Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 <---                                                                                    <---------AHL20(2)                               <---------ZAT18                                    <---------AHL20(2)    --------->ZAT6     --------------->AGL15                                    <---------YAB1   <--- <------ZmHOX2a(2)     ------>ZmHOX2a(1)                                    <----------DOF2     ----- -------->ARR11(3)     <----------DOF2<----------DOF2                  <----------DOF2          <---- ---------ARR11(3)     <---------------AGL15                           <---------DAG2    --------->MYB59 -----RAV1(2)         ----------------->AGL3               --------->DAG2   <---------DAG2----------- -->HSFB2a(2)         <-----------------AGL3              ---------->DOF2<-----------GT1 <---------TOE2(3) ---HSFB2a(2)         <-----------------AGL2       --------->ALFIN1 <-----------GT1<---------YAB1----   aagatcacactagagaaaataagtcctttttatggcacttctttttgaattagatgggggaaaagttgaattactttactttatttttatttaggtaaat  27061700   <---------ANAC55(2)   --------->ANAC55(2) --------->AHL20(2) <-----------GT1                    <---------AHL20(2)                <---------AHL20(2) ----->AHL20(1)                    <---------AHL20(1)  <---------AHL20(2) ------AHL20(1)                    <---------AHL20(2) <---------AHL20(2) ------AHL20(2)                    --------->AHL20(2) <---------AHL20(1)                       <----- ---->AHL20(2)                     --------->AHL20(1) --------->AHL20(2)        --------->AHL20(2) -----AHL20(2)                 <---------AHL20(2) --------->AHL20(2)  --------->AHL20(2)       <----- >GT1                         --------->AHL20(2)--------->TOE2(3)    <---------WOX13(1)       <------ ----->AHL20(2)    --------->AHL20(2)    ----------->GT1          <---------AHL20(2)          -------   aaattacttaatatgacttcaaaaaatagacattaaataaaatttgttaaacttaattaatttgatatttgattaattcaaattacttagaaacatttta  27061800                                                                 --------->AHL20(2)           <---------GLK1(2)                                  <-------GAMYB           --------->ARR11(1)                                <---------MYB46(3)           --------->ARR14(2)                                ----------->GT1           <---------ARR14(2)                               <-------TEIL           <---------ARR11(3)     ----------->GT1         <---------SPL7           --------->ARR11(3)    --------->DAG2        <------ZmHOX2a(1)       ---------->DOF2          ---------->DOF2     <---------ICU4          --------->TOE1(3) ----YAB1----------->ARR10    <---------AHL20(2) --------->YAB1<---------MYB52(1) ----AHL20(2)            <---------AHL20(1)   <---------------AGL15         --------->TOE2(3) ---AHL20(2)             --------->AHL20(1)   --------------->AGL15  --------->AHL20(2) -->AHL20(2)          --------->AHL20(2)     <-----------------AGL3  --------->YAB1 <---------YAB1  <   attctcatgtaaagatactgaccaaaaaatattaaaaagtatatactactaaaataaggacgtccgttaaattataaaccttaaatattcttgtaaacaa  27061900                                                      <-------PIF5                                                      <-------MYC3                                                      ------->MYC3                                                      ------->PIF5                                                      ------->MYC4                                                      <-------MYC4                                                      ------->MYC2                                                      <-------MYC2                                                     <--------ABF1                                                     --------->bZIP60(2)                                                     --------->ANAC55(2)                                                     <---------TGA1a                                                     <---------O2                                                     --------->O2                                                     <<<<<<<<<<HY5                                                     <<<<<<<<<<ABI5                                                     <<<<<<<<<<AtMYC2                                                     --------->TGA1a          --------->At4g35610                        <---------ANAC55(2)        <---------WRKY38(1)                        <------------OsbHLH66       --------->ANAC58        <---------WRKY12                      ------>MYB46(1)                  --------->ANAC58     <        <---------WRKY45                      ------>MYB83              <---------ZAT18             <       <<<<<<<<<<WRKY6     ====================================bZIP_DOF--------->AtLEC2         >>>>>       <<<<<<<<<<WRKY11    ---------->DOF2  <---------MYB59 ------>ZmHOX2a(1)  --------->ANAC46 >>>>> ---------TOE2(3) <----------ID1 <------ZmHOX2a(1) <---------ALFIN1<-----------HVH21      --------->GLK1(1)   ctaagtttagtcaactaaaaaaaacaaaacaaagaggagttaatgacctactgccacgtgtcctcacattgtcatgcactcacacaaatgagatttctaa  27062000            ----------->GT1           <---------HSFB2a(2)       <---------CCA1(2)   <-----------ARR10  <---------CCA1(2) ---------ANAC58                                                            --------->REM1(1) ---------ANAC58                               --------->AHL20(2)           --------->ANAC46      <-- >>>>MYB1  --------->HSFB2a(2)          ------>ZmHOX2a(1) ------------>CBF------>ZmHOX2a(1)    <----- >>>>MYB2 <---------LBD16         <<<<<<<<<TBF1----------->TBP       <---------At4g35610  --------->ARR14(2)   ctgcgtctcttatctggaaaataatctcattccttcttcttcctcgcctataaatacaactccaatgtctcatctcctacatcacaaaactaaatcccca  27062100                                                                                ----------->RAV1(1)                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                              <------NtERF2                                                                             <---------RAP2.6(3)                                                                             <---------ATERF1(1)                                                                             ------>NtERF2                                                                            --------->RAP2.3(3)                                                                            >>>>>>>>>AtERF-1                                                                            --------->RAP2.6(2)                                                                            --------->ATERF1(2)                                                                            >>>>>>>>>AtERF-4                                                                            <---------ATERF1(2)                                                                            >>>>>>>>>AtERF-7                                                                            --------->DEAR3(1)                                                                            >>>>>>>>>AtERF-2                                                                            --------->RRTF1(2)                                                                            >>>>>>>>>AtERF-5                                                                            >>>>>>>>>AtERF-3                                                                            --------->RRTF1(3)                                                                            --------->RAP2.3(2)                                                                           --------->ERF1                                                 <---------ICU4            --------->RRTF1(1)                                                --------->ICU4             --------->ATERF1(1)                               <---------ZAT2 --------->YAB1               --------->RAP2.3(1)                               <---------At4g35610                   ---------->DOF2 *TSS                 <----------DOF2     <----------DOF2        <---------At4g35610      <---------DEAR3(1) --------DOF2        <------------------------ANAC81             --------->At4g35610     --------->SPL7 ----ALFIN1      <----------DOF2       <-----------GT1    <---------ANAC46<---------ATERF1(1) <------   ctttcacaacaaaaaaactcttttctttttgtctgctcgtttttcttttcataatgggagccttggaagcagaaagagccgccaacaatgctacggcgtt  27062200                                                                                 <---------ZAT14                                                                            --------->LBD16                                                                          --------->ATERF1(1)                                ------->GAMYB                             <------NtERF2                            <---------WRKY12                             ------>NtERF2                      ========================HOX2a_HOX2a                --------->ABI4(1)                      ------>ZmHOX2a(2)                                 <---------ATERF1(2)                     <---------GLK1(1)                                  <---------DEAR3(1)                     =========================HOX2a_HOX2a               --------->RAP2.3(2)                     <------ZmHOX2a(2)                                  --------->ATERF1(2)                    --------->ARR14(3)                                  --------->DEAR3(1)                    <---------ARR14(2)                                 --------->DEAR4(2)                    <-----------ARR10                                  --------->RAP2.3(1)                    <---------AGP1                                     --------->ORA47(2)                    <---------ARR14(3)                                 --------->ERF1                    --------->ARR11(3)                     <---------MYB52(1)  <---------ZAT14                    <---------ARR11(3)                    <-----------HVH21<---------DEAR3(1)                    --------->ARR14(2) ------>ZmHOX2a(1) --------->ANAC46<---------ATERF1(1)               --------->LBD16 --------->MYB46(3)    --------->At4g35610--------->RAP2.3(3)             <---------LBD16<---------WRKY38(1)   <------ZmHOX2a(2)    --------->ATERF1(1)          ----------->HVH21--------->WRKY18(1)   --------->ARR11(3)   <---------ATERF1(1)       <----         <-----------HVH21<-----------HVH21   --------->SPL7 <---------DEAR3(2)--------->ZAT14<------         <-----------TGA1 <--------ZAP1==================HOX2a_HOX2a ------->GAMYB           -------- -----HVH21  --------->At4g35610--------->AtMYB61<---------ARR11(3) --------->MYB46(3)     --------->ALFIN1   