)             --------->ARR11(3)  --------->AHL20(1)        --------->HSFB2a(2) -------AHL20(2)        <---------ARR11(3)  --------->ARR11(3)   <----------DOF2 ---AHL20(2)           <---------CCA1(2)   --------->AHL20(2)<----------DOF2             <----------DOF2   tttattttggtttgaaaaaaactctaaatcttttgctaaagcaaaatatatggtgatgcaagtctttcttttttagaaggtagcaatatttcttttgttt  27311900                                 <---------ANAC58                         <---------ANAC58                         <---------ANAC55(2)                         --------->ANAC55(2)                         <---------ANAC58                     <---------------AGL15                     <---------DAG2         ---------->DOF2             ---------->DOF2     <---------ANAC58                  <---------ARR11(3)       --------->ALFIN1  <---------ANAC46--------->TOE2(3)         --------->ARR11(3)              <-    --------->DAG2  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            --------->GLK1(2)             <---   ---------->DOF2<-----------GT1<---------ANAC46       <---------YAB1             ----------->GT1---   tgagtaaaagtgttggaaagttaccttacgtagttacgttgaacattaaagtgtccgtattattcagaaaatctaacaacaagttttgaaaaattcgcgt  27312000                                                               --------->KAN4(2)                                                              <----------TaMYB80                                                              --------->HSFC1(2)                                                              --------->HSFB2a(1)                                                              <---------KAN4(1)                                                              --------->KAN4(1)                                                              <---------HSFB2a(1)        <------NtERF2                                                             <---------ARR14(2)         ----------->GT1                                                             --------->ARR14(2)        <---------DEAR3(1)                                                  <---------ANAC55(2)               --------->ZAT18                                                  --------->ANAC58                 --------->ALFIN1                                                  --------->ANAC46                --------->REM1(2)    <---------AHL20(2)         --------->ATHB12   ----------->GT1                --------->ALFIN1   <---------AHL20(2)   --------->AHL20(2)        --------->ANAC58              ------->MYC3  -------   <---------AHL20(1)   <---------AHL20(2)        --------->ANAC55(2)  --------->AHL20(2)<-----------   --------->AHL20(2)  --------->YAB1  ---------->DOF2       <---------KAN4(2)<---------------------- --------AHL20(2)     <---------YAB1<---------TOE2(3)        ---------->TaMYB80 <-------MYC3 -------- -------DOF2   ---------->DOF2<---------YAB1      --------->ANAC55(1)  --------->YAB1 <---------ORA47(1) ------>AHL20(2) ----------->GT1 <---------WOX13(1)<---------MYB52(2) <---------ATHB12--------->SPL7   tttaatttttttgttagcaaagttataaaaatatgattgacgaaagaaaaacaagtaacaacgaatattccaattaaaaaaacgtgtggacggcgaaaag  27312100                                                                 <---------YAB1                                                               --------->YAB1                   -----                                                               <---------ICU4               ---------                                                               <--------HAHB4            ------>MYB46(1)                                                         ------>MYB83                    ------>MYB83                                                         ------>MYB46(1)               <-------------                                                       --------->MYB46(3)              ------->GAMYB                                                       <---------MYB55(2)              --------------                                                      <---------At4g35610             <--------------                                                      ----------->RAV1(2)             ---------------                                                      --------->ZAT2                  --------->MYB46(3)                                                      <---------ZAT2                  ---------------                                         --------->AHL20(2)   <---------YAB1         --------->ANAC58  <----------DOF2                        <---------AHL20(2)   --------->ICU4     --------->ANAC58 -->DAG2                                 ----------->TBP--------->MYB55(1)       --------->ANAC46 ----------WRI1            <----------DOF2     --------->At4g35610<---------AHL20(2) --------->ANAC58 -TaNAC69(2)   <----------DOF2    --------->ANAC58    --------->At4g35610    *TSS--------->ANAC58 -->DOF2      <---------DAG2      --------->ANAC58<-----------HVH21         --------->YAB1 --------->AHL20(2)   ctctctttcggtcttcccttttgctctctctttctcaaggcatataaatagctgtcacctgccgattattatttgtaatcagaacgcaaccaaataaaga  