Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->SPL7                                                                           ----------->HVH21                             ----------->HVH21                             <---------SPL7                             --------->WRKY38(1)                          --------->TOE2(1)                    <---------YAB1                                        --------->TOE1(1)                  <---------bZIP60(1)                           ------>ZmHOX2a(2)                  <---------TGA2(1) --------->At4g35610       --------->ARR11(3)             ----------->GT1<-----------HVH21                 <---------ARR11(3)            ------>NtERF2   <---------MYB52(1)                <---------ARR14(2)           <---------ANAC46--------->LBD16                --------->LBD16<---------At4g35610          <---------LBD16<---------LBD16               ------>ZmHOX2a(1) --------->At4g35610 ---->MYB46(3)    --------->GLK1(1) <---------At4g35610================HOX2a_HOX2a --->RAP2.6(3)    --------->bZIP60(1)      --------->ARR14(2) --------->ARR14(2)                <---- -->MYB52(1)--------->LBD16<---------At4g35610    =====================HOX2a_HOX2a              ----- -->ARR14(2)<---------MYB46(3)<---------ATERF1(1) ------>ZmHOX2a(1) ---------->ID1            -------   ggccataaactcgccgggtgatatcattccggtgactccgcttagtatcgtcctctcctccgtcgatcttgtctcatcggacggtttttgttttaatcct  27091500                                         ------>ZmHOX2a(2)                                       <---------AGP1                                       <---------ARR11(3)                                       <---------ARR14(2)                                       --------->ARR11(3)                               --------->ANAC58                               --------->ANAC58                  ------->GAMYB              ---------     <---------ANAC58        <---------ICU4       --------->At5g28300                  --------->AHL20(2)     <---------ANAC58   <---------MYB52(1)       ----------->GT1<---------MYB52(2)     --------->YAB1 -----YAB1            ----------->GT1  ------->TEIL             --------->MYB46(3)    <---------ATHB12 ->ZmHOX2a(1)       --------->GLK1(2)  --------->ARR14(2) --------->ANAC46   --------->ANAC58 -->YAB1           <---------GLK1(2)  <---------CCA1(2) --------->ANAC46     --------->ANAC58   aatagtttcttgatattacaagaatcgttactcatgccatggatcttgactcggtaacacacatcaacgaactaatatcaagaaaccaataaaaaaacag  27091600                                                                            <---------ARR11(3)                                                                            --------->GLK1(2)                                                                            --------->ARR14(2)                                                                       ----------->GT1                                                                 <---------AHL20(2)        ----------                                                                <---------AHL20(2)         <---------ANAC55(2)                                                        --------->TOE1(2)   <---------ARR14(2)                                       ----------->GT1  --------->ARR14(2)  <-----------ARR10                                      <---------AtMYB61 <---------ARR14(2)  --------->ARR11(3) >MYB52(1)            <---------WRKY38(1)  --------->AHL20(2)   --------->AHL20(2)         <---------ANAC46   agtcaagaacagagtcaaaactagtcaacaatagattagtgtggtttaaattttagaaaatacgaattaaatattgaaaatctgagttttgttaagtgaa  27091700                                                       ======================HOX2a_HOX2a                                                       ------>ZmHOX2a(2)                                                      =======================HOX2a_HOX2a                                                      <------ZmHOX2a(2)                                                     <-----------ARR10                                                     --------->ARR14(2)                                      <---------------------WRI1                                 --------->YAB1      <---------ARR14(2)                                 -------->HAHB4      --------->ARR14(3)                                 <---------ICU4      --------->GLK1(2)       <---------ARR14(2)                                --------->ICU4       <---------AGP1          --------->ARR14(2)                           --------->YAB1            <---------ARR14(3)      ------->TEIL               <----------ARF1--------->YAB1         --------->ARR11(3)      --------->GLK1(2)          <---------WOX13(1) <---------YAB1          <---------ARR11(3) --------->At4g35610        <---------MYB46(3)<---------YAB1            <------ZmHOX2a(1) <------ZmHOX2a(1) <-------TEIL ->GT1  --------->ATHB12  ----------->GT1       <---------O2    --------->CCA1(2)      <---------MYB52(1)   accttgagggtgattgggaaacaagaagatgataataatgagcgaggctcacgaggatcttgagagagacgaggagatgaatctggaccgttcatttgat  27091800                ----------->HVH21              <---------At4g35610              --------->At4g35610           ---------->DOF2        <------NtERF2       ------>NtERF2       <-----------HVH21      --------->DEAR3(1)      --------->RAP2.6(2)      --------->RAP2.3(3)      --------->RAP2.3(2)     --------->RAP2.3(1)                               <---------AHL20(2)    ------->GAMYB                              ----------->GT1   --------->DEAR3(1)          <----------DOF2--------->ANAC58   --------->ANAC46      <---------ZAT6       --------->ANAC58----------->GT1           ----------->GT1   tttcaacgccgtcaaaagctgacattagtgttcctttgtaaaattcagacggaaaatttaaacggagttaaaaaaaacacagagagagagaggtgaaaat  27091900                                                                       --------->bZIP60(2)                                                                       --------->TGA1a                                                                       <---------bZIP60(1)                                                                       <---------ANAC55(2)                                                                       --------->bZIP60(1)                                                                       <---------O2                                                                       --------->ANAC46                                                                       --------->O2                                                                       --------->ANAC55(2)                                                                       <---------TGA1a                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                      <-----------STF1                                                                    <------NtERF2                                                                  --------->PCF2                                                                 <---------PCF2                                                                <---------ANAC58                                                                <---------ANAC58                                                                <------MYB83                                                                <------MYB46(1)                                                               <---------MYB46(3)                                                        --------->ANAC58<-----------TGA1          *TSS                 <-----------TBP          --------->ANAC58<-----------HVH21    --------->At4g35610  <---------At4g35610          ---------->DOF2<---------ALFIN1     <----------    <---------At4g35610  --------->At4g35610          ===========================bZIP_DOF--------->ATHB12 ---------->DOF2<------------CBF--------->ICU4--------->ALFIN1--------->ALFIN1         <-----------HVH21   ggagaaagctgaagaagagattgtgagagctgtatttatggagaagaagtggaacgtgaagcaagtgggtgccacgtcattagattactggtcattgaga  27092000               ----------->GT1      ------->MYC3                   --------->At4g35610      ------->MYC2                   <---------At4g35610      -------->ABF1               --------->ATERF1(1)      <-------MYC3               ------>NtERF2      <-------MYC4               <---------ATERF1(1)      <-------PIF5              <---------ETT(2)      ------->PIF5              --------->ETT(2)      ------->MYC4             <------NtERF2     ===============================================bZIP_DOF     --------->ANAC55(2)      <---------ATERF1(1)     <---------ANAC55(2)   --------->ZAT2     --------->ANAC46      --------->At4g35610     <---------TGA1a       <---------At4g35610         ---------->DOF2              <---------At4g35610     <---------O2          <---------ZAT2           --------->AHL20(2)          <-----------GT1     --------->TGA1a       ----------->RAV1(2)  --------->AHL20(2)          <----------DOF2     --------->O2         ------>NtERF2  ---------->DOF2--------->DAG2  ---------->ID1 --CBF<-------MYC2       <-----------RAV1(2)----------->GT1 <------------------------ANAC81   <------   aaataacacgtggcaaaacgtataatgccagctggcgactgctgaaaggaataaataaaaagtgttttagttttgtttcttttttctgcttagccacttt  27092100                                                                           <----------DOF2                                                                         --------------->AGL15                           <-----------GT1                               <---------------AGL15                     <----------DOF2   <---------YAB1                   ----------------->AGL2                    <---------DAG2   <---------At4g35610             <----------DOF2                 ------>NtERF2    <<<<<<<<<TBF1                  <----------DOF2       <----------DOF2    <------------------------ANAC81  ---------->TaMYB80                  <----- ----DOF2    <-----------GT1   <<<<<<<<<TBF1<---------AHL20(2)<-----------GT1            --------->WOX13(1)   aaaattcttctttttttgccagccttttttttcttcttcttctgattttttttttttttcgaatatactttctttctctttacagaaatttcaattagtg  27092200                                                                                             <-------                                                                                             --------                                                                 <---------AHL20(2)        --------->YAB1                                                                --------->AHL20(1)         <---------ICU4                                                                <---------AHL20(1)        <---------YAB1                                      <---------AHL20(2)        <---------ARR11(3)        --------->ICU4                                     <---------YAB1             --------->ARR11(3)      <---------ICU4                             <---------At4g35610         <------ZmHOX2a(1)              --------->YAB1                             ----------->RAV1(2)   ---------->DOF2                     <---------ATHB12                        --------->GLK1(2) --------->AHL20(2)   --------->CCA1(2)     --------->WOX13(1)       <---------YAB1   <---------ARR14(2)<---------AHL20(1)  <---------ARR11(3)     --------->YAB1 ----ZAT6               --------->ARR14(2)<---------AHL20(2)  --------->ARR11(3)   <---------YAB1   ttttccactctaattgtcaaattgagaatccacctgatttttattttattttgaaaagaggaaagatatatttgtaagactgactattaatcatcatgaa  27092300                                               <---------------AGL15                    <---------AHL20(2)                                               --------------->AGL15                   --------->AHL20(2)                                               <----------DOF2              <-----------GT1        --                                            ---------->ID1                 --------->ICU4          <-                                         <----------DOF2                 <---------ICU4<---------AHL20(1)                                         ------>ZmHOX2a(1)            ----------->GT1  <---------AHL20(2) --YAB1                               ---------->ID1                --------->ICU4  <---------ICU4--- --->GT1   <----------DOF2     <------------------------ANAC81 ----------->GT1     --------->ICU4 <--   aaatgtgcaaaaactttattttgtgtttgtatgtgtttatgtccttttcctttttttagttaacaatgtaattagtaattaccacataattaattttgaa  27092400  Previous    Next  AGI:  At1g71960.1    Description:  ABC transporter family protein. Identical to White-brown complex homolog protein 26 (WBC26) [Arabidopsis Thaliana] (GB:Q84TH5;GB:Q949Y4;GB:Q9C8W6); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT1G31770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43693.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 27086056    to: 27091910    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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