Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ZAT6                                                         --------->MYB46(3)                                                        ------>MYB46(1)                                    <----------DOF2     ------>MYB83                           >>>>>>>>>ARR1               ----------->RAV1(1)                           >>>>>>>>>ARR2              --------->AtMYB61                          --------->ATHB12            ------->GAMYB                     <---------DOF5.7(2)                         <---------YAB1              <---------MYB55(2)               --------->DOF5.7(2)        ----------->GT1--------->CCA1(2)             <---------MYB52(2)              <----------DOF2- ------>AHL20(2)      <---------ARR11(3)             --------->MYB46(3)         ------>ZmHOX2a(1)   < -------AHL20(2)      <---------ARR14(2)            --------->ANAC46      <---------ARR11(3)        < ---AHL20(2)          --------->ARR14(2)            --------->ANAC58      --------->ARR11(3)    <---- -->AHL20(2)          --------->ARR11(1)            --------->ANAC58     --------->CCA1(1)      ----- >TOE2(3)           ----------->ARR10             --------->MYB46(3)     --------->RVE1(1)--------->TOE2(3)   ttaatccctctcgtaaaataagtagatatgattgtagtcttttcaagtatgaacaaccaacaaatctcacactaaatatctccttcgcgttaacttaaac  27110800                                                                                --------->ARR11(3)        --------->ANAC55(2)                                              <---------ANAC55(2)        <---------ANAC55(2)                                              --------->ANAC55(2)        --------->ANAC46                                                 <------MYB46(1)    <-----------HVH21                                                    <------MYB83 <-------GAMYB   --------->ANAC46                                                <---------AHL20(2) --------->At5g28300   --------->bZIP60(2)                                          ----------->GT1<---------ICU4 -------->ZAT14                                             ---------->DOF2    --------->YAB1 ---------ZAT14                                            --------->AHL20(2) <---------YAB1 ---------ZAT18                  <---------TOE2(3)         <---------AHL20(2) --------->ICU4 -----------AtSPL8  --------->YAB1    ---------->DOF2--------->TOE2(3)  --------->MYB59  ---------->DOF2 ---->ZAT6     <----------DOF2   <---------TOE1(3)  --------->ANAC46    --------->MYB46(2)   agtacacatcacgtagtctttatcaaaacactcttaaggttaaagaaataatacacctaaattaaagagttaattaggtgatgatcacggttaaagaaac  27110900                                           <---------AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                                   <---------AHL20(2)                                   --------->AHL20(2)                                ------>MYB46(1)                                ------>MYB83                             --------->ANAC55(2)                  --------->bZIP60(1)   --------->ARR14(2)                           <-----------GT1<---------YAB1        <-----------GT1         <---------GLK1(2)              ----------->GT1--------->ANAC46            <-------TEIL             <------ZmHOX2a(1)<-             <---------TOE2(3)<---------MYB46(2)   ---------->DOF2<---------bZIP60(1)   <---------ARR14(2)             <---------TOE1(3)<---------MYB59  <---------AHL20(2) --------->TGA2(1)   ----------->ARR10    ----------->GT1  --------->AHL20(2)  <---------AHL20(2)  <---------ICU4 ------>ZmHOX2a(2)   <----   ----------->GT1   <---------AHL20(2)<---------YAB1<---------TOE2(3)      =============HOX2a_HOX2a-   ttagatgggaaaatcaaggttaaaaaaattcacctaattttatttttattttataaaggttcttaattacatcactgatctataggattagatactctaa  27111000                                --------->AHL20(2)                            <---------AHL20(2)                           --------->AHL20(1)                                       --------->ICU4                           <---------AHL20(1)                                       <---------YAB1                        --------->YAB1                                            <---------ICU4                        --------->AHL20(2)                                        --------->YAB1                        <---------AHL20(2)             <---------ANAC58 --------->DAG2                    <---------AHL20(1)        --------->LBD16 <---------ICU4     --------->ICU4   <-------TEIL     --------->AHL20(2)    <---------ARR14(2)  <--------HAHB4     <---------ATHB12 --------KAN4(2)    --------->AHL20(1)    --------->ARR14(2) --------->ICU4   --------->ICU4 -----TOE2(3)   <---------YAB1  <---------AHL20(2)     <---------ANAC58---------->DOF2              < -------->KAN4(1)   <---------AHL20(2)   <---------GLK1(1) --------->YAB1----------->GT1 <---------AHL20(2)   gaatgttcatgttccattctaattaattatatatttaaaaaacaaatccgaaaattagcttgcataattatccaaaagtaacaatgatgatttttttttt  27111100                        <---------ICU4                     <-----------GT1              <---------AHL20(2)             <---------AHL20(2)       --------->AHL20(2)                <---------ZAT6          <----             --------->AHL20(2) --------->ANAC58            ---------->DOF2              ------------            --------->YAB1    ---------->DOF2             --------->ANAC58  --------->ANAC58  ------- -----------GT1   --------->YAB1--------->ANAC58          --------->ANAC58  --------->ANAC58 <-------   tttaactgtgtcaattttaattttaaccatggcaaagcaaaaaaatgaagggttttcgacaagaaagaagaacagtgtaagaaacaaataagtcaataaa  27111200                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                                    --------->YAB1               -------->ATHB1                                             --------->ANAC58                    <---------ICU4                                             --------->ANAC58                    --------->YAB1   <------------CBF                          --------->ANAC46                   <---------ATHB12 -----TOE2(3)                              --------->YAB1                     --------->WOX13(1) >CBF                                     <---------ATHB12           <-----------GT1 --->DOF2                    *TSS       --------->WOX13(1)          <-----------GT1 --ATHB12      --------->GLK1(2)     ------>ZmHOX2a(1)<---------CCA1(2)  ------>ZmHOX2a(1)   ggttgaattgaatagagaatttagatggatagtttcttcctgcaatcacaccattcatatccacttgtttttatccttctcaatcattctctcttctctc  27111300                                            ------>ZmHOX2a(1)                                        ==============HOX2a_HOX2a                                        ------>ZmHOX2a(2)                                       --------->GLK1(1)                                       <------ZmHOX2a(2)                                       ===============HOX2a_HOX2a                                       <---------GLK1(1)                                      --------->ARR11(3)                                      <---------AGP1                                      --------->ARR14(2)                                      <---------ARR14(2)                                      <---------ARR11(3)                                     <---------CCA1(2)                                    ----------->ARR10                                <---------ZAT2             <---------DAG2                          <-                               --------->ANAC58            <----------DOF2   <----------DOF2       <-      --------->ZAT14          --------->ANAC58------>ZmHOX2a(1)    <----------DOF2        <---------ATHB12   tccctctctgttctcaaactccattttagtagcaagcttagatctcctccttccacagtcactttctcttctttctctgcttttgtttcttcaatcgatt  27111400                                                                                              -------                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC55(2)           --------->LBD16                                                                <---------LBD16           <---------LBD16                                                               <-----------GT1      <---------GLK1(1)                                                           <---------ARR11(1)      --------->GLK1(1)                                                           --------->ARR11(3)     --------->ARR14(2)                                                           <---------ARR11(3)     <---------GLK1(2)              --------->ANAC58                             <---------CCA1(2) --------ANAC58  --------->AHL20(2) --------->ANAC58                           --------->YAB1 <------ --------ANAC58<---------GLK1(2)<-----------HVH21                     --------->YAB1 <----------DOF2   tgcttcagatttccccagattatatagaattcgatgtcaagacacagaattcacatgggttttgtctaaaaatcataaaaatcatatctttttacggatt  27111500                                <------NtERF2                               ------>NtERF2                               <---------ATERF1(1)                              <---------DEAR3(1)                              ----------->HVH21                              --------->DEAR3(1)                             <------NtERF2                            <---------ATERF1(1)                                                     <                           <---------DEAR3(1)                                 <---------ANAC46      -                          --------->ATERF1(1)                           ========================HOX2a_HOX2a                         --------->LBD16                                ------>ZmHOX2a(2)           -                        <---------ANAC58                            <------NtERF2                <---                        <---------ANAC58                           --------->LBD16             <-----                        <---------ANAC46                           ------>NtERF2               <-----                    <-------GAMYB                                 <---------LBD16        ------>ZmHOX2a(1)                 ------>ZmHOX2a(1)                --------->LBD16 --------->LBD16  <-----------GT1  -        --------->YAB1 <---------LBD16  <---------At4g35610 --------->AtMYB61 <---------ANAC58 <-----      ------->TEIL <-----------RAV1(1)  --------->At4g35610--------->MYB46(3) <---------ANAC58------- -->ARR14(2)<---------GLK1(1)--------->RAP2.3(1)  ----------->GT1<---------LBD16<---------MYB52(1)  - ---ARR14(2)--------->GLK1(1)--------->ATERF1(1)<---------LBD16--------->DEAR3(1) <---------CCA1(2)<-   tgaagatgaatcagaattcctctgttgcggaggcgacgcttcagcttaattccggtgaaaaaccatcgccgggatcgattccgtttatctcctctggtca  27111600          --------->ANAC58          --------->ANAC58      --------->YAB1 ---------ANAC55(2)                                 <---------ZAT14                              ---- -------->ANAC46                                --------->ALFIN1           <---------ANAC46     <---- -------->ANAC58                               <---------MYB52(1)        ------>NtERF2         <----- ------REM1(2)                <---------HSFB2a(2)   <---------ZAT18      --------->LBD16       <----- ----WRKY38(1)              <---------------------WRI1                  --------->ANAC46       ------ ----WRKY45         --------->DEAR3(1)      <-----------RAV1(2)      <---------ARR14(2)   XXXXXXXXXXX -------->ANAC58    ----------->HVH21    --------->ZAT2        ----------->GT1           <---------MYB52(2) ----WRKY12        --------->At4g35610  --------->ANAC58     --------->LBD16--------->LBD16---------- -->WRKY18(1)   --------->ZAT14   --------->ANAC58  --------->ZAT14  --------->ARR14(2) ------>MYB46(1) -------->ANAC55(1)<---------At4g35610  --------->ANAC58    <---------ANAC46--------->At5g28300------ --------LBD16  <---------ZAT14   --------->ANAC58  --------->ZAT18----------->ARR10    ------>MYB83   acacggaaacataagcacttcagcgacgagttcgacaagcacaagctcaggtagtgctcttgccgtagttaaatccgccgtgaaaaaaccaactaaagat  27111700  Previous    Next  AGI:  At1g72010.1    Description:  TCP family transcription factor, putative. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G35560.1); similar to Os12g0173300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066282.1); similar to TCP family transcription factor containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA96580.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 27111229    to: 27112937    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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