Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ----------->HVH21                    <---------At4g35610                    --------->At4g35610                    --------->ZAT2                                            <---------ANAC58                    ----------->RAV1(2)                         ------>MYB83  --------->ANAC55(2)                    <---------ZAT2                ---------->DOF2             <---------ANAC55(2)                  <-----------RAV1(2)         <----------ID1    ------>MYB46(1)          <----------DOF2           <---------At4g35610       --------->MYB46(3)     <---------YAB1      <---------CCA1(2)       <-------TEIL   ----------->GT1  <---------MYB59 <---------ANAC46 ------CCA1(2)   ------>ZmHOX2a(2)  --------->At4g35610      --------->ANAC46 <---------ANAC58    <--   tatcttgtctatcttttgatccagctgaagggttcgtctgcttagagagggaaaaaggcttctacccaactatatcaatttcgtaatgtgattcaagaag  27032500                                                          <------MYB83                                                          <------MYB46(1)                         ---                                                       <---------MYB52(1)                    --------                                                     ----------->HVH21             --------->ARR14(2)         ------->TEIL                             <---------ARR11(3)               <---------ARR14(2)        <---------CCA1(2)                         <---------ARR14(2)            <---------HSFB2a(2)    <---------ANAC46                              --------->ARR14(2)          <---------ANAC46    ---    --------->O2                                 <---------CCA1(2)         <-----------RAV1(1)   ----   --------->LBD16                            ----------------->AG      <----------DOF2  <---------YAB1 <---------LBD16                              ----------------->AGL1 <-----------GT1<---------GLK1(1) -------GLK1(1)           <----------DOF2   <-----------GT1       <---------ICU4<---------ANAC46-----   aaacccgcgtgaatctctacattcaagacttttcaatttctgtaaatttccatatctgataggtttcattgttacttttgttgtggaaatgctgattaaa  27032600                                                                                      <---------AHL20(2)                                                               <---------ZAT6        --------->AHL20(2)          --------->RAP2.6(2)                                  ----------->GT1       <---------AHL20(1) ------>ANAC58                                               <---------ANAC46        <---------AHL20(2) ->AHL20(2)                          <---------YAB1    <<<<<<<<<<MYB80               --------->AHL20(1) ------>ANAC58         --------->GLK1(2)              <------MYB46(1)            --------->AHL20(2) ----->DAG2           <---------GLK1(2)               <------MYB83               <---------AHL20(2) ----->DOF2 <------NtERF2    ---------->DOF2     --------->ATHB12  ---------->DOF2<---------AHL20(2)   aagcaaatgaagtcgccaatgcgagattcttcaaagactatgaattcggtttgatttggtttgaagtgtaaaagaaccgaagattaatttaatggtttag  27032700                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                      --------->At5g28300                                        <---                                     <---------MYB46(3)                                  --------->STY1(2)                                     ----------->GT1                                     <---------STY1(2)                          --------->AHL20(2)                                        --------->ARR11(3)                         <---------AHL20(2)                                         --------->GLK1(2)                         --------->AHL20(2)                                     --------->At5g28300--                      --------->AHL20(2)                                       --------->LBD16   <---            <----------DOF2     --------->At4g35610           --------->LBD16 <---------ANAC46   <---           <---------ANAC58   --------->YAB1     ----------->GT1          <---------ANAC58     <-----           <---------ANAC58--------->WOX13(1)    <---------ANAC46         <---------ANAC58    <------         --------->GLK1(2)<---------AHL20(2)     <---------ANAC58    <---------ICU4<---------GLK1(1)    ------->GAMYB    <---------AHL20(2)          <---------ANAC58   <---------YAB1 --------->GLK1(1)< --------->MYB52(1)  --------->AHL20(2)   <---------YAB1     --------->LBD16 <---------LBD16  <------   acttaaccgagtttctttcgaaaataaataaatcagaagcggttaaaattggcgtaaaatgtcccgagtcatcgttgctcgcgggaaatctagctagtgt  27032800              <-------PIF4              <-------PIF5              ------->PIF5       <---------ANAC46     <---------ARR14(2)     --------->ARR14(2)   <-------MYC2   ------->MYC3   ------->MYC2   <-------MYC3  <---------ANAC58  <---------ANAC46  <------NtERF2  <---------ANAC58 ------>NtERF2------->MYC2 -----NtERF2  ------->PIF4 -------DEAR3(2) -------RAP2.3(1) -------RRTF1(1) -------ERF1  ------->MYC3 -------ORA47(2)                                                                            --------- ------DREB2C(2)                                                                           --------->ICU4 ------DEAR4(1)                                                                            <---------YAB1 ------RAP2.3(3)                                                                ------>ZmHOX2a(2) ------DEAR3(1)                                                               <---------GLK1(2) ----->ETT(1) <-------MYC3                                                    --------->ARR14(2) ------RRTF1(2)                                                               <---------ARR11(3) ------RAP2.3(2)     ---------->DOF2                                          <---------ARR14(2) ------->ATERF1(1)   --------->ZAT14               --------->ANAC58        --------->HSFB2a(2)<------ ------RRTF1(3)--------->ANAC46                    ==========================bZIP_DOF    --------->YAB1 ------At1g77200     ========================================bZIP_DOF      <---------HSFB2a(2)------- ------HVH21  <-------MYC2  <---------TOE1(3)      <---------O2        <---------ANAC58 --------->ICU4 ---ZAT6     --------->ANAC58                      --------->ANAC58*TSS<---------ANAC58 <---------YAB1 ---------ANAC46--------->LBD16                    <---------TGA1a<----------DOF2 ------>ZmHOX2a(1) -----RAV1(1)--------->ANAC58           ----------------->AGL1   <---------DAG2<------ZmHOX2a(2)   cggcgcgtgtctggcacgcgcagtaaagttaagctataaactcccaaatcgagacgcgagtctttcgcctttggcttctggatcctcgtgatgatgatga  27032900                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                              -------                                                                                             <-------                             <-----------TGA1                                                --------                         <---------ICU4                                                      <-------                         --------->YAB1                                                      --------                        --------->ICU4                                                       <-------   --------->ARR14(2)   <---------ATHB12                                                     <-------   <---------ARR14(2) --------->WOX13(1)                                                     -------- >YAB1             --------->ANAC58       --------->ARR14(2)                        <---------GLK1(2) ---YAB1           --------->ANAC58       <---------ARR14(2)                       <---------At4g35610 -->ICU4     ---------->DOF2 <-----------HVH21                             <--------P       <--------   tggagaattcgaaatcaaagtaagcaatcatcgtcacttcttcgaatacccctactcaaatcgagaatcacccagaggtaagtttagcttctccagatct  27033000                                                                <---------SPL7                                                                --------->TOE1(2)     <---------ARR11(3)                                  <----------DOF2     --------->ARR11(3)                             <----------DOF2    <---------CCA1(2)                              <---------HSFB2a(1) >ZmHOX2a(2)                                       --------->HSFB2a(1)    <------MYB46(1) -->GLK1(1)                                        ------>ZmHOX2a(2)      <------MYB83 --ARR11(3)            --------->ANAC46           <------ZmHOX2a(2)      --------->MYB59 ->AGP1                --------->ANAC58          <-----------ARR10<---------TOE1(2) --AGP1                --------->ANAC58          --------->ARR14(2)   ------->TEIL ->ARR11(3)           <---------ZAT18            --------->ARR11(3)   --------->ARR14(2) ----ARR10            --------->ZAT18            <---------ARR14(2)   <---------ARR14(2)         <--- --ARR14(2)          <---------ANAC58            <---------ARR11(3)--------->ANAC58              <--- ->ARR14(2)          <---------ANAC46            <---------ARR14(3)--------->ANAC58              ---- -CCA1(2)            <---------ANAC58       <---------LBD16    ------>ZmHOX2a(2)           ------->TEIL   caacttatatctctctctctctagcgcgcaattggaattgaatttttgggggatctttcctttgatcgcacgaatttggtcaccaatttgatgcatttta  27033100                                     <---------ARR14(2)           <---------ARR14(2)        --------->ARR14(2)           ------->TEIL             <------ZmHOX2a(1)              --------->ZAT18           --------->ARR14(2)     <---------TOE1(3)                <---------ZAT14          <---------CCA1(2)       <---------ANAC46                 <---------ZAT18        <---------ANAC58          <---------TOE2(3)                --------->ZAT14        <---------ANAC58      <-------GAMYB                     <---------ANAC46   --------->KAN4(1)         <---------ANAC58                 --------->ZAT14                       - ------At4g35610             <---------ANAC46                 <---------ZAT14                     <-- ------LBD16                 <---------ANAC58          <---------ETT(2)                          <--- ----->At4g35610    --------->AHL20(2)--------->CCA1(2)--------->ETT(2)          --------->GLK1(2)---   gcggaatattgtgtatctaggtttaaatttggcgttgaggatacaaatttcgctatgtcgagagtttagtgtagtatctcaagactctgagccctagcag  27033200                                                       <---------AHL20(2)                                                      --------->AHL20(2)                                                      --------->AHL20(1)         --------->ARR14(2)                           <---------AHL20(2)         <---------ARR14(2)                           <---------AHL20(1)         --------->GLK1(2)                         <---------ICU4 -------->ICU4                                    <---------YAB1                              ------>ZmHOX2a(2) -------ICU4                                      --------->ICU4                          <---------YAB1 ------ATHB12                        <-----------RAV1(1)     ----------->GT1     --------->ZAT14 ------>YAB1                <---------AtMYB61   --------->YAB1                   <---------ZAT14   tcattactaagaatccaggctaagttagagatggtgtttttgtgggggaatcataatttattcgcgttaaattcttctctcagtgaaatgtgatgatccc  27033300                                                                                         <-----------RAV1(2)                                                                                   <---------WOX13(1)                          <---------ARR11(3)                                     --------->ATHB12                       <---------HSFB2a(2)                                       <---------ICU4                       --------->HSFB2a(2)                                      --------->ICU4               <---------DAG2                      --------->ATHB12             <---------YAB1      <               <----------DOF2     --------->TOE1(2) <---------WOX13(1)       --------->YAB1        <          ---------->DOF2 --------->ARR11(3)      <---------YAB1             <---------ATHB12       -   ttctctagtctataaagctttttgtctagatgttgaacatatgagtctggttctgattgatggtttagtagctatatcactcatgattgtttcaggtact  27033400  Previous    Next  AGI:  At1g71860.1    Description:  PTP1 (PROTEIN TYROSINE PHOSPHATASE 1). similar to protein tyrosine phosphatase [Fagus sylvatica] (GB:CAJ77612.1); contains InterPro domain Protein-tyrosine phosphatase, receptor/non-receptor type; (InterPro:IPR000242); contains InterPro domain Protein-tyrosine phosphatase; (InterPro:IPR000387); contains InterPro domain Protein-tyrosine phosphatase, active site; (InterPro:IPR016130) Range:  from: 27030373    to: 27032754    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g71865.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO64617.1) Range:  from: 27032867    to: 27034222    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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