Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------DAG2                                    <----------DOF2                                 <-----------GT1                    <XXXXXXXXXXXXXXXXXXXXMIR407                            ----------->GT1          --------->ANAC46                        --------->AHL20(1)         --------->MYB52(1)                        <---------AHL20(1)     --------->YAB1       ---------->DOF2      <---------AtLEC2  --------->ARR11(3)     <---------ICU4 <---------ARR14(2)    <-----------GT1    --------->AHL20(2)     --------->ICU4  --------->ARR14(2) -----AHL20(2)       --------->AHL20(2)       <---------ATHB12<---------ARR11(3) >ATHB12           --------->AHL20(2)   <---------YAB1       <------ZmHOX2a(1)               <-------   aaaattttgcatttcaacaaaaaaaatatatagttaaactttatgctaataatcaacgaagcaggatactaaaagtatatgatataaactttggtcttta  27279600          <------NtERF2         <---------SPL7        <---------MYB46(3)       --------->ATERF1(1)       --------->SPL7      <------NtERF2      ------>NtERF2      <---------ATERF1(1)      --------->ATERF1(1)      <---------DREB2C(1)      --------->DREB2C(1)     <---------RAP2.3(1)     <---------SPL7     ------>NtERF2     <---------ATERF1(1)    <---------DEAR3(1)    <---------RAP2.6(2)    <---------RAP2.3(2)    --------->DEAR3(1)    --------->ATERF1(1)    --------->ATERF1(2)    <---------ATERF1(2)   <---------ATERF1(1)   --------->RAP2.3(1)   --------->ATERF1(1)   --------->At4g35610   <------NtERF2   --------->DREB2C(1)   <---------DREB2C(1)   <---------At4g35610   --------->DEAR4(2)  <---------DEAR4(2)  <---------RAP2.3(1)                                                                    ------>MYB83  <---------RRTF1(1)                                                                     ------>MYB46(1)  <---------ATERF1(1)                                                                    -------->P  <---------RAP2.6(1)                                                                  --------->DEAR3(1)  <---------ORA47(2)                                                                  --------->DEAR3(2)  ------>NtERF2                                                                   <---------ANAC58  <---------ERF1                                                                  <---------ANAC58 <---------RRTF1(2)                                                           --------->GLK1(1) <---------RAP2.3(2)              <---------AHL20(2)        ------>NtERF2     <---------GLK1(1) --------->ATERF1(2)              --------->AHL20(2)  --------->HSFC1(2)--------->ARR14(2) <---------DEAR3(1)            --------->AHL20(2)     <---------HSFC1(2)<---------ARR11(3) <---------RAP2.6(2)          <---------AHL20(2)      --------->HSFB2a(1)    --------->ARR14(2)     < <---------ATERF1(2)   <----------ID1                 <---------HSFB2a(1)    <---------ARR14(2)    <- <---------RRTF1(3)    ----------->GT1    <----------DOF2   --------->LBD16  <---------GLK1(2)     -- <---------DREB2C(2)  ----------->GT1  <---------ARR11(3)  <---------LBD16------>ZmHOX2a(2)        -- <---------RAP2.3(3)--------->CCA1(2)  --------->ARR11(3) <---------LBD16<------ZmHOX2a(2)       ---- ---DOF2--------->DEAR3(1)    --------->AHL20(2) <------ZmHOX2a(2)      <---------ARR14(2) ------->GAMYB   taggcggcggccgtcggaatagatagggaaaaataaataaatacctttgagatcgaattttccggcgagttcaagatcggattttcgagccaaccccata  27279700                                                                                         --------->WRKY12                                                --------->REM1(1)                      <-------GAMYB                                        --------->At4g35610                           <---------ANAC46                                        <---------At4g35610                        ---------->ID1                                        --------->ZAT2                         <---------ANAC58                                    <----------CDC5                            <-------GAMYB                                   --------->ZAT2                              <---------ANAC58          <-----------ARR10        ----------->RAV1(2)                        ------>NtERF2  --------->KAN4(2)                --------->At4g35610                     ------>NtERF2 --------->WRKY38(1) ---------YAB1                   <---------RAP2.6(2)                       <---------ATERF1(1) --------AHL20(2)                --------->ATERF1(2)                      --------->ANAC46 ------->YAB1                    <---------ATERF1(2)                      <---------DEAR3(1) ------->AHL20(2)              --------->MYB52(1)                        <---------LBD16 ----------->HVH21 ----->AHL20(2)         ------>ZmHOX2a(1) --------->ZAT18    --------->DAG2--------->LBD16          <   