agagacacagtcgtcaccggaagatctcggtcaaccatctcctctgcgtaagatcatctccgtcgcttcaatcgccgccggtgtacagttcgggtgggcc  27062300                                                                                              <------                                         ------>ZmHOX2a(2)                                  ---------                                        <------ZmHOX2a(2)                                  <---------YAB1                                       --------->ARR14(2)                       =====================                    ------>ZmHOX2a(1)  <---------ARR14(2)                       ------>ZmHOX2a(1)           --------->At4g35610     <---------LBD16                    <----------DOF2      --------->ICU4    <----------DOF2 ===========================HOX2a_HOX2a           <---------ANAC46  ------>NtERF2  <---------At4g35610             ------>ZmHOX2a(1)                  <---------ANAC58  --------->LBD16  --------->At4g35610             =============HOX2a_HOX2a           <---------ANAC58 --------->ANAC46 ------DOF2----------->RAV1(2)    ==============HOX2a_HOX2a      ------->MYC3   ===================== ---PCF2   <---------At4g35610    <---------LBD16                <-------MYC3   <---------CCA1(2) --->TCP11(1)       ============================HOX2a_HOX2a     <-----------RAV1(1)  <---------LBD16   ttacagctttctcttctgactccttacatacaactcctcgggatccctcacaaatggtcgtcttacatgtggctttgtggtcctatctccggcatgattg  27062400                                                    <------NtERF2                                                    --------->ATERF1(1)                                                   <---------ATERF1(1)                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                 --------->ATERF1(1)                                                 <------NtERF2           <---------ARR14(2)                                                 --------->RAP2.3(1)    <------NtERF2                  <---------ZAT14               <---------ATERF1(1)    --------->LBD16           <---------MYB46(3)                <-----------HVH21        --------->DEAR3(1)           <---------DEAR3(2)              --------->MYB59           <---------LBD16          <---------TOE2(2)               <-------TEIL               --------->ATERF1(1)          <---------DEAR3(1)             --------->ARR14(1)          --------->RAP2.3(1)          <---------TOE1(2)              --------->GLK1(2)           <------NtERF2       ------>ZmHOX2a(2)                --------->ARR14(2)          ------>NtERF2      <------ZmHOX2a(2)                 <---------GLK1(2)           <---------ATERF1(1)     <---------ARR14(2)                 --------->ARR11(1)         <---------ATERF1(2)     --------->ARR14(2)               ----------->ARR10            --------->DEAR3(1)    <---------RAP2.6(3)  --------->MYB46(3)  ----------->HVH21 <---------ARR14(2)   --------->ATHB12 <---------ALFIN1 ---WOX13(1)<-------GAMYB           <-----------------AGL1------>ZmHOX2a(1)--------->ATERF1(1) >ATHB12------------>AtMYB77        ----------------->AGL1<----------DOF2--------->ARR14(2)         - =============HOX2a_HOX2a      <---------ANAC58<---------ETT(2)    --------->ATERF1(2)  --------->DEAR3(1) ============HOX2a_HOX2a       <---------ANAC58<---------DEAR3(1) <---------RAP2.6(2)   --------->RAP2.6(2)   ttcaaccgatcgtcggttaccacagtgaccgatgcgagtccagattcggtcgccgtcgtcctttcattgccgccggagtcgcactcgtagccgtctcggt  27062500                     --------->CCA1(2)                    --------->ARR14(2)                    <---------ARR14(2)                 <---------ANAC46                ------>NtERF2                <------NtERF2                <---------LBD16              <---------RAP2.6(2)              <---------DEAR3(1)                                                       --------->MYB52(1)              <---------RAP2.3(2)                                                     ------>ZmHOX2a(1)             <---------LBD16                                                  --------->YAB1         --------->ARR14(2)                                                  <---------YAB1--------->LBD16         <---------ARR14(2)                                                 --------->AHL20(2)         <---------GLK1(2)                                                 --------->YAB1<---------LBD16  ------>ZmHOX2a(1)<------NtERF2                               <------ZmHOX2a(1)     <---------MYB59 --------->TOE2(3)<---------MYB46(3)             --------->HSFB2a(2)      --------->ICU4-------->P  - ---------------->AGL1                           <---------HSFB2a(2)      <---------YAB1=============   tttccttatcggattcgcggcggatatgggacatagttttggagataaactcgagaacaaggtaaggactcgagccattataatcttcctaaccgggttt  27062600  Previous    Next  AGI:  At1g71890.1    Description:  ATSUC5/SUC5 (SUCROSE-PROTON SYMPORTER 5); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter. Identical to Sucrose transport protein SUC5 (SUC5) [Arabidopsis Thaliana] (GB:Q9C8X2;GB:Q9FNY9); similar to ATSUC8 (SUCROSE-PROTON SYMPORTER 8), carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT2G14670.1); similar to SUC1 (SUCROSE-PROTON SYMPORTER 1), carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G71880.1); similar to SUC2 (SUCROSE-PROTON SYMPOR Range:  from: 27062101    to: 27064447    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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