Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->TOE1(2)                                                            --------->TOE2(2)                                                      <---------At4g35610                                                      --------->At4g35610                                                  ------>ZmHOX2a(2)         <---------At4g35610                     <------ZmHOX2a(2)         --------->At4g35610                    <---------ARR14(2)         --------->ZAT2                    <---------ARR14(2)           --------->GLK1(2)      <---------At4g35610                  --------->ARR14(2)  --------->ANAC46 ------>DOF2                  <---------ATHB12  --------->ARR14(2) --------->At4g35610             <-   aaagcctcatcagctaagcgaagcccaaaccaataactaaacgtagttccgatctgagctaatctacgaagcagaatcagaggtttcttcttatacatcc  27011400                                                                             ----------------------->TaNAC69(2)                                                                        <-----------GT1              <---------------AtSPL8                                 <---------ARR14(2)       --------->LBD16                                               --------->ARR14(2)      ------>ZmHOX2a(1)                                            --------->LBD16                  -      --------->LBD16                                            <---------LBD16                    -     --------->TOE1(2)         --------->GLK1(2)                --------->MYB52(1)                  -     <---------LBD16      ---------->DOF2                      <-----------GT1<---------ZAT6     <---     --------->TOE2(2) ----------->RAV1(1)                     --------->MYB52(1)               ----- --------->WOX13(1)    ------>NtERF2     --------->At4g35610 <---------MYB52(2)                 <---- --------ATHB12       <---------ETT(1) ---------->CDC5 <---------ZAT14--------->GLK1(1)   --------->REM1(1)   catcaatcctgggaaaattgtactccgacaaagaatcagcctcatcggcactgagactgaacaaataaccggatttactagtgaaactatctacatctct  27011500                              ------>ZmHOX2a(1)                          --------->ARR14(2)                          <---------ARR14(2)                        --------->HSFB2a(1)                                       <------NtERF2     <---------ANAC46   --------->HSFC1(2)          <---------MYB46(3)           --------->LBD16    --------->At4g35610 <---------HSFC1(2)        <-------GAMYB                 >>>>>>>>>>E2Fa    <------NtERF2     <------NtERF2     ------>NtERF2                           <---------ANAC58    <---------At4g35610 <---------HSFB2a(1)      <---------MYB46(3)             <---------ANAC58  <-----------RAV1(2)--------->LBD16   <---------DEAR3(1)            <---------ARR14(2) -------->ANAC58    <---------DEAR3(1) --------->DEAR3(1)            --------->ARR14(2) -------->ANAC46    <---------ANAC46  --------->ATERF1(1)        --------->At4g35610 -------->ANAC58   <---------LBD16    --------->RAP2.6(3)        <---------At4g35610 ---------->DOF2 ------REM1(2)--------->MYB46(3)    ----------->HVH21          --------->YAB1   <---------ANAC46 ---->HSFB2a(2)   ------->GAMYB    <---------HSFB2a(2)      --------->WOX13(1) <---------LBD16 -----HSFB2a(2)--------->MYB52(1)  --------->HSFB2a(2)<---------ANAC46     --------->ARR14(2)--------   agacgcagcggagacaacaacggcggagtttcctcttcgcgacggccaagatggttgtggattaatcagcagattgggattggcgggaaaagaaacgatt  27011600                                                                                        --------->GLK1(2)                                                                                       <---------ARR11(3)                                                                                 <---------MYB46(3)                                                                                 <------MYB83                                                                                 <------MYB46(1)                                 --------->GLK1(2)                            <-------GAMYB                                 <---------ARR11(3)                          --------->MYB55(2)                             --------->YAB1                                  --------->MYB111(2)                          <----------DOF2                                    <---------MYB46(3)     -                      <---------CCA1(2)                                      --------->MYB111(1)-----                   --------->HSFC1(2)                                     <---------MYB46(3)    <----                   <---------HSFC1(2)                    <----------DOF2 <---------ATHB12  <---------YAB1                   --------->HSFB2a(1)       --------->ARR11(3)<<<<<<<<<TBF1<--------P --------->ARR11(3) ->ATHB12    --------->At4g35610 --------->ARR11(3)<----------DOF2 --------->ANAC46  ----------->ARR10   ggcatagaagaaggaagccgaagcatctctttcaaaatctacagagttatcttctttttcttttcttcttcgccaatggttgttggtgagattttgaata  27011700        --------->ARR14(2)        <---------GLK1(2)        <---------ARR14(2)   <---------ANAC46                                                               <----------DOF2 -------->AtLEC2                                             <-----------GT1   <-----------GT1 ---->ARR11(3)                --------->AHL20(2)        <----------DOF2    <----------DOF2     ------ -----ARR11(3)         ----------->GT1             <-----------GT1<-----------HVH21            <-----   tcatgcagtggattcttctaagaaatggcaaataatatggttctctactgttttatctcttttttgccggtcacattctttatactttctctctctctcg  27011800                                                                                  <----------DOF2                                                                                  <---------------AGL15                                                                                  --------------->AGL15                                              ------->TEIL                        <---------DAG2                                          --------------->AtSPL8         <---------AHL20(2)                                     <---------ATHB12                    ----------->TBP                                    ------>MYB83              --------->AHL20(2) <-----------------AGL3                                 <------NtERF2<---------TOE1(2)          --------->AHL20(2)                                ------>NtERF2<-----------GT1  <---------AHL20(2)------->TEIL    -----    <---------ANAC46  --------->ANAC58 <----------DOF2      <-----------TBP <---------------AtSPL8 -- --->ETT(2)           --------->ANAC58*TSS<---------------AtSPL3   <-----------HVH21      <---------At4g35610 ----ETT(2)       <-----------HVH21 ------>MYB46(1)     --------->ANAC55(2) --------------->AtSPL8<--   acatttgctgggattttctgtgtcacacaaatggcaccaatctttttgtacgttttttaagtatttatatgtcatataaatgtactttatttagctacta  27011900                                                       <---------ANAC55(1)                                                       <---------ANAC55(2)                                                       <---------YAB1                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                     <-----------GT1                                                  <--------ATHB1                                                  --------->ATHB51                                                  --------->YAB1                                                  <---------ICU4                                                  -------->HAHB4                                                  <--------HAHB4                                                 <---------ATHB51                                                 --------->ICU4         <---------MYB46(3)                      --------->AHL20(2)     <---------AHL20(2)                          <---------YAB1                     --------->DAG2 ---->YAB1 <--------P                          --------->YAB1                      ---------->DOF2 ------->YAB1--------->MYB52(2)               <---------YAB1                --------->TOE1(2) -------ATHB12               <---------YAB1 --------->YAB1                  --------->TOE2(2) <------   atcatattttttggttagtgactaaaactgtatcattccaaactattcataataattacgtttaaaacttaagaaaaacatatgaaaaagtttgtagatt  27012000                             <----------DOF2                                                       <-                        <---------ANAC58                                                  <---------ARR14(2)                       --------->HSFB2a(1)                                             <-------------                       <---------HSFC1(2)                                  <---------ARR11(3) <------MYB46(1)                       --------->HSFC1(2)                                  --------->AHL20(1) <------MYB83         <-----------GT1<---------ANAC58                    ---------->DOF2--------->ARR11(3)--------    <---------AHL20(2) <---------HSFB2a(1)      <---------ANAC46    ---------->DOF2   <-------------- ---GLK1(2)      ------>ZmHOX2a(1)    ---------->DOF2     <---------AHL20(2)          ===============   gtctgtttatttatctgtccttggatgcttcctttgaagaaaaagaaatttagtgtatatataaaagagataaagaatatatcacatccacatatttggt  27012100                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                  <---------ARR14(2)                  <---------AGP1                                      <---------ARR11(3)   --------->AHL20(2)                  <---------ARR11(3)                                  --------->GLK1(2) <---------ICU4 --------WOX13(1) --------->ARR11(3)              --------------->AGL15                --------->ICU4 --AGL15          --------->ARR14(2)              =================================================== ->MYB59         <---------CCA1(2)       <---------ATHB12             --------->ARR14(2)--------->YAB1 ---AG  <-----------GT1     <----------DOF2       <----------DOF2 --------->YAB1 --------->At4g35610 =================================================================MADS_MADS      --------->ZAT2   aattgatatataactctgtagatcttattccttttagataccaatgactcttctttttatgtaaaccatcaaaatctgaaacaagctgaataatgaaata  27012200               <---------AHL20(2)             <---------AHL20(2)            <---------AHL20(1)            --------->ARR11(3)            <---------AHL20(2)            --------->AHL20(1)                                                                  <----            <---------ARR11(3)                                                              <--------            --------->AHL20(2)           --------->ICU4                                    <---------AHL20(1)           --------->AHL20(2)       ----------->GT1                                        --------->AHL20(2)       --------->AHL20(2)      --------->ICU4--------->YAB1                                <---------AHL20(2)    --------->TOE2(3)        ----------->GT1<---------YAB1                                 --------->AHL20(1)  <---------ARR11(3)  <---------------AGL15<---------ARR11(3)                              --------->ARR11(3)  --------->ARR11(3)  --------------->AGL15--------->ARR11(3)                              <---------ARR11(3) <---------CCA1(2) <-----------GT1--------->ICU4                                        --------->AHL20(2) =====================================MADS_MADS<---------YAB1  <---------ANAC46      --------->YAB1   cacatatcttaaaatatatttttactagtagtagtaattagtaaatatcataatatcagtttgtggagtattttagaaagaattcgaacataatatattt  27012300  Previous    Next  AGI:  At1g71810.1    Description:  ABC1 family protein. Identical to Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplast precursor [Arabidopsis Thaliana] (GB:Q94BU1;GB:Q8RXG7;GB:Q9M9G5); similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT1G79600.1); similar to hypothetical protein OsI_016979 [Oryza sativa (indica cultivar-group)] (GB:EAY95746.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ58703.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67557.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Range:  from: 27006076    to: 27011838    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version