ttaatattcccaaaacttcccttctccttcaagtaccggctgagcagactacatctctgagaaaaattggacttctccggcgcttgtcccgttgacatac  27279800                               <---------ANAC58                          --------->ARR14(2)                          --------->ARR11(3)      --------->ANAC46                          --------->ARR14(3)      --------->ANAC58                          <---------ARR11(3)      --------->ANAC58                          <---------GLK1(2)      <---------------AtSPL8                          <---------ARR14(3)     --------------->AtSPL3                     ------->GAMYB               --------------->AtSPL8                   -------->P  <---------ANAC58<---------REM1(2)                  ------->GAMYB<XXXXXXXXXXXXXXXXXXXXMIR835-3P                 <---------MYB111(2) ----------->HVH21             <---------ARR14(2)                 --------->MYB46(3)<---------ANAC58                --------->ARR14(2)           <----        <---------YAB1  ----------->ARR10   <----------DOF2       --------->HSFB2a(1)           <---- ---------ZAT6   <---------MYB55(2)<---------ANAC58  <-------TEIL <------ZmHOX2a(1)  <---------ARR11(3)   tagtgtgatgaagattacaacaacccaagattttcttgtgtgacttctttacacgtacaaaaaatcgaggattccaaagagtatgtagatgttttgagct  27279900                                                                                                   ==                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                    --------->LBD16         <--------                                                      <----------DOF2                       <--------                                                     <---------ANAC58               ----------->GT1<-                        <-----------GT1              <---------ANAC46          *TSS --------->ANAC58                   <---------YAB1                    <---------ANAC58  --------->AHL20(2) --------->MYB52(1)        <-----------RAV1(1)                     <-----------RAV1(1)--------->LBD16  --------->ANAC58 -----DAG2      <---------YAB1               --------->GLK1(2)    --------->HSFB2a(2)     <---------- ------DOF2<---------MYB46(3)           <---------ATHB12  <-----------GT1   ---------->DOF2 <--------   ttttgctcatgtgttgttgttataaataaccaattctagccaataagtttctgtggcttttaacctctcccgaataaataaagaaaacgaaataacgtgt  27280000                                                                                               ------                                                                                         >>>>>>>>>MYB1                                                                                         >>>>>>>>>MYB2                                                                                        ------>MYB83                                                                                        ------>MYB46(1)                                                                                        --------->MYB52(1)       <---------AHL20(2)       <---------ANAC58                                      <---------MYB46(2) ============================bZIP_DOF                                                 <---------MYB59 -ANAC55(2)                     <---------ANAC58                                      <---------MYB111(2) -ANAC58                      <---------bZIP60(2)                                    --------->ANAC55(1) >ANAC55(2)                   <---------ANAC46                                       --------->ANAC58 -ANAC46                    --------->ZAT14                                          --------->ANAC58 -ANAC55(1)          ----------->HVH21                                  <---------DAG2<---------MYB111(1) ---------DOF2     <---------TGA1a   ------------>CBF                <-----------GT1 --------->ANAC46 -GT1 <---------AHL20(2)    <---------ZAT14                       ----------->GT1<-----------GT1 -ANAC58         <---------ZAT14--------->ALFIN1       <-----------HVH21<----------DOF2--------->MYB55(1)   tctttttttttatttagtctgaagtgacagtgatgtgtgtccaatatagaatgtttttgtcacgagttttgtaacttttttttttacacctaactgatcg  27280100                                                                                      <----------DOF2                                                                                      <--------------                                                                       <---------HSFB2a(2)                                                                  <---------MYB46(3)  ---------------                                                                 <---------YAB1      <---------------      <---------AHL20(2)    --------->MYB52(1)                 --------->YAB1      --------->GLK1(2)- >ZmHOX2a(2)             --------->ANAC46                     <---------YAB1 >>>>>>>>>TBF1     ------   atagacattttttttttttttttgaacacaaaactgatcaatagactaaacacacatttttcttatgatggttcaagaagaagaaattctttttatggtc  