Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ANAC58                                     <---------AtLEC2                            <---------YAB1                           <----------DOF2                        --------->ARR11(3)                        <---------AHL20(1)        <---------ATHB12                        <---------ARR11(3)      --------->WOX13(1)                     --------->YAB1  <---------ANAC58                                <---------------AGL15                 --------->ZAT6      <---------ANAC46                               <----------------     <---------GLK1(2) <---------CCA1(2)----------->GT1                      --------->AHL20(2) ---ANAC46  --------->At4g35610 <-----------RAV1(1)--------->YAB1    ----------->GT1<---------------- ->MYB59    <---------At4g35610<---------YAB1 <---------YAB1     --------->MYB46(3)<-----------GT1   ttagaaagaatatcagcaaacactaatatctttattgttgcatggtttatcaatcacaaaattcacaaccattgtaaaaaaaaattcacatttttggtat  27021400                                                                 --------->GLK1(2)                                                                 <---------ARR11(1)                                                                 <-----------ARR10                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                              --------->ANAC55(2)                                                       --------->LBD16 <---------ANAC58                                                      --------->ANAC55(2)                            <---------TOE2(3)    <---------ICU4  ------->TEIL                   ------->TEIL       <----------DOF2 <---------ANAC55(2)                 <---------ZAT18   <-----------GT1   <---------LBD16   <---------ANAC58     --------- -AG      <---------YAB1<----------DOF2       --------->YAB1  <---------ANAC55(2)         ---------->DOF2 -AGL3  --------->ANAC55(2)<-----------GT1 <----------DOF2    <---------YAB1   --------->YAB1     <--   gagattgctcacatgatagtgaacctctttaacattttaactttactttcataaatacgggattacgaatcttacttgcattaaaaatttagaaaaggtt  27021500                          ------->GAMYB                       ------>MYB46(1)                       ------>MYB83                       --------->MYB52(1)       --------->MYB52(1)                     --------->MYB46(3)         --------->CCA1(2)                    --------->ANAC58           <---------ARR14(2)                    --------->ANAC58     <-----------RAV1(2)              --------->DAG2          <---------WRKY18(1)              <----------DOF2 <---------------AGL15 ==============================RAV            --------->ARR11(3) --------------->AGL15 ----------->RAV1(1)  <------ZmHOX2a(1) --------->TOE1(3)  <---------DAG2------ >DAG2---------->DOF2<---------MYB59 ----------->HVH21 <-------TEIL <---------ARR11(3) --------->ANAC46 ---------GT1---------->DOF2         --------->WRKY38(1)      --------->TOE2(3)  <----------DOF2   tttctacttaaagaaaaaagggacccaacagagagaggtttgaccaggagaaacgggtgcatagccttaagagctttcaactactttaccccaaacccaa  27021600                                                                            <---------ANAC55(2)                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                   --------->ZAT2                                                                   <---------ABI4(2)                                                                --------->ZAT2                                                                <---------At4g35610                 <---------CCA1(2)                              --------->At4g35610               --------->AtMYB61                                <---------ZAT2               ------->GAMYB                               <---------HSFB2a(2)    <---------ZAT2              --------->MYB46(3)        <----------DOF2    --------->HSFB2a(2)    --------->At4g35610        <----------DOF2                <---------MYB52(1) <---------LBD16<---------MYB52(1)   <-----------HVH21              ------->TEIL        <---------DEAR3(2)<-----------HVH21  <---------bZIP60(1)          --------->LBD16     <-----------HVH21<---------ALFIN1  --------->bZIP60(1)         --------->ANAC46<---------WRKY18(1)  --------->At4g35610       ------>ZmHOX2a(1)  --------->bZIP60(2)         --------->LBD16 <-----------GT1   <------NtERF2     <---------At4g35610 ---->DOF2  <-----------GT1  <---------LBD16 ----------->HVH21 ----------->RAV1(1)<------NtERF2   agcgatgtcactttcaaccatctcttctctcccccgaacccgtttttttgaccggtcagttcgggcagcagcaccgttacgggcagcttatattcctcgt  27021700                                                     --------->AHL20(1)                                              <----------DOF2                                            <---------RVE1(1)                                            <------ZmHOX2a(2)    --------->AHL20(1)            <---------ALFIN1               --------->AGP1        <---------AHL20(2)            --------->AtMYB61              --------->ARR11(3)    <---------AHL20(1)         --------->REM1(1)                 <---------ARR11(3)<---------AHL20(2)      <---------AHL20(2)         --------->ANAC46                ----------->ARR10<---------AHL20(2) --------->DAG2        --------->ZAT14               <---------MYB52(1) --------->AHL20(2) ---------->DOF2     ------>ZmHOX2a(1)               <-------GAMYB   <---------AHL20(1)  ------->GAMYB    --------->YAB1  ------>ZmHOX2a(1)           ---------->DOF2------>ZmHOX2a(2)--------->AHL20(2)     --------->AHL20(2)   cttcctcctctacaccactgcatgcccataaataaagcccgttgagatctttaaaaatattaaataatatatcaacgaaaaagctattttattcataaga  27021800                                                                     ---------->DOF2                                                                   <---------AHL20(2)                                                          <---------ANAC58                                                          <---------RAP2.3(2)           <-----------GT1                              <---------ICU4              <---------ANAC58             <---------YAB1                              --------->YAB1              <---------ANAC46           <---------ICU4 <                             <---------YAB1               <---------RAP2.6(2)       <---------YAB1  -                      ------->GAMYB                      <---------LBD16            --------->ICU4  <                     <---------ALFIN1                <---------MYB46(3)     <----------DOF2         -                    *TSS     <---------ATHB12        <---------REM1(1)   <---------ARR11(3)       <--                   ----------->RAV1(1)               <-----------RAV1(1) --------->ARR11(3)       ---         <------ZmHOX2a(1) --------->YAB1       <---------ANAC58   --------->AHL20(2)--------->YAB1 < ---------->DOF2  --------->MYB46(3)            <---------ANAC58   --------->YAB1<---------YAB1------   agaaaaagagaggaacaacaacaacacactaatcatagtttctctggcaggcttgttgttgcggcttaataaaaagctcttttgttattattacttcacg  27021900            --------->DAG2       --------->LBD16      --------------->AGL15 ---------ARR14(2) -------->ARR14(2) ---------GLK1(2)                                                          --------->ALFIN1 -------->ARR11(3)                                <----------DOF2          <---------ANAC58 -------TOE2(2)--------->ARR11(3)                <---------ICU4          --------->ALFIN1           < -------->ARR10<---------ARR11(3)       --------->DAG2               <---------At5g28300        <---- ---------ARR11(3)     <---------AHL20(2)    <-------TEIL           <-----------GT1            <----- --->ANAC46---------->DOF2             ---------->DOF2      <----------DOF2<---------ANAC58  --------   tagattttccccaaaaagctcttatttttttgtttaaaaaaaaaagtttcatctttattcaacttttgttttacagtgtgtgtgtgagagagagagtgtg  27022000        <------ZmHOX2a(1)      <---------TOE2(3)                  --------->ARR11(3)   <---------WOX13(1)         --------->LBD16 --------->ATHB12            <---------ANAC46     --------->AHL20(2) ---------YAB1               --------->DEAR3(1)   <---------AHL20(2) -----MYB46(3)    ------>NtERF2<------NtERF2  <------------------------ANAC81 ----AtMYB61     --------->DEAR3(1)     <------ZmHOX2a(1) <-----------GT1<---------AHL20(2) ->ALFIN1---------->DOF2    <---------LBD16  <---------YAB1    <----------DOF2--------->YAB1 --------   gtttgattgaggaaagacgacgacgagaacgccggagaattaggattttgattttattttttactctttgtttgttttaatgctaatgggtttttaaaag  27022100                                                                                       ------>ZmHOX2a(2)                                                                                      --------->At4g35610                                                                                      <------ZmHOX2a(2)                                                                                     <---------AGP1                                                                                     --------->ARR14(2)                                                       <---------MYB46(3)        <---------LBD16                                         ---------->DOF2             ----------------------->TaNAC69(2)                                         --------->ZAT14        <---------HSFB2a(2)  <---------ARR14(2)                                         <---------ZAT14        --------->HSFB2a(2) <---------CCA1(2)                            <---------TOE1(3)         --------->ALFIN1   <---------TOE1(3)      <----                            <---------TOE2(3)      <-----------RAV1(1)   <---------TOE2(3)     <-----                       <-----------RAV1(1)--------->DAG2       <---------LBD16   <---------HSFB2a(2) -->DOF2    --------->ATHB12<---------AtMYB61<---------ZAT6 <----------DOF2      --------->HSFB2a(2)   ggttatcgaaaaaatgagtgagtttgtgttgaggttgtctctgtaaagtgttaatggtggtgattttcggaagttagggttttctcggatctgaagagat  27022200        <-------TEIL       --------->ARR14(1)       --------->CCA1(2)      <---------ARR14(2)                                                                           <-      --------->ARR14(2)                                                                --------->WOX13(1)      <---------GLK1(2)                                                               <---------ATHB12      --------->ARR11(1)                                <---------CCA1(2)            <---------ARR11(1)    <---------YAB1                                  <---------ANAC46      ------>ZmHOX2a(2)        <- <---------ATHB12                                 <---------ANAC46      <---------ARR11(3)    <------ --ZmHOX2a(2)                                  <---------ANAC46 <----------DOF2    --------->LBD16 <- ----ARR11(3)              <---------ANAC46    <-----------RAV1(1)      --------->ARR11(3)  <--------   caaatcaagattcgaaatttagcattgttgtttgaaatggagtcgagttatgtggtgtttatcttactttcactgatcttacttccgaatcattcactgt  27022300  Previous    Next  AGI:  At1g71830.1    Description:  SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase. similar to SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT1G34210.1); similar to BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE), kinase [Arabidopsis thaliana] (TAIR:AT4G33430.1); similar to ATSERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4), protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G13790.1); similar to somatic embryogenesis receptor-like kinase 1 [Solanum peruvianum] (GB:ABR18800.1); similar to somatic embryogenesis receptor kinase [Carica papaya] (GB:ABS32233.1 Range:  from: 27021820    to: 27025779    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version