Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                       ----------->HVH21                                          <--                             <---------ARR11(3)                                                  <---                            --------->YAB1                                                    <------            --------->DEAR3(1) ------>ZmHOX2a(2)                                             <-------  ---------->ID1 <---------ANAC58     <-----------HVH21        <------ZmHOX2a(2)    ----------->GT1-- -----------RAV1(1)        <---------ATHB12               <---------ANAC58      --------->MYB52(1)--- --------DOF2    <---------ANAC58    ----------->GT1      <---------ANAC58  --------->ZAT6 <--------- -GT1     <---------At5g28300--------->ARR11(3)           <---------ANAC46----------->RAV1(1)<-------   ctttgttgcattcaccgaggcttgccacaatgatctaaaccgtgacatagttctgaagttgctggatcaatgggaacaacactaactggttaatttcttt  27266900    --------->YAB1 ------>HSFB2a(2) ------>ANAC55(2) -------HSFB2a(2) ------LBD16 ----DOF2                                                                     <----------DOF2 --ANAC58           --------->TOE1(3)                                     <---------CCA1(2) ------->LBD16      --------->TOE2(3)                                  <------ZmHOX2a(2) ------>ANAC46   <-----------GT1                                      --------->ARR11(3) --GT1         <---------KAN4(2)      --------->YAB1              ---------->DOF2 --ANAC58 ----------->GT1           <---------WOX13(1) ---------->DOF2<---------ARR11(3)   ccggaatgaaaatggagaataaccttaatatcccatagattgataacaagaggttgcaaaagagaaatgaaagatcatctctttggaaactctagcacaa  27267000                                                  <---------At4g35610                        <-------                                      ------>NtERF2                 <---------ANAC55(2)      --------                                   <---------At4g35610              <---------ANAC58         --------                                   <---------ZAT14--------->At4g35610      --------->ATHB12  ========                                   --------->ZAT14--------->ZAT2    <---------ANAC46      <---------ARR14(2)                                <---------At5g28300                 <---------ANAC58      --------->ARR14(2)                       --------->ANAC58    --------->ARR14(2)  <---------ZAT6         <---------At4g35610                       --------->ANAC58    <---------ARR14(2)  ----------->GT1   <-------GAMYB         <---------ATHB12      <-----------GT1    <---------ZAT2   --------->MYB52(2) --------->At4g35610   cgcataacccaatgaagagagacttaagcaattttactgcagccctattcggagctgaagttatagggttacttgaatccttgggttgagcagaacccat  27267100         --------->LBD16        --------->LBD16                       ------->GAMYB       <---------LBD16      <---------------AGL15    <---------GLK1(1)       --------------->AGL15    --------->GLK1(1)      ----------------->AG   <---------GLK1(2)       <-----------------AG   <---------ARR14(2)      ----------------->AGL1   --------->ARR14(2)      <-----------------AGL1             --------->ANAC58 ----------AGL3           <-----------GT1    --------->MYB46(3)                       ----------->RAV1(1) --------->AGL3  --------->TOE1(3)           <---------MYB52(2)    ----------->GT1    <---------ALFIN1 --------->AGL2  --------->TOE2(3)<---------TOE2(3)           --------->ANAC58       --------->MYB46(3) ===========================================MADS_MADS  ---------->DOF2 --------->AHL20(2)   taatggattccctgaaaaaccttacattttcccattgaggcatttcaacaaacacttgaaagacaagaattgataaaatcacatcgacccacagacaaaa  27267200                ---------->DOF2               --------->AtMYB61            ------->GAMYB           --------->MYB46(3)           <---------MYB55(2)           <---------MYB52(2)                                                                       -          ------>MYB83                                                                  <------MYB83-          ------>MYB46(1)                                                      <------ZmHOX2a(1)    <         --------->MYB52(1)                                                  <---------TOE2(3) ------        --------->AtMYB61             --------->ZAT18                  --------->ANAC58 <------MYB46(1)        --------->TOE1(2)          --------->GLK1(1)                   --------->ANAC58--------->MYB59  ---------->DOF2       --------->GLK1(2)                 --------->GLK1(1)---------->DOF2   <-------   acaaaaaagaccaacgaccaaagaagaatccatagggaattgcacaaacaaaaacaagagaaatcaaatcgtcaagacaaaggatgagtttggtttcact  27267300       <----------DOF2     --------->At4g35610                                  <---------YAB1     <---------At4g35610                                 <------------CBF -------->At4g35610                                    <---------YAB1        <---------TOE1(3) ---------->RAV1(2)                        <---------ANAC58                  <---------TOE2(3) ---------At4g35610                        <---------ANAC58                 <-----------RAV1(2)   --- --->ANAC46            ------>ZmHOX2a(1)  --------->STY1(2)       <---------ARR11(3)         -------- ----GT1  --------->YAB1       *TSS       <---------STY1(2)       --------->ARR11(3)      -----------   tcacctgagctttcatgaagttgtccttcccttgagagtcttcttgctagtccccctcttattgttgagaccttctgttcaggttagagtgtttgacact  27267400                                                                                                    -                                               <---------ZAT18                                     --                                             --------->PCF2                                     <----                      --------->YAB1        --------->DEAR3(1)                                  <----                 <---------ANAC58          --------->ANAC46            <---------AtMYB61        <----                 <---------ANAC46          --------->ANAC58    <<<<<<<<<TAC1<-------GAMYB       <----                 <---------ANAC58          --------->ANAC58  <---------ALFIN1             <---------HSFB2a(2) -------->GT1   <------NtERF2            <---------AtLEC2  <---------ALFIN1<---------MYB46(3) <------ ->ZAT6       --------->ALFIN1       <----------DOF2       ----------->RAV1(1)            --------->HSFB2a(2) >HVH21  --------->MYB52(1)      <---------CCA1(2)  ---------->DOF2 <----------DOF2 <---------ARR11(3)   aagttaaaactaaacggtgtcgtttcataactcccatctctttgcacggcccactaaggcccaacactgtcttttggtcgttacaatttcttctagtaac  27267500                                                                                      ------->GAMYB                           <---------AHL20(2)                                       ------>MYB83                          <---------AHL20(2)                                        ------>MYB46(1)                          --------->AHL20(2)                                        -------->P                         <---------YAB1                                            --------->MYB52(1)                       -------->HAHB4                         -------->P           --------->MYB55(1)                       <--------HAHB4                         --------->ANAC58    <---------MYB111(1) --------->TOE2(2)     -------->ATHB1                      <---------At4g35610    <---------MYB111(2) --------->TOE2(3)     <---------AHL20(2)                  --------->At4g35610    <---------MYB55(2) ---------->RAV1(2)    --------->ATHB51                --------->ANAC46           --------->AtMYB61 ------>P              --------->YAB1         --------->TOE1(3)                   <---------MYB46(2) -----MYB59            <---------ICU4         --------->TOE2(3)     --------->YAB1--------->MYB46(3) -----MYB111(1)       --------->ICU4         ----------->GT1--------->MYB46(3)   --------->MYB46(3) - -----MYB52(2)        <---------YAB1        <---------TOE2(3) --------->ANAC58  -------->P  --------- -----MYB46(2)        <---------ATHB51 --------->YAB1  --------->ANAC58      <---------At4g35610  <-- -----GT1        ----------->GT1    --------->HSFB2a(2)--------->ANAC58      --------->At4g35610<----   taacctgagttcgaatcaaatgtaattattaatttcttctataatcaacgttaaaacaagcagcaacccataacaatttagctaccaaccgagtttatat  27267600                  <---------WOX13(1)            --------->TOE1(2)           --------->YAB1         --------->ARR11(3)         <---------ARR11(3)      --------->YAB1                  --------->ANAC58                                        <------     <---------YAB1  <---------TOE2(3)--------->ANAC46                                        <------ -------->ZAT6  <------ZmHOX2a(1)     --------->ANAC58                              <---------ALFIN1- >AHL20(2)<---------YAB1         <------ZmHOX2a(1)                           ---------->DOF2  <------ ---------GT1 <---------TOE2(2)--------->ANAC58                         <---------At4g35610   <------ -----AHL20(2)<---------TOE1(2)--------->ANAC58      >>>>>>>>>TBF1      --------->At4g35610----------   aaacactataatatcataggattgatgtaatgtaaggaacaagacagaagtagaagaagaagtcccatgaagtttgctgaaaagacacaccgagtgactt  27267700         <---------ANAC46         <---------ANAC58   --------->ATHB12   <---------ICU4                                                          -------->HAHB4   --------->YAB1                                                          <---------ICU4   -------->ATHB1                                                          --------->YAB1   <--------HAHB4                                                     <---------AHL20(2)  <---------ATHB12                                                   --------->YAB1  --------->ICU4                                     <---------HSFB2a(1)   --------->ATHB12 ---ANAC46                           <---------AHL20(2)             <---------YAB1 ---ANAC58    <---------ANAC46       --------->AHL20(2)   <----------DOF2 --------->ICU4          <-- -------->WOX13(1)   --------->WOX13(1)              --------->HSFC1(2)   <---------YAB1        <---- ---ANAC58 --------->ALFIN1    --------->YAB1        <---------HSFC1(2)<---------YAB1         ------- ---bZIP60(2) --------->ETT(1) --------->TOE2(3)     --------->HSFB2a(1)--------->YAB1      <-------- ->HVH21 <---------ANAC58<-----------GT1       ---------->DOF2 <----------DOF2             ------>ZmHOX2a(1)   gtcaatcattagcgtgtcggaatcaattaacaagcttaattaaacttagcaaagaaacttcttttctttgattataatgattagaacttcgtcctacgta  27267800  Previous    Next  AGI:  At1g72420.1    Description:  similar to auxin-induced-related / indole-3-acetic acid induced-related [Arabidopsis thaliana] (TAIR:AT1G17350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61795.1); contains InterPro domain NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 (InterPro:IPR013857) Range:  from: 27264856    to: 27267331    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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