Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  ---                                                                                                 <---                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              -------                                                    <---------ANAC58                          <------NtERF2                                            <---------TOE2(3)                                 <------                                        --------->AHL20(1)                                   <-------                                       <---------ICU4    <<<<<<<<<MYB2                      <--------             <---------ATHB12         --------->ICU4<---------ANAC58                      <---------MYB46(3)    --------->YAB1                 --------->AHL20(2)  <------MYB83                      <---------AtMYB61 ------------>AGL15            <---------ANAC46    --------->ATHB12                      --------->ALFIN1 ------------->AGL3            ----------->GT1  <---------GLK1(1) ---------->DOF2     --------->ATHB12 --DOF2--------->MYB52(1) ---------->DOF2<---------YAB1<------MYB46(1)              --------->GLK1(2)   ccataaatataacgaatgatgcagttttaaaagtcgtataaatattatggaaatgcttggttttctccaaaagtatagaatagcagaatcagtggtggct  27002700         <---------ZAT18      <---------ANAC46 --------->RAV1(1) -------->HVH21 ---NtERF2 ----DEAR3(1)                                                                                    ---- ----ANAC46                                                                                   <------ -->At4g35610                                     --------->ZAT18                             ------- -->ATERF1(1)         ---------->DOF2         <---------bZIP60(1)                      ----------->GT1 ---At4g35610       <---------MYB59           --------->bZIP60(1)     --------->MYB52(1)      ------- --MYB46(3)      <------ZmHOX2a(1)         <---------ZAT6         <-------TEIL       ---------->DOF2 -RAP2.6(2)  --------->TOE1(2)    --------->TOE2(3)              --------->AtLEC2---------->DOF2 ----   gcgacatgttgtgaacttaggacctaaagcatcaaacctcatttagtgatatcgcactgccttcgacatgcataccgaatggacaaagaaagtaagaatc  27002800                                                                        <---------ATHB12                                                                      ------>MYB46(1)                                                                      ------>MYB83                                                                 ------->GAMYB            <---------YAB1                                                                <---------MYB111(2)      <---------ARR11(3) ----->TOE2(3)                                                  --------->MYB46(3)       --------->ARR11(3) ---ARR14(2)                                     <-----------HVH21  --------->TOE2(3)    --------->AHL20(1) -->GLK1(2)                                --------->HSFB2a(2)--------->YAB1<---------ATHB12 -->ARR14(2)                          <------NtERF2 ----------->GT1 <---------MYB59      <---------AHL20(1) ----------------->WRI1<---------MYB52(1)  <---------HSFB2a(2)<-----------GT1--------->YAB1        --   cttgatgtaatcgccatatgagtccgtttagcgcctaggtgccatctagacggtcagtaactaataacaacctaatcaataactatacaaatatttttgt  27002900                        <---------AHL20(1)                        --------->AHL20(1)                        <---------AHL20(2)                        --------->AHL20(2)                       --------->AHL20(2)                       <---------AHL20(2)                           <----------DOF2                   --------->AHL20(2)                  <---------DAG2               <---------CCA1(1)                       <----------DOF2               <---------RVE1(1)                      --------------->AGL15                       ---              --------->AHL20(1)                     <-----------------AG                         <--              --------->ARR11(3)    <-----------GT1  <-----------------AGL1  <---------YAB1     -----              <---------ARR11(3)<----------DOF2      ----------------->AG <---------AHL20(2)   <-----          ---------->DOF2   <-----------GT1 --------->RVE1(1)   <----------DOF2                ------ --------->RAV1(1) <---------AHL20(2)  --------->TOE2(3)    <---------RAP2.6(2)     <---------REM1(1)   ccaacatataaaaaaagatattaaaataaatttccttttaaccaaaatatcagtttcctttttcggctttcttttttttattcttgttgtagagagagat  27003000            --------->DEAR3(1)  --------->AHL20(2)  <---------AHL20(2) ------>AHL20(2)                         <---------ICU4 -------AHL20(2)   <---------DEAR3(2)    --------->AHL20(2)                                   <------ ---->CCA1(2)   ------>NtERF2           --------->AHL20(2)                                  --------- ----ARR11(3)  --------->DEAR3(1)       <---------AHL20(2)           <----------DOF2----------->GT1 - --->ARR11(3)------>NtERF2 <---------ATHB12                     <-----------GT1  --------------------   ataaataaatatcgacgacgacggtactaatcgttttgctaaataatttcattcgtcttctcttcttaactctttaaaaccaaaaactgaaaaataaaga  27003100                                ------>ZmHOX2a(2)                               <---------GLK1(1)                               <------ZmHOX2a(2)                               --------->GLK1(1)                              <---------AGP1                        --------->ANAC58                        --------->ANAC46                        --------->ANAC58                     <---------ARR14(2)              *TSS   --------->ARR14(2)                                                           <--         =============================HOX2a_HOX2a     --------->ANAC46                            <-- --------->DAG2 ------>NtERF2 --------->ARR11(3)     <---------TOE2(3)                         <----- ----ID1 ==============================HOX2a_HOX2a   <---------TOE1(3)                        <------ ->DOF2  ------>ZmHOX2a(1)---------->DOF2  <---------At4g35610                      ------->TEIL ---- --------->DOF2--------->DEAR3(1)          --------->At4g35610           <---------ARR14(2)  -------- ---->ANAC81<---------ETT(2)  <---------ARR11(3)    <-----------GT1      --------->ARR14(2)  --------   caaaaagtctcctatcgacgacgaatacgaaagatctctctcttcagaagaatttaacgaaactcaactgtttcgaattcgatttgaatctcgacccgtt  27003200                                                                                              <------                                                                                      ------->GAMYB      <------ZmHOX2a(1)                                                      <---------ICU4  <------- -------ANAC58                                                              <---------YAB1   <------- -------ANAC58             --------->REM1(1)                              --------->YAB1     <------- ----MYB52(1)              <---------ALFIN1             <---------ICU4    <---------ICU4    ------>NtERF2 -----HVH21              <----------DOF2   <---------ARR11(3)       <---------ANAC58 --------->MYB46(3) ----->MYB52(2)   <---------At4g35610    <---------MYB52(1)         <---------ANAC58 ----------->HVH21 --->GT1       ---------->DOF2           --------->DOF5.7(2)<<<<<<<<<<<<<<<<<LFY   --------->MYB52(1) ->ANAC46     <---------REM1(1)    <<<<<<<<<TBF1        --------->YAB1 --------->REM1(1)<---------DEAR3(1)   acttagcaggaagaagatgaagcagcgcttcaccttcttcttcgttatcttctcttaataatccccaatggcttcatcatcatcccaacgacgctgcgtt  27003300                                           --------->ARR14(2)                        <----------DOF2     <------------MYB.PH3(2)     --------->ZAT6                          ---------->DOF2 ----DOF2                     <---------ICU4                           <----------DOF2 --ANAC58             <<<<<<<<<TBF1        <---------ARR14(2)         <---------ANAC58 --ANAC46          <<<<<<<<<TBF1<---------YAB1                        <---------ANAC46 --ANAC58       <<<<<<<<<TBF1 --------->YAB1                          <---------ANAC58   tttggtaactcactcttcttcttcttcttccattatcactctgtgaattctcttcgattttggattcaattggcttaaagttttcgactttcttcgtcta  27003400                        ----------->HVH21                       ------>NtERF2                      --------->ANAC46                   --------->ANAC46                  --------->SPL7                ------>ZmHOX2a(1)               <---------ANAC58               <---------ANAC58           --------->KAN4(2)          --------->HSFB2a(1)          <---------HSFB2a(1)          --------->HSFC1(2)          <---------KAN4(1)                                                               <----------          --------->KAN4(1)                                                     --------->MYB59     -          <---------HSFC1(2)    <------ZmHOX2a(1)                          <---------ANAC46         <         <---------KAN4(2)------>NtERF2                                  <-----------------AGL1     <   ttttagttgggaacattccttacgacgcgaccgaggaacaacttagagaaatttgtggagaagttggacctgttgtctcgtttaggtcagttttatcgtt  27003500          <---------TOE2(3)    --------->ATHB12   <---------YAB1                             --------->ANAC58                                     <- <---------ICU4                             --------->MYB52(1)                                  <---- --------->YAB1       <---------TOE2(3)    --------->TOE1(2)                                    <---- -GT1     <---------TOE1(3)    <---------DAG2 --------->ANAC58              --------->ATHB12    ----- -------->ICU4       --------->DAG2       --------->MYB46(3)              <----------DOF2      <----- ---------ATHB51    ---------->DOF2       <---------MYB52(2)              <---------DAG2   --------->MYB52(2) ---------ATHB12<---------YAB1 <----------DOF2--------->ANAC46       <----------DOF2    <---------GLK1(2)   caattatgatttagggttttgataaaggaaacacttttcttcaaacaaacgaaacacagaagcctaaaaaactttgctttattggattcagattagttac  27003600  Previous    Next  AGI:  At1g71790.1    Description:  F-actin capping protein beta subunit family protein. Identical to Probable F-actin-capping protein subunit beta [Arabidopsis Thaliana] (GB:Q9M9G7); similar to unnamed protein product [Vitis vinifera] (GB:CAO67546.1); contains InterPro domain F-actin capping protein, beta subunit; (InterPro:IPR001698) Range:  from: 27000471    to: 27002639    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g71800.1    Description:  cleavage stimulation factor, putative. similar to ESP1 (ENHANCED SILENCING PHENOTYPE 1) [Arabidopsis thaliana] (TAIR:AT1G73840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67553.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 27003114    to: 27006004    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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