Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->PCF2                                                                                          --------->TCP16(1)                                                                                        <------MYB46(1)                                                                                        <------MYB83                                                                                        <---------MYB46(3)                                                                                       --------->ALFIN1                                                                                       <---------AtMYB61                                                                                     <---------ANAC58                                                                                     <---------ANAC46        <---------AHL20(2)                                                           <------MYB46(1)     <---------AHL20(1)                                                              <------MYB83----     --------->AHL20(1)                                                              <---------ANAC58  ------>MYB83                                                             ------>ZmHOX2a(1)    -----  ------>MYB46(1)                                                     <---------At4g35610 --------->PCF5 ---------MYB59                                                   <-----------GT1   <---------MYB46(3) -------->TOE2(3)                                              --------->YAB1       --------->MYB55(2) ->TOE2(3)                              <----------DOF2   --------->AHL20(2)    <-----------RAV1(1) ->TOE1(3) <-----------GT1<----------DOF2             <----------DOF2 --------->At4g35610<---------TCP16(2)   aacctaatatttttttctggtccaaaaactttctctatcaagcttttgcattttttcttttaaaatagtaacagctcctccattgttgggtggtcccata  27079400                                                       --------->CCA1(2)                                                       <------ZmHOX2a(2)                                                      --------->ARR11(3)                            <---------AHL20(2)        --------->AGP1                              <--                      ----------->RAV1(1)             <---------ARR14(2)                    <--------                   --------->ANAC46                   --------->ARR14(2)            <---------ANAC55(1)                 --------->At4g35610                  <---------ARR11(3)            <---------ANAC46            ------->GAMYB   <---------YAB1        ---------->DOF2                  <-------TEIL <----            --------->YAB1 --------->AHL20(2)  --------->TOE2(3)           --------->ARR11(3)   -----      --------->YAB1--------->At4g35610        --------->TOE1(3)           <---------ARR11(3) -------  <-------TEIL <---------ICU4            --------->TOE2(3)                --------->CCA1(1) --------- ----->AHL20(2)--------->YAB1            --------->TOE1(3)            --------->AHL20(2) ------->TEIL ---->YAB1 --------->MYB46(3)--------->YAB1  <---------TOE1(3)<----------DOF2  ----------->GT1<------   aaaatacatcataaccatcatcagcaacatataatagcgatagccttaagcttaaagatccaagcttttggatataatatctagttacatgtatatatat  27079500                                                                         ------>MYB46(1)                                               <---------ANAC46          ------>MYB83                                               <---------ANAC58          ----------->RAV1(1)                                               <---------ANAC58         --------->ANAC46                                            <---------PCF2             <---------MYB59                                            <---------SPL7             --------->MYB46(3) -------AHL20(2)                           <---------ANAC58      --------->YAB1 -AHL20(2)                               --------->ALFIN1        <--------HAHB4 -----AHL20(2)                       <---------ANAC46            <---------ICU4               ------- ---->AHL20(2)                       <---------ANAC58   --------->bZIP60(1)                  <------- -->AHL20(2)                     <---------AHL20(2)     <---------bZIP60(1)        <----------DOF2 >AHL20(2)                 ----------->GT1 <---------ANAC58     <---------YAB1<-------TEIL   <------- ---AHL20(2)    <---------AHL20(2)   <---------ANAC58 <-----------GT1 --------->ANAC46--------->HSFB2a(2)   atatatgtgtttgtatatttataggtatatagtatattatcgtgtgcgtccgtgtgtaacatcactatcattacccaacatacagcttttggaatttcat  27079600                                              <---------ANAC58                                              <---------ANAC58                                 <---------AHL20(2)                                --------->AHL20(2)                                               <---                                <---------AHL20(2)                                               <---                             --------->YAB1  --------->HSFC1(2)                                  <---     ---------->DOF2        <---------YAB1   <---------HSFC1(2)                            --------->ALFIN1 -->ATHB12                --------->YAB1    ------->TEIL    <---------AtMYB61           <---------TOE2(3) --AHL20(2)          <----------DOF2   --------->MYB52(1) <----------DOF2               <---------TOE1(3) --YAB1          <------ZmHOX2a(2)  --------->YAB1<---------YAB1  <---------AtMYB61 <----------DOF2   tggacccaagagccattcgatccctttcttataattaaatataacgaagcttgtaataggctttggttttggtcccaaatacaaaactttaaggttgtgc  27079700         <---------TOE1(2)         <---------TOE2(3)                           <-------TEIL         <---------TOE1(3)                  <---------YAB1 <---------ANAC58                     --------->ANAC58 <---------ANAC58              ---------->DOF2      <-----------GT1 ------ANAC58               --------->HSFB2a(2) --------->AHL20(2)       <---------YAB1    --------->O2 ------ANAC46               <---------HSFB2a(2) <-----------TBP        <---------CCA1(2) <---------ALFIN1 ------ANAC58    ------------>CBF     --------->ANAC58            --------->TOE2(3)    ------>NtERF2   cttgtttgtctaaggttttcgcaatagcttccaaaaagacacgcttatgtttatatacatttcattttccttcatatcattctcttctctgccacttctc  27079800                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                               ------                                                                                     <<<<<<<<<WRKY18                                                                                   <-----------HVH21                                                                                   --------->TOE2(3)                                                     <---------ARR11(3)           --------->YAB1  <--                                                     --------->ARR11(3) <---------AHL20(1)    <------               <---------CCA1(2)          <-------TEIL<------ZmHOX2a(2) --------->AHL20(2)   <-------             <---------ICU4          <---------AHL20(2)                 --------->AHL20(1)   <------NtERF2       <---------ANAC58              --------->AHL20(2)          ----------->GT1 <---------ATHB12 ---  *TSS <---------ANAC58      <-----------GT1        <------ZmHOX2a(1)   <---------AHL20(2)  ------>NtERF2   catcttgtttcttactcatttctctaacaattttccaaattaaatacgtttataggatcatcgtggatggataatataatgcaatcgtcaatgccaccgg  27079900             <-----------HVH21             ----------->RAV1(1)         --------------->AGL15            ------->GAMYB  <----------DOF2            ----------->HVH21           ----------------->AG ------->GLK1(2)          <---------ANAC58            <------ZmHOX2a(2) ------>GLK1(1)           <---------ANAC58           --------->ARR11(3) -------GLK1(1)         --------->ARR11(3)           <---------ARR11(3) --->LBD16  --------->ANAC46            <-----------------AGL1 -------ARR14(2)        <---------ARR11(3)        <---------------------WRI1                      --- ---LBD16   <---------ETT(1)     <-------GAMYB   <------ZmHOX2a(1)                              <---- --LBD16  <---------At4g35610 <---------ANAC46--------->CCA1(2)          <----------DOF2        ----- ------>ARR14(2)    <------ZmHOX2a(1)   ----------------->AGL1 <---------ATHB12              <-------   gattccgatttcatccgacagaggaagagcttgtgggttattacctagataggaagatcaattcaatgaagagtgctttagatgtcattgtagagattga  27080000                                     --------->YAB1                                    <---------YAB1 --------->ARR14(2)    --------->ATHB12                                   <---------AHL20(2)               <---------YAB1                                   --------->AHL20(1)             --------->YAB1                                   <---------AHL20(1)            <---------YAB1                                   --------->AHL20(2)          -------->HAHB4                     ---                                  --------->AHL20(2)           --------->YAB1                    ----                                  <---------AHL20(2)           --------->ATHB12       <---------ANAC58                                  --------->YAB1   <---------ARR14(2)--------->ATHB12 <---------ANAC58 --->ZmHOX2a(2)                  --------->ICU4<-------MYC3    <---------ICU4         <---------AtLEC2 -----ARR11(3)              ----------->GT1    ------->MYC3   <---------YAB1          <---------ANAC46 ---->ARR11(3)       --------->CCA1(2)  --------->WOX13(1)    --------->ICU4      ------>ZmHOX2a(1) --WOX13(1)          --------->GLK1(1)<---------AHL20(2)    --------->YAB1 <---------WOX13(1)--------   tctctacaaaatggagccatgggatatacaaggtaattatattaatcaacgtggattttgtataatgattatcattgattaatcctttgcatggaatgac  27080100                                         <---------ANAC55(2)                                         --------->ANAC55(2)                                     --------->YAB1                                       <---------ANAC58                                     --------->AHL20(2)            <---------WOX13(1)     <---------ANAC58 ------>At5g28300                   <---------ATHB12   <---------ANAC58                   <---------ANAC46 ------->GT1                        <---------ATHB51   <---------ANAC58              <----------DOF2 --->HVH21  <---------ICU4     >>>>>>>>>MYB2     ------->TEIL    --------->ATHB12<----------DOF2   <-   agtaaattgtctagttatgacataagttttgaaaaccaataatatgtgatgaatttggcatgcgaagtgattgagagagcctactttctttgacttgtat  27080200                                                                  --------->YAB1                                                                 <---------YAB1                                                              <---------ATHB12                                                        --------->YAB1                    <---------GLK1(2)                  <---------ATHB12           --------->ALFIN1                            <<<<<<<<<ARR1                             ----           ----------->GT1                             <<<<<<<<<ARR2                           ------         <---------ANAC46                       ----------->GT1--------->YAB1        <-----------GT1    --------->MYB52(1)                         <---------------AtSPL8              --------->AHL20(2) ------TEIL<---------ZAT6   ---------->DOF2    --------------->AtSPL8     <----------DOF2----------->GT1   gttcataaacggagtgtgaaaagaatttcacaaagaaattaagagatgtatagtacaatcataaatcataatacttcttttgaaattaaaccggttgaaa  27080300  Previous    Next  AGI:  At1g71930.1    Description:  VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7); transcription factor. similar to VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1), transcription factor [Arabidopsis thaliana] (TAIR:AT2G18060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43676.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 27079802    to: 27081619    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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