Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----              ------>MYB83                                                               <---------ZAT2      --------->ARR14(2)                                           <<<<<<<<<GATA-3       <---------At4g35610 <---------At5g28300            ----------->RAV1(2)                <<<<<<<<<GATA-1       ----------->RAV1(2) -----------GT1                 --------->At4g35610                <<<<<<<<<GATA-4       --------->At4g35610 --------->HVH21    --------->ANAC58                          <---------MYB52(1) --------->At5g28300 ---------HVH21     --------->ANAC58                     <-----------GT1   <----------DOF2      ----- ----->ANAC46 ------>MYB46(1) <---------ALFIN1 <------ZmHOX2a(2)   <<<<<<<<<GATA-2       --------->ZAT2 -TEIL--------->REM1(2)     <-----------HVH21 <---------ARR11(3)  --------->ARR14(2)   <-----------RAV1(2)   tgtcaccgtatagacctagcccgagcaatgcatcacctgcaatggctggatcatcgaattatccgttgaatccactgcgttacagtgaatcagctggaac  27103500                                                          --------->AtMYB61                                                          <---------ALFIN1                                                         <---------ATHB12         --------->ANAC58                                <---------MYB55(2)         --------->ANAC58                                --------->MYB46(3)         --------->ANAC46                               ------>MYB83        --------->SPL7                                  ------>MYB46(1) -------DOF2                                            -------->P ---->HSFC1(2)                                        <---------MYB111(1) -----HSFC1(2)                     <-------GAMYB      --------->AtMYB61         <---------TOE2(3) -----HSFB2a(1)              <---------HSFB2a(2)     --------->MYB46(3) <-----------HVH21 ---->HSFB2a(1)              --------->HSFB2a(2)     --------->DEAR3(2)<---------At4g35610 ------------------>TaNAC69(2)    <---------ZAT6--------->ANAC46     <-----------RAV1(2)  <----------DOF2   tttctctccatacgcctctgcaaactcgcttccagactgttagaaagtctacagaaccaaccactcttggttcaggtcatataagattatttcttttgca  27103600                                          --------->ALFIN1                                          <---------ANAC58                                          <---------ANAC46                                        <---------ANAC46                                        <---------ANAC58                                        <---------ANAC58                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                     <---------AtMYB61                                     --------->ALFIN1                                    <---------ZAT14                                   --------->ALFIN1                                 <---------ANAC46                                 <---------ANAC58                                --------->At4g35610                   ------->TEIL  <---------ANAC58                          <---------MYB46(3)           --------->ANAC58  <-------GAMYB<---------ANAC58                <---------AtMYB61      ----           --------->ANAC58<---------ANAC58                     --------->YAB1   <---------At4g35610           --------->ANAC46<---------ANAC58                  <----------DOF2<-------GAMYB        <---      <-----------GT1      <---------ANAC46          <-----------GT1   <----------DOF2  --------->YAB1   tttgagttttactacgaaacgtacttctggcgtttgtgtgtggtgtgtgtgtgtgtaacgatgcttttatagtcttttggttgagatgaaacatcatcgg  27103700                                                                                            <--------                                                                                            <--------                                                                                  --------->ANAC58                                                                                  --------->TGA1a                                                                                  --------->O2                                                                                  <---------TGA1a                                                                                  --------->ANAC58            --------->ARR11(3)                                                    --------->ANAC55(2)            <---------ARR11(3)                                                    <---------O2           <---------RVE1(1)                                                      --------->ANAC46 <- <---------TOE2(3)                                                                --------->ANAC55(1) --------->MYB59                                <----------DOF2                   =================bZIP_DOF <---------TOE1(3) --------->ZAT6               ============================================bZIP_DOF< ----->ARR14(2)  <-----------GT1            <---------ARR14(2)                <-----------GT1   <---- ------ARR14(2) <-----------GT1             --------->ARR14(2)             ------->TEIL <----------DOF2   atttaggttagagagattttaacacttcgacaattacacaaactcggttcctttgtacaaagaaatatgagcttatgtatatacacgtctctttccttgt  27103800                                                    ----------->GT1                                            <<<<<<<<<ARR1 -ANAC58                         <---------AtLEC2--------->STY1(2)                         --------->TOE2(3) -ANAC58                     <---------MYB52(1)------>ZmHOX2a(1)                     ----------->GT1 --------YAB1           --------->ARR14(2)  <<<<<<<<<ARR2                      <---------TOE2(3) -----------GT1     --------->ZAT6          <------ZmHOX2a(2)           <---------MYB59  >>>>>>>>>MYB98 -----YAB1       <---------CCA1(2)     <-----------GT1          <-----------RAV1(2)<-------TEIL   ---   tattactatctgatcactcttatctctatccgtttgcattgatacgatcctatctagtaaataggcccagtaggcctaattaaggtccagtaacataaac  27103900                                                                          ======================HOX2a_HOX2a                                                                         <------ZmHOX2a(2)                                                                         <---------GLK1(1)                                                                         --------->GLK1(1)                                                                        <---------ARR14(3)                                                                        <-----------ARR10                                                                        <---------ARR11(3)                                                                        --------->ARR14(3)                                                                        <---------ARR14(2)                                                                       <------ZmHOX2a(1)                                                                     <---------TOE2(3)   <------ZmHOX2a(1)                                                                 <-------GAMYB         <---------TOE1(3)                                                                <---------ANAC46       <---------TOE2(3)                                                                <---------MYB46(3) <----------DOF2                                                               <------NtERF2     <---------MYB46(3)                                                              ------>NtERF2 <---------LBD16                                                             <---------DEAR3(1)  --------->MYB55(2)                                                             --------->DEAR3(1) <---------AtMYB61                                                             <---------ANAC46  <---------MYB52(1)                                                           <---------ATERF1(1)--------->LBD16      --                                              *TSS         --------->LBD16------>ZmHOX2a(2)        --                                       --------->WRKY12  <---------LBD16--------->ARR11(3)         --                                       --------->WRKY38(1) ------>NtERF2--------->ARR14(2)       ----         --------->DAG2               <---------MYB52(1)------>ZmHOX2a(1)=======================HOX2a_HOX2a        ---------->DOF2              <-------GAMYB      ========================HOX2a_HOX2a     <---- ------>ATHB12                   <---------ALFIN1       =========================HOX2a_HOX2a  -------   tgatttgggctaaagtgaatgaagaaaactccatcccaccgttggccggtctattctcctccggcgtcgttgaggatctccggtggtttaaggaatcaat  27104000                                            --------->YAB1                                 <---------At4g35610          <---------ATHB12       <------NtERF2    --------->ANAC58             --------->At4g35610    --------->AtLEC2            --------->RAP2.6(2)    --------->ANAC58           <---------RAP2.6(2)   <-----------GT1          --------->ANAC58 ------->ANAC46         ------->GAMYB      --------->ICU4                     --------->ANAC58 ------->ANAC58        --------->ANAC58    <---------ATHB12             <-----------HVH21 ------->ANAC58        --------->ANAC58   <---------TOE2(3)            <----------DOF2             -- ----->YAB1            --------->ANAC46  --------->YAB1          ------>ZmHOX2a(2)              <---- -----ATHB12      --------->TOE2(3)      <---------ICU4        <---------ARR11(3)        --------->GLK1(1) -->WOX13(1)      --------->TOE1(3)<----------DOF2 <----------DOF2 ------>ZmHOX2a(1)     <---------GLK1(1)   cacaccatgccaatgagatacctcaacgcaatggccgctctactaatgatgttctttactctcttgatcctctctttcacaggcattttagaattcccat  27104100                                 <---------ARR14(2)                                 --------->ARR14(2)                               --------->LBD16                              --------->ANAC46                <-------TEIL          <---------ANAC58   --------->REM1(1)          --------->ANAC58                ------>ZmHOX2a(2)     <---------ANAC46 <----------DOF2              --------->ANAC58               <------ZmHOX2a(2)      <---------ANAC58 ------->At4g35610            --------->ANAC55(1)           <---------ARR14(2)     <---------At4g35610 -----At4g35610              <---------LBD16                --------->ARR14(2)   <---------CCA1(2)   ctgcttcaacttcgatggagcattcaatagacccggaaccgaaattgtctgattcaacatcggatccattcagtgatgttcttgtagcttataaaaaatg  27104200                                                                                                -----                                                                                                <----           <-------GAMYB                                                                     <-------           <---------ANAC58                                                           <-------GAMYB           <---------ANAC58                                                           <---------ANAC58           <---------ANAC46                    <----------DOF2                        <---------ANAC58          <------MYB83                       <---------------AGL15                   <------MYB83----          <------MYB46(1)                   ----------------->AGL1                   <------MYB46(1)        --------->ALFIN1        --------->GLK1(2)            --------->MYB52(2)     --------->MYB59 <----------DOF2      <----------DOF2---------->DOF2      --------->TOE2(3)      --------->GLK1(2) xxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->YAB1         <---------ZAT6 <----------DOF2 <---------MYB46(3)   ggactttgaagtgggttgtgctcggtttagggagaatcataaagatgcgattttgggtaatgttagttcgggttctttacaagaatttggttgtggtaag  27104300                                               --------->LBD16                                  <---------ZAT18                           ---------->DOF2    <---------HSFB2a(2)                       <---------ANAC58 ---->At4g35610   --------->ARR11(3)          <---------ANAC46                          <---------ANAC46 -----At4g35610 <---------TOE1(3) --------->ZAT18                               <---------ANAC46 ---- -P <---------REM1(1)  <---------MYB46(3)    <---------LBD16                <-------GAMYB        <--- ----->TOE1(3)  <---------TOE2(3)--------->ALFIN1       ----------->GT1   ---------->ID1<---------ANAC58   cttaagatgaagcatgttaaggtattggttaaagggtggacttggattccggataatttggaaaatttgtattcttgtcgttgtgggatgacttgtttgt  27104400  Previous    Next  AGI:  At1g71980.1    Description:  protease-associated zinc finger (C3HC4-type RING finger) family protein. similar to peptidase/ protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G09560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15460.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 27101565    to: 27103801    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g71990.1    Description:  FUT13 (fucosyltransferase 13); fucosyltransferase/ transferase, transferring glycosyl groups. Identical to Alpha- (FUT13) [Arabidopsis Thaliana] (GB:Q9C8W3;GB:Q8RYC1); similar to FUT11 (Fucosyltransferase 11), 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase/ fucosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G19280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67769.1); contains InterPro domain Alpha-(1, 3)-fucosyltransferase/alpha-(1, 4)-fucosyltransferase, plant (InterPro:IPR017177); contains InterPro domain Glycosyl transferase, family 10; (InterPro:IPR001503) Range:  from: 27103946    to: 27105924    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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