Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC58                              <-                   --------->At4g35610               <---------ANAC46                ================                 --------->YAB1                      <---------ANAC58                ---------->CDC5                 <---------ICU4                  <---------ANAC58        ---------->DOF2      <------              --------->WOX13(1)                 <---------ANAC58        ============================              --------->YAB1              <---------At4g35610         --------->TOE2(3)      <------NtERF2          ------>ZmHOX2a(1)    ---------->DOF2  <---------ICU4      --------->MYB52(1) --------->At4g35610 ----------->GT1<---------ATHB12          --------->At4g35610   --------->ZAT6       ================   attttgttaatcctattaatcatcagcaatttcaaaagcctatcagctaatccttgcttataagtctcactaccgtaaaccaattgctcatcggcatcgt  27029600             <---------ANAC46             --------->O2             <---------ANAC58             --------->TGA1a             <---------TGA1a             =====================bZIP_bZIP             <---------ANAC58                                                      <---------ANAC55(2)             <---------O2                                                          --------->ANAC55(2)           ------>NtERF2                                                           <---------ANAC46           --------->LBD16                                                        <-------TEIL          --------->ANAC46                                                     <---------HSFC1(2)         <---------LBD16                                                       <---------At4g35610      <---------GLK1(1)                              ----------->ARR10         <---------HSFB2a(1)      <---------HSFB2a(1)                        --------->LBD16               --------->HSFC1(2)     --------->GLK1(2)                           <---------HSFB2a(2)           <---------ZAT2     <-----------ARR10                           --------->HSFB2a(2)           --------->At4g35610    <---------GLK1(2)   <---------TGA1a          <---------LBD16              ----------->ARR10 --------ANAC46--------->ALFIN1                 <---------ANAC46              --------->ANAC58 =================================MYC_MYB       <---------LBD16               --------->ANAC58 ---ANAC46<---------DEAR3(1)                  ------>ZmHOX2a(1)      --------->ANAC58 ======================bZIP_DOF           --------->ARR14(2)         --------->ANAC58         ------- ======================MYC_MYB<------ZmHOX2a(1)<---------LBD16     --------->MYB52(1)     ------->TEIL   ggtttagaatctccggcgtgaggctgatgtgaggatgaataccaattcctccggggagaaactcttggaaaacggaagggaagctacgtatgaactcgat  27029700                                                                          <---------YAB1                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                    <------NtERF2--------->ARR11(3)                                                                <---------ATERF1(1)                                 <---------At4g35610          <---------ANAC58   <---------ARR11(3)                                 <---------ANAC46             <---------ANAC58  <------MYB46(1)                        <----------DOF2                      <---------At4g35610<------MYB83                     ------->TEIL----------->GT1   --------->ARR14(2)  --------->ARR14(2)         <---------ARR14(2)   <---------MYB52(1)   <---------ARR14(2)  <---------ARR14(2)        <------ZmHOX2a(1)    <-----------HVH21  ------>ZmHOX2a(2)--------->ATERF1(1)<----------DOF2 - -->ATHB12           --------->GLK1(2)         <------ZmHOX2a(2)------>NtERF2  --------->MYB59     --   tggacgaagaggaactcgtagtgaatctttctgtgaggtgataactgagatcggaactgattttgctggctccgatctgattaggtctttgatactgaga  27029800                                                                                <---------O2                                                                                --------->O2                                                                               <------NtERF2                                                                             ----------->HVH21      -                                                                             --------->DEAR3(1)     <                                                                             --------->At1g77200   --                                                                             --------->DREB2C(2) <---                                                                            --------->ORA47(2)   <---                                                                            --------->ERF1       <---                                                                            --------->DEAR3(2)   <---                                                                            --------->RAP2.3(1) -----                                                                           <---------ATERF1(1)  <----                                                                           ------>NtERF2        -----                                                                           --------->ABI4(1)---------                                                                          --------->DREB2C(2)   <----                                                                          ------->GAMYB     ---------                                                                         --------->MYB46(3) <--------                                                                         --------->DEAR3(2)----------                                         ------>ZmHOX2a(1)       --------->ARR11(3)<---------ARR14(2)                              --------->ALFIN1                   <---------ARR14(2)--------->ARR14(2)                        <---------At5g28300                      --------->ARR14(2)--------->MYB52(1)         --------->GLK1(2)   ------->MYC3<---------At4g35610     <---------ARR11(3)------->TEIL<-----         <-----------ARR10   <-------MYC3--------->At4g35610  <------MYB83--------->DEAR3(1)<--------        <---------GLK1(2)   <---------ANAC46                  <------MYB46(1)--------->RAP2.3(3)----- -------->ZAT18        <-----------GT1 --------->ZAT18       <---------TOE1(2)------>NtERF2<---------TOE1(3) ------->ALFIN1    <----------DOF2     <---------ZAT14 ------->TEIL    <---------ALFIN1    <---------TOE1(2)   agtggtctgagattcttctctctttctaccgcgtggtcgagtcctctgtctcttacgaatttgtaggtatcttccaccgccgacgtatcggcgaaggttc  27029900            <---------RRTF1(1)            ------>NtERF2            <---------RAP2.3(1)           <---------DEAR3(1)           <---------RAP2.3(2)           <---------RRTF1(2)           <---------RAP2.6(2)     <------NtERF2    --------->LBD16    <---------RAP2.6(3)    <------NtERF2   --------->RAP2.6(2)  <---------LBD16  <---------ANAC46 <------NtERF2 ----->NtERF2 ---------MYB46(3) ------->ALFIN1         <---------------AtSPL8 ------ANAC58<------NtERF2 ------ANAC58<---------LBD16 ---MYB83--------->MYB52(1) ---MYB46(1)<---------ERF1 ---->MYB52(2)   <---------ARR14(2) -----MYB46(3)   --------->ARR14(2) ---->MYB55(2)  <------NtERF2--------->ANAC58 >HSFC1(2) <---------DREB2C(2) -----DEAR3(1) <---------MYB46(3) >HSFB2a(1)<---------RRTF1(3)--------->ANAC58 -HSFB2a(1)<---------RAP2.3(3)          --------->GLK1(1) ->ARR10----------->HVH21  --------->MYB52(1) --TEIL ----------->TGA1<---------------AtSPL3<---------DEAR3(1) -HSFC1(2)--------->RAP2.6(3)----------->GT1 <---------At4g35610<---------TOE1(3) ---->MYB46(2)<---------ANAC46          <---------GLK1(1)       <---------TOE2(3)      <---------YAB1   ggtggccggaatgacggcggatagaaatggaacggaaaatggatttcatcggcgatttgattttttagggtttaagagggttttggctcatcaatggtgt  27030000                          <-----------HVH21                     --------->ALFIN1                     <---------ANAC46                                                               -                 --------->At4g35610                                                            <----                 <---------ZAT2                                <---------MYB46(3)              ------                 --------->ZAT2                             <------------CBF                  >>>>>>>                 <---------At4g35610                       --------->ATHB51          <---------ANAC58             --------->ALFIN1          --------->ANAC58    --------->ATHB12          <---------ANAC58           <---------ANAC46            --------->ANAC58   <---------YAB1           <---------ANAC46 <    --------->ARR11(3)   *TSS         <---------LBD16  <---------YAB1    <----------DOF2     --------   ttcgaagacattgatgtggagctgtgtgtgtcactcgagactcggaagtgaagagtttttattattggttatgggcttttaagttgggcgttttaggccc  27030100                           <----------DOF2                   --------->WRKY38(1)                <---------TGA1a                <---------bZIP60(2)                --------->O2             --------->YAB1                <---------O2             -------->HAHB4                <---------ANAC58         --------->ATHB12                --------->bZIP60(1)      <---------ICU4 -------->ZAT14 <---------ANAC58        <---------YAB1                                      --------- -----ALFIN1    <---------ANAC46        --------->ICU4                                      <-------- --->ZAT18   ----------->HVH21        --------->YAB1                              ---------->DOF2 >>>>>>>>>>LFY  ======================bZIP_DOF                                ---------->DOF2 ---------ZAT14 <---------bZIP60(1)  <---------YAB1                 --------->ANAC46       <------ZmHOX2a(1) ->PCF2      ----------->TGA1      --------->YAB1         ----------->GT1    --------->AHL20(2)  <---   actgtagttttttctgtgacgttgcccatctttttttttataatgatgagcccatctaaaatgttattctacaaaacaataaaagaaagaccaggattcc  27030200                                                               --------->YAB1                                                               <---------ICU4                                                              <---------ATHB51                                                              --------->ICU4                                                            --------->YAB1                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                               <---------ATHB12-------->HAHB4    <---------YAB1                                      --------->YAB1      <---------YAB1       --------->YAB1                                      <---------ICU4      --------->ICU4       <---------ICU4                                     <---------YAB1     <--------HAHB4        --------->ICU4     ---------->DOF2                <---------AHL20(1)  --------->ATHB51  <---------AHL20(2) <---------ANAC58                   <---------AHL20(2)  <---------ICU4    --------->AHL20(2) <---------ANAC58                  --------->YAB1      <---------YAB1    --------->YAB1 >ARR14(2)                        <---------YAB1     --------->YAB1      --------->AHL20(2) -ARR14(2)         <----------DOF2<---------AHL20(2)<---------ATHB12    <---------ATHB12 -------DOF2       ------>ZmHOX2a(1)--------->AHL20(2) --------->ICU4 --------->WOX13(1)            -   tttgcttaaaagaccagggtcctttgctaaaactatattataatgaccaatgaaatcataattaataatgaccaattaaaatgatgacaaaaaaaaaaaa  27030300                   --------->AHL20(2)              <---------AHL20(2)           ----------->GT1       <---------YAB1      --------->AHL20(2)      <---------AHL20(2)--------->YAB1         <-----------RAV1(1)                                <--     --------->AHL20(2)<---------YAB1   --------->YAB1                                           ----     --------->YAB1<---------AHL20(2)<----------DOF2                                             ----    <---------ATHB12   <---------AHL20(2)    <----------DOF2             *TSS          --------->YAB1 ----------->CBF --------->AHL20(2)  --------->TOE2(3)     ---------->DOF2  --------->YAB1--------->YAB1   aacccaattaaaatagtaaatttatattatagtcatcaactttaatactttgttgcaaaataaaaggaaacagtcgcataataatccactaatcacaaac  27030400                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                   <---------ALFIN1                                                                  ----------->HVH21                                                                --------->bZIP60(2)                                                                --------->ATERF1(1)                                                                <------NtERF2                                                               <---------ATERF1(1)                                                               ------>NtERF2                                                               --------->ABI4(1)                                                              --------->RRTF1(2)                                                              <---------ALFIN1                                                              --------->ATERF1(2)                                                              --------->RAP2.3(2)                                                              --------->RAP2.6(2)                                                              --------->RAP2.3(3)                                                              <---------ATERF1(2)                                                              --------->DREB2C(2)                                                              --------->DEAR3(1)                                                              --------->RRTF1(3)                                                             --------->ORA47(2)                                                             --------->ATERF1(1)                                                            <---------ATERF1(1)                                                            <---------At4g35610                                                            --------->ABI4(1)                       <                                                            ------>NtERF2                          <-                                                            --------->At4g35610                 <----                                                           --------->DEAR3(1)                   -----                                                          <---------LBD16 <---------ANAC46      <----                                                      --------->GLK1(2)--------->TGA1a         ------                                                     --------->ARR14(2)<---------TGA1a         <-----                                                     <---------GLK1(2) ----------->HVH21       <-----                                                     <---------ARR14(2)--------->O2           -------                                                <-----------HVH21<-----------HVH21            <------                                              --------->DAG2--------->LBD16                   <------                                            ---------->DOF2--------->ANAC46                   -------                       --------->YAB1       =====================================bZIP_DOF     <------            --------->HSFB2a(2)         <---------------AGL15--------->RRTF1(1)               -------            <---------HSFB2a(2)         --------------->AGL15--------->RAP2.3(1)              <------            <---------LBD16            <-----------------AGL1--------->DEAR4(2)            ------>ZmHOX2a(1)     <----------DOF2  <---------ATHB12 ----------------->AGL1--------->ERF1                ========== --------DOF2<---------LBD16         <-----------GT1<---------At4g35610--------->ANAC58    ========== ----->TOE2(3)      --------->WOX13(1) ----------------->AGL2--------->RAP2.6(1)       --------->ARR14(2) ----->TOE1(3)   ------>NtERF2   --------->WOX13(1)----------->ARR10 --------->ANAC46  <---------ARR14(2)   ctttaccctttcttctcggggccaatcaaaaacttcaattaaccagaaaaggtcagattctccgccgcctcacacgacgggcaacttcagttcctgccgt  27030500  Previous    Next  AGI:  At1g71850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64799.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) Range:  from: 27028394    to: 27030025    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g71860.1    Description:  PTP1 (PROTEIN TYROSINE PHOSPHATASE 1). similar to protein tyrosine phosphatase [Fagus sylvatica] (GB:CAJ77612.1); contains InterPro domain Protein-tyrosine phosphatase, receptor/non-receptor type; (InterPro:IPR000242); contains InterPro domain Protein-tyrosine phosphatase; (InterPro:IPR000387); contains InterPro domain Protein-tyrosine phosphatase, active site; (InterPro:IPR016130) Range:  from: 27030373    to: 27032754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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