Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->AHL20(2) --->ANAC46 --->ANAC58                           <---------ANAC58 --->ANAC55(1)                   <----------DOF2 ----->GT1               <-----------GT1                                                           -- --->ANAC55(2)      <------MYB83 <---------DAG2                                                    <- --->ANAC58         <------MYB46(1)   <---------ANAC58 --------->REM1(1)                          <-- ----ANAC55(2)  <---------MYB46(3)    --------->ANAC55(2)       <---------YAB1                  <---- >HVH21     <---------YAB1    <---------ALFIN1       <-----------GT1                    ----------->GT1   taaaaaatatagttttgatagttggttttacaacacttttacttgatagttgttcttacaacacttatacttgtaattaagtcacttctacggtttaaaa  27282800                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(1)                                                                                       <---------ARR11(3)                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)               --------->YAB1                                                      <-------TEIL     <---------HSFB2a(2)                                                    ------->GAMYB     --------->HSFB2a(2)                                                   --------->MYB46(3)   <---------AHL20(2)                                                     ------>MYB83<---------GLK1(1) ------->AHL20(2)                                                         -------->P  <---------CCA1(2) --------AHL20(2)          <-----------------AGL1         <---------YAB1  ------>MYB46(1) -------AHL20(2)      <----------DOF2 <---------ANAC58   --------->TOE2(3)--------->ANAC58    <------ -----ICU4  --------->TOE2(3)         <---------ANAC58  <---------ICU4    --------->ANAC58<----------DOF2   attatttatagaaacgataatcaactttgtccaagtttgggcttggaaactaaaatcaacattattcatatgggccaaccaaaaatgcatatctttagct  27282900                                                        <------NtERF2                                                       ------>NtERF2                                                      --------->ANAC58                                                      --------->ANAC58                                                      --------->ANAC46                                                     <---------LBD16                                                 --------->KAN4(2)                                                --------->KAN4(1)                                                --------->HSFC1(2)                                                <---------KAN4(1)                                                <---------HSFC1(2)                                                <---------HSFB2a(1)                      ------------>CBF          --------->HSFB2a(1)              ------------>CBF                 <----------DOF2               ------->TEIL                ------>ZmHOX2a(1)        -                 <---------DAG2                <---------KAN4(2)           =====================HOX2a_HOX2a                <---------ANAC58             ------->GAMYB          <---------TOE1(2)    <------ZmHOX2a(2)   <---------AHL20(2)<-----------GT1        <---------MYB52(2)     ------>ZmHOX2a(1) <---------ATHB12 ---At4g35610   <---------ANAC58            --------->MYB46(3)     =============================HOX2a_HOX2a   tattttttattcgctcttgcttttctcaatcttcttgactctttcaacgaacattcgcgccataagctcctaagttcctctcatccaatggatcacaaat  27283000                                                          ----------->GT1                                             --------->ANAC58                                    <----------ID1--------->ANAC58           ---------->DOF2  <----------ID1   --------->ANAC58                 --------->MYB46(3) --------->DOF2  ----------->GT1---------->DOF2   --------->ANAC58 ----------->GT1   gacaaagaaaaacaaaagacagagaaaacagagacaaagcgagaaacaagacaaggaatacagaaaaattagtaaatcgaatcaccaaaaaaaaaaaaaa  27283100                                                        <---------LBD16                                                     --------->ZAT2                                                     <---------ZAT2                                               --------->RAP2.6(2)                                               ------>NtERF2                                              <---------DEAR3(1)                                              --------->DEAR3(1)                                             --------->ATERF1(1)                                             <------NtERF2                                            ------>NtERF2                     <---------ANAC46                                            <---------ATERF1(1)               <---------ANAC58                                            --------->LBD16      --------->AHL20(2)             --------->YAB1               <---------LBD16 --------->LBD16<---------ANAC58          --------->WOX13(1)    <---------ANAC58    ----------->ARR10    <---------ANAC58        <---------WOX13(1)      <---------ANAC46<------NtERF2  --------->ANAC55(2)               ----     <---------YAB1             <---------ANAC58------>NtERF2  <---------ANAC55(2)    --------->GLK1(2)   <----------DOF2     ---------->DOF2   --------->MYB52(1) <---------MYB52(1)<---------ANAC58  <----   aactactttgattaatcaaaaaaaaaaaagagttgcttgaaactcccggcggcctagctccggttaagtaaatggccgtggcttggctaatctggccaat  27283200                                                  --------->ATHB12                                                <----------DOF2                                             --------->GLK1(2)                                         --------->YAB1                 <---------DAG2     ------->GAMYB<---------YAB1     --------->ZAT6       <---------ARR14(2) <---------ARR11(3) ----->YAB1      <----------DOF2 --------->MYB52(1)                   ------>ZmHOX2a(1) -----ATHB12------->GAMYB --------->ARR14(2)<---------GLK1(2)        --------->TOE2(3)      <--------   cgtgctatctctaacagcactttctgcgaattcgataaccgaatcagaatctttattgaaattcaagaagtccttaaacaacaccaagtctcttgattct  27283300                                         ------>ZmHOX2a(2)                                       <---------ARR14(2)                         ===================                                       --------->ARR14(2)                         <------ZmHOX2a(2)                                 <---------ATHB12                                <---------ARR14(2)                           --------->ANAC58                                      --------->ARR14(2)                           --------->ANAC46                                      --------->AGP1     -                           --------->ANAC58                          <----------DOF2   --------->MYB46(3) -GLK1(2)    <---------GLK1(2) --------->MYB52(1)     ----------->RAV1(1)     --------->HSFB2a(2)----   tggacaccagagtcagaaccttgtggagcaagccaacgatggatcggattactctgcaacaaaaactctgtctttggcctccagatcgaacaaatgggtc  27283400                                               ------->TEIL                                            --------->ANAC58                                  ------>MYB83--------->ANAC46                                  -------->P--------->ANAC58             <---------REM1(1)    ------>MYB46(1)             --------->bZIP60(1)<---------MYB111(1)             <-----------RAV1(1)<---------MYB59----------->RAV1(1)      --------->DAG2          --------->ARR11(3)                                         --------->LBD16     ---------->DOF2          <---------ARR11(3)                               ----------->HVH21   <------ZmHOX2a(1)      ---------->DOF2   --------->ANAC55(2)              --------->At4g35610 =========HOX2a_HOX2a  <---------MYB52(1)   --------->ANAC46    --------->MYB46(3)   -------->P<----- -------->YAB1        <-------GAMYB     <----------DOF2  --------->ICU4      <---------At4g35610 ----->WOX13(1)      ----------->GT1   <---------ICU4  --------->YAB1 <----------DOF2--------->MYB52(1)   tatcaggaaaagttgatgtcgctccgttaaaagacctaccatctttacgcaccataagcataatgaacaactctttctctggtgacatacccgagtttaa  27283500                    <----------DOF2    <---------GLK1(2)            --------->ZAT14     <------ZmHOX2a(1)     --------->MYB46(3) <---------------AGL15                                                  <-----    <---------At5g28300 --------->ANAC55(2)                                                ----------   --------->MYB52(1)  <-----------------AGL1                   <---------ICU4         ---------->DOF2   <-----------GT1  <---------DAG2--------->GLK1(1)         <---------YAB1        <------NtERF2<----- ------GT1 ----------->HVH21 <---------LBD16  ----------->GT1  <---------YAB1   <---------REM1(1)   cagattaaccgctctgaagtcgctttacatatcaggaaatcgattctctggtaacattccttctgattatttcgaaacaatggtgtcgctaaagaaagct  27283600                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC55(2)          -------->P                                                    <---------ANAC55(2)  <-----------HVH21                                                   <-----------GT1 ----ANAC58                          --------->ATHB12        <---------YAB1            <---------ICU4 >DOF2  --------->MYB46(3)      ------>ZmHOX2a(1)         <-----------ARR10         --------->YAB1  - ----ANAC58                     <---------CCA1(2)        <---------CCA1(2)       --------->YAB1<-----   tggctgtcaaacaaccatttctctggtctcattcctatctcattggcaactacattgccaaatctcattgagttacgcctcgaaaataatcaattcatcg  27283700  Previous    Next  AGI:  At1g72460.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G42880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45595.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 27283172    to: 27285195    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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