Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                =====                                                                                                -----                                               --------->ARR14(2)                               =====                                        <---------LBD16                                      *TSS----                                        <---------At5g28300   <------ZmHOX2a(1)          --------->TGA2(1)                 <---------YAB1        <-----------GT1      --------->ALFIN1             <---------GLK1(1)               --------->YAB1 <---------HSFB2a(2)       <---------LBD16                  <---------bZIP60(1)              <---------ATHB12--------->HSFB2a(2)      <---------ANAC46                  --------->bZIP60(1)              --------->ICU4 <---------LBD16   <---------ARR14(2)            --------->CCA1(2) ------ <---------HSFB2a(2)      <---------ZAT14      --------->GLK1(2)   <------ZmHOX2a(1)<---------At4g35610   aatcgagaaattgcaaatgatgaacgacttctctggaaattttacggcgaatttgttttggggaggagaggagactgagaaatgagagatgatatcacac  27114100 ---------->DOF2 --->MYC4 ----PIF4 ----PIF5 --->MYC3 ----MYC3 --->PIF5 --->PIF4 ----MYC4 ----MYC2 -----O2 --------->ARR11(3) -----TGA1a ---->TGA1a    <----------DOF2                           <-----------GT1   <---------YAB1 ===========bZIP_DOF                                    <---------AHL20(2)<---------ARR11(3) ---->O2--------->REM1(1)                          <---------MYB52(1)     <---------AHL20(1) ===========bZIP_DOF                              <----------DOF2         --------->AHL20(1) <------- --->MYC2<---------ARR11(3)                  --------->ANAC58             --------->ARR11(3) -------- ------>OsbHLH66       <-----------RAV1(2)   --------->ANAC58 <-----------RAV1(1)         ---------->DOF2   gtgcaaagcgacatcttcttttgggccaggcccatttactcttacacaaggcctttatttaactgtgttgttcaaatatttttgttttaagtaaaagctg  27114200                                           --------->YAB1                                       <------ZmHOX2a(1)                                     <---------TOE1(2)                              --------->HSFB2a(1)                        <-----------GT1                              <---------HSFC1(2)                       <-----------HVH21         ----------->GT1      <---------HSFB2a(1)            --------->YAB1 <----------DOF2 --At4g35610                  --------->HSFC1(2)            --------->AHL20(2)          ------->TEIL ->At4g35610                 <---------KAN4(2)  <-----------GT1    <-------TEIL <----------DOF2  ----   acaaaaatgttcagaaaaaaaaaactttgggaattttcttaggaatcatataacatgtcaaaataaaaattcatgtcactttctttgatgaacatgaaat  27114300                         ------->PIF5                         ------->MYC4                         <-------MYC2                         ------->MYC2                         <-------MYC3                         ------->MYC3                         <-------MYC4                         <-------PIF5                        <---------ANAC46                        --------->TGA1a                        <---------O2                        --------->O2                                                           <-----                        <---------TGA1a                                                        <-----                 <---------ARR14(2)                --------->ZAT2                     --------->RVE1(1)                 <-----------ARR10                 <---------ZAT2                    --------->ARR11(3)                 --------->ARR14(2)                --------->At4g35610      ------->GAMYB<---------LBD16          <---------ANAC58     <---------ZAT6      <---------At4g35610    -------->P --------->GLK1(2)          <---------ANAC58 --------->REM1(2)   --------->O2        <----------DOF2   <---------ARR11(3)          <---------ANAC46--------->ALFIN1     <---------O2     <-----------GT1     --------->CCA1(1)     <---------ICU4   <---------ALFIN1         --------->ANAC46<-----------GT1      --------->RVE1(1) ----->AHL20(1) <---------CCA1(2) <-----------GT1 ------->TEIL<---------AHL20(2)  --------->AHL20(2)   atactaatttttgcttgcaaatctccacgtgtagagtcaccatttgtccacgtagctgaactattttatcttttctaaccccaaaaaaatctctggatgg  27114400                                                      <-----------ARR10                                                      ------->TEIL                                                      <---------ARR11(1)                                                      <---------ARR14(2)                      ----------->RAV1(1)             --------->ARR14(2)                     --------->MYB46(3)              <---------ARR14(1)                --------->TOE2(3)                    <---------CCA1(2)              <---------YAB1                       <---------ANAC58   --------->At4g35610------->GAMYB                <---------ANAC58 -MYB83    --------->ICU4                 --------->ANAC58   --------->ZAT6                    ------ -MYB46(1) <---------YAB1                 --------->ANAC58<---------CCA1(2)  ---------->DOF2  -------   tcatgagctagcgatgattcttaaccacagaaaacagacgatggaagcaagaagcgtatcttatctctacgtttcatattaaagcgcatgaaaacgaaca  27114500                                                                              <---------At4g35610                                                                              ----------->RAV1(2)                                                                              ------>NtERF2                                                                              --------->At4g35610      --------->GLK1(2)                                                     --------->RAP2.3(1)     --------->ARR14(2)                                                    --------->LBD16     <---------ARR14(2)                                                    ------>NtERF2     <---------GLK1(2)                                                     <---------ATERF1(1)     <---------ARR11(3)                                   ----------->RAV1(1)--------->DEAR3(1)     <     --------->ARR11(3)                              <---------ANAC58     --------->ANAC46       ---- ---------->DOF2                                     <---------ANAC58     --------->DEAR3(1)     <--- --------->YAB1                                  <-----------HVH21       <---------LBD16        <---- --->YAB1  <----------DOF2                   --------->TOE2(2)         --------->ANAC46    <--------- >TEIL--------->ARR14(1)   *TSS         --------->AHL20(2)================================RAV--------   taataaagattctcttttttttttttgaaaaatgctagaaaaataaacatgggtcacttgccacagagcctctactccgccgctggaccaaagtttccat  27114600                                         --------->ALFIN1                                       <---------O2                                       ======================bZIP_DOF                                       <---------ANAC58                                       <---------TGA1a                                       <---------ANAC58           --------->LBD16             --------->O2         <---------LBD16               <---------ANAC46       --------->ARR14(2)              --------->TGA1a       <---------ARR14(2)              <---------bZIP60(2)      <---------HSFB2a(1)            <---------TGA2(2)      <---------ZAT2                ----------->HVH21      --------->ZAT2              --------->At4g35610  --------->LBD16       <---------LBD16      --------->HSFC1(2)          <---------At4g35610 --------->LBD16      <---------ETT(2)      --------->At4g35610     ===================MYC_MYB --------->ALFIN1  <---------WRKY12      <---------HSFC1(2)      ------->GAMYB       <----------DOF2          <---------DEAR3(1)      --------->HSFB2a(1)    --------->ANAC46 --------->RAP2.3(1)          --------->DEAR3(1) --------->HSFB2a(2)       --------->MYB52(1) <------NtERF2                --------->ETT(2) ------>ZmHOX2a(1)        <---------WRKY12    --------->ATERF1(1)          ----------->HVH21 --------->LBD16        --------->ARR11(3)   <---------At4g35610         <-----------HVH21 <---------HSFB2a(2)    <---------ARR11(3)  --------->TCP16(1)        <---------ANAC58 ===============================HOX2a_HOX2a --------->TCP20           <---------ANAC58 ---------LBD16   ==============HOX2a_HOX2a <---------ARR14(2)  --------->SPL7 ----->ARR14(2)   <------ZmHOX2a(1) ----------->TGA1 <---------LBD16 <---------ZAT18 ------ARR14(2)--------->HSFB2a(2)<---------ZAT2<---------ATERF1(1)  --------->ABI4(2) -----CCA1(2)--------->WRKY18(1)  --------->ZAT2--------->At4g35610 --------->ALFIN1  --------->DOF5.7(2) --GT1<---------At4g35610<------ZmHOX2a(2)  --------->ARR14(2) ------>ZmHOX2a(1)    <---------MYB46(3) --------->AGL1<---------HSFB2a(2)----------->bZIP910(2)<---------MYB52(1)<------NtERF2 <---------DOF5.7(2)   atcctggaagctccggtctaggagtagatcaacggaagctgacgtggagccgcttcccggtgttcctacggtgcgcgtcgacggagtcgttaacgagttt  27114700                <------NtERF2               --------->LBD16              <---------ANAC46              <---------DEAR3(1)                           --------->ALFIN1             --------->ATERF1(1)                         <---------ANAC58             <---------LBD16                             <---------TGA1a             ------>NtERF2                               <---------ANAC58             <---------At4g35610                         --------->O2             <------NtERF2                               --------->TGA1a            <---------RAP2.3(1)                          <---------ANAC55(2)           <---------RAP2.6(2)                 <---------LBD16                               <-------           <---------RAP2.3(2)                <---------ALFIN1                              <------ZmHOX2a(2)           <---------RRTF1(2)                <---------REM1(2) <------ZmHOX2a(1)           --------->ARR11(3)           <---------RRTF1(3)              <---------WRKY38(1) ====================================HOX2a_HOX2a           <---------DEAR3(1)   --------->ARR14(2)       <---------O2                    ----------->ARR10           <---------RAP2.3(3)  --------->ARR11(3)       <---------ANAC46            <------ZmHOX2a(1)          <---------LBD16       --------->GLK1(2)     ----------->HVH21              ==============HOX2a_HOX2a         <-----------RAV1(1)    <---------ARR14(2)  --------->ALFIN1          ----------->HVH21 <----   gactcagaataatgcggcggagatagagttgaagtatctggtgagtcaacacgggtgggacgtgaggagattgaatagagacgacgaggatgagatcagg  27114800                             --------->ANAC46                             <---------ALFIN1                       <----------DOF2                                            <---------AHL20(2)                     <---------HSFC1(2)                  <-----------GT1 <---------TOE1(3) ----RAV1(2)         --------->HSFC1(2)           <---------YAB1         <---------TOE2(3) --ZmHOX2a(1)        --------->HSFB2a(1)   <----------DOF2            <-----------GT1  <-----------GT1   agagtgtctcttgttcaagccgaagctttccacatccctcttgctctttttgatgattttttcttcatgttttttcaggtttgtttatttttcattctca  27114900                                                    --------->ANAC55(2)                                                    ----------->GT1                                                    <---------ANAC55(2)                                        <---------GLK1(2)                                        --------->ARR11(3)                                        <---------ARR14(3)                                        --------->ARR14(3)                                        <---------ARR11(3)                          <----------DOF2                                        <---------ARR14(2)                 --------->YAB1                            <---------TOE2(3)--------->YAB1          --------->GLK1(2) <---------YAB1  <---------YAB1 ------->TEIL<---------YAB1       <------NtERF2<---------ALFIN1-------   tatatgatttacattgaagattattgttttgatgtatatgaagattttgataatatgtaatacaggcagaggttctatcagcacttctttacaaactaaa  27115000  Previous    Next  AGI:  At1g72020.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK92617.1) Range:  from: 27112953    to: 27114093    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g72030.1    Description:  GCN5-related N-acetyltransferase (GNAT) family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN78264.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16439.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182) Range:  from: 27114527    to: 27115594    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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