27280200                              ------>ZmHOX2a(1)                             --------->TOE1(3)                             --------->LBD16                             --------->TOE2(3)                             ----------->GT1                          --------->ARR14(2)                        --------->AHL20(2)    <---------YAB1        <---------ARR14(2)                        <---------AHL20(2)             <- --------->AHL20(1)       <---------ARR11(3)                    <---------AHL20(1)                 <- -AGL15                  <---------CCA1(2)                      --------->AHL20(2)              <---- >AGL15                ------>ZmHOX2a(1)                        <---------AHL20(2)     --------->AHL20(2) --AGL2         <---------AHL20(2)           --------->ANAC58   --------->AHL20(1)  --------->ATHB12 -------->YAB1 --------->AHL20(2)            --------->ANAC58  --------->AHL20(2)  --------->ICU4<--- --->WRKY18(1) <---------AHL20(2)        <-----------HVH21----------->GT1<---------LBD16      ------>ZmHOX2a(1)   aaacatattataggctattaatttcctatatcctcaaatgttttgtcacgaatagaaatagggaaataaattatatgcggaaaaaatgatttattcctat  27280300                                                  --------->ATHB12                                                 <---------YAB1                                             ------->MYC3                                             <-------MYC3                                            --------->ANAC58                                     <---                                            --------->ANAC58                               <------NtERF2                                          <---------ALFIN1                                -----------                                        --------->LBD16                                   ------>NtERF2                                        ------>NtERF2                                   <------NtERF2                                       <---------HSFB2a(2)                              --------->RAP2.3(1)                                       --------->HSFB2a(2)                             <---------RAP2.3(1)                                       <---------ATERF1(2)                             <---------ATERF1(1)                                       <---------ETT(1)                               <---------RAP2.3(3)                                       --------->ATERF1(2)       --------->REM1(2)    <---------DEAR3(1)                                    --------->ARR14(2)         --------->LBD16      --------->MYB52(1)                                    <---------ARR14(2)        <---------ANAC46      <---------DOF5.7(2) --------->ATHB12               <-----------------AGL1--------->ZAT14              --------->WRKY12 -------P                   <-------GAMYB<---------MYB52(1)--------->ANAC58        ----------->HVH21 --------WOX13(1)          --------->MYB52(2)<-------MYC2  --------->ANAC46      --------->At4g35610 -----YAB1                 <---------MYB46(3)------->MYC2  --------->ANAC58      <---------At4g35610- ------MYB46(3)           <-------TEIL<---------LBD16 <---------ZAT18 --------->GLK1(2)------>NtERF2-   ggttgattacaaaaatcaaactacaatgttcgttacaagttccggcacgttttcattgcacaagccgtgaagaaactgttgtaagttgacggcgacatta  27280400                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             <------ZmHOX2a(1)                                                                                        <-------GAMYB        --------->WRKY38(1)                                                            --------->MYB55(2)       --------->DOF5.7(2)                                           ----------->GT1   <---------MYB46(3) --------->DAG2  --------->AHL20(2)                                 <---------TOE2(3) <---------ANAC46 ------ANAC55(2) <---------AHL20(2)                             ----------->RAV1(2)   <---------AtMYB61 >RAV1(1)<---------DOF5.7(2)                               <-----------GT1          <---------MYB46(3) --------->DOF2 --------->AHL20(2)      --------->GLK1(2)  <---------At5g28300     <---------AtMYB61 -------->MYB52(1)            --------->PCF2              <-----------GT1     <---------MYB52(1)-----   cataaaggcgttaacccatttaattcattcgggtcccaagagtttctgttaaatactaatttacccttctgaggtaattcgtttagtggtggttaggata  27280500  Previous    Next  AGI:  At1g72450.1    Description:  JAZ6/TIFY11B (JASMONATE-ZIM-DOMAIN PROTEIN 6). Identical to Protein TIFY 11B (TIFY11B) [Arabidopsis Thaliana] (GB:Q9C9E3); similar to JAZ5/TIFY11A (JASMONATE-ZIM-DOMAIN PROTEIN 5) [Arabidopsis thaliana] (TAIR:AT1G17380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83805.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 27277727    to: 27279979    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version