27312200                                     -------->P   <---------MYB52(2) ----->DOF2                         <-----------GT1 ->DOF2                          --------->ARR11(3) --------->MYB52(1) --AGL15                         <---------ARR11(3)------->GAMYB          <----------DOF2 ->AGL15                        <---------CCA1(2) <---------MYB46(2)     <---------ANAC58 ---AGL3                    <---------DAG2<---------ARR11(3)             <---------ANAC58 -->AGL2                    <----------DOF2 --------->YAB1        <---------AHL20(2)   --------->ARR11(3) -->AGL3                --------->REM1(1)<---------CCA1(2)   <----------DOF2  <---------At4g35610   aagctctcaaactcagtcttgaagcttcaactttatatctaccatatcatcaactaactaattctttttaaaatggctttagctaatgagataatgggtt  27312300                                 <---------ARR14(2)                              <---------ANAC58                     --------->YAB1                     <---------ICU4                  <---------------AGL15                    <---------YAB1                --------->ARR14(2)                  --------->YAB1 --------->ARR14(2)  --------------->AGL15                 <------ZmHOX2a(2)                <---------ARR14(2)                             <---                <---------ARR11(3)               <---------CCA1(2)                         xxxxxxxxxx                --------->ARR11(3)    <---------MYB52(1)                                   --------->MYB46(3)           <---------HSFB2a(2)<---------ANAC46 <---------ANAC58                            --------->AtMYB61           --------->HSFB2a(2)<---------ANAC58 <---------ANAC58              <---------ZAT14 --------   ctcgtctaatcttcgagagatcatcatcacttgcgtctccgtttcattcgcgtttctccatcaagaagaagacacagagaacacagttctccatcaaccc  27312400                                              ------>NtERF2                                             --------->RAP2.6(2)                                       <---------REM1(1)                                     <-------GAMYB                          <---------ANAC58                                    <---------DEAR3(1)     <---------ARR14(2)                                    <---------ANAC46       --------->ARR14(2)                                   <------NtERF2          <------ZmHOX2a(1) <---------ANAC58      --------->LBD16        ---------->DOF2<---------RAP2.6(2)<------MYB46(1)             <---------DEAR3(2) -------DOF2           --------->DOF5.7(2) <---------At4g35610 ----------->GT1            <---------At1g77200 xxxxxxxxxxxxxxxx>smallRNA(le3)  <---------DEAR3(1)      ----------->ARR10  <---------ANAC46<-------GAMYB >P ------>ZmHOX2a(2)  <---------MYB52(1)  --------->At4g35610 <------MYB83------>NtERF2<-----------HVH21   ttttgatccgagacctatgagagccgttaactcaagcggcgttgtagcggccatcagcgaggatttggttaaaacgctgcgtattagcactgtcggtaga  27312500                                        <---------TOE2(3)                             <---------DEAR3(2)                                        ---------->DOF2                             <------MYB46(1)                 --------->ALFIN1     <---------ARR14(2)                            <---------DEAR3(1)         ----------->HVH21          <---------ARR11(3)                     <------ZmHOX2a(1)  <---------TOE1(3) <---------DEAR3(1)     <------ZmHOX2a(1)            <------ZmHOX2a(1)<------MYB83          --------->At4g35610     ---------->DOF2        <--         <------ZmHOX2a(1)  <---------DREB2C(2) <---------ZAT14  <------ZmHOX2a(1)--------->ARR14(2)   aaacaagagaaggaggaagaagaggagaagtcggtgaagtttaaggtgagagcagttgcgacggtgaggaacaaaaacaaagaggattttaaagaaactt  27312600                           <---------AHL20(2)                                --------->ANAC58                          --------->AHL20(2)                   --------->ANAC58       --------->ICU4                         <---------------AGL15                 --------->ANAC58     <---------ICU4                       --------->YAB1                    <---------YAB1      --------->ANAC58       <                      <---------ZAT6          <---------ANAC46--------->ZAT18--------->ANAC46     <-- -------MYB46(3)<----------DOF2 ----------->GT1     <---------At4g35610   ------>ZmHOX2a(2)   <------   tggttaagcatttggatgcttttactgataaaattggtagaaacgttgtcttggagcttatgagtacccaagttgatccaagtaagtcattactaatttt  27312700  Previous    Next  AGI:  At1g72520.1    Description:  lipoxygenase, putative. similar to lipoxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G67560.1); similar to LOX2 (LIPOXYGENASE 2) [Arabidopsis thaliana] (TAIR:AT3G45140.1); similar to LOX3 (Lipoxygenase 3), iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Arabidopsis thaliana] (TAIR:AT1G17420.1); similar to lipoxygenase [Nicotiana attenuata] (GB:AAP83138.1); similar to lipoxygenase [Sesbania rostrata] (GB:CAC43237.1); similar to 13-lipoxygenase [Solanum tuberosum] (GB:CAA65269.1); contains InterPro domain Lipase/l Range:  from: 27312177    to: 27316416    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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