Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <------------AtMYB77                     <-----------GT1               <---------ICU4                                                             <---------ARR11(1)        ----------->GT1<------------MYB.PH3(1)                               <---------ARR14(2)       --------->MYB59<---------At5g28300          <----------DOF2           --------->ARR14(2)     -       <---------TOE1(3)                 --------->YAB1            <---------AHL20(2)    <---------CCA1(2)       <---------TOE2(3)------->GAMYB   <---------ATHB12          --------->AHL20(2)   --------->YAB1   attagtagtaaggttaatctttgtaaccgtgtcttcttctaaatcataaacttctttttttgcttcaattttataagagtatttggctatcatatctata  26947800                                                                                     <---------AHL20(2)                                                         ----------->GT1        <---------AHL20(1)                                         <---------AHL20(2)                     --------->AHL20(2)                             --------->MYB52(2)    ---------->DOF2              <---------AHL20(2)                     <---------ANAC55(2) --------->AHL20(2)                  <---------AHL20(1)                     --------->O2       <---------AHL20(2)                   --------->AHL20(1)                     --------->ANAC55(2)--------->AHL20(2)                   --------->ARR11(3)                     <---------ANAC46   <---------AHL20(1) >>>>>>>>>GATA-1   <---------ARR11(3)    --             --------->YAB1  <---------MYB46(3) <---------TOE2(3)     <---------ANAC46            <-- ---------->GT1 <---------ICU4<-------GAMYB   ---------->DOF2       <---------MYB46(3)  <----------DOF2   gagagaaaattggtttgataactacgtgagtttgttgaataatttttttaaaggaaagatagataaatagtggtttgaatattttattttctttcatctt  26947900                                                   ----------->RAV1(1)                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC46                                       --------->YAB1                                     <---------AHL20(2)                                           ---                      --------->MYB52(2)  --------->YAB1                                    ---------                    <---------MYB52(1)<---------AHL20(2)                             --------->TOE1(3)        --------->ARR14(2)           --------->AHL20(2)                 --------->ANAC58    ---------        <---------ARR14(2)        <---------AHL20(2)                    --------->ANAC58    --------- ------->ZAT6    ---------->ID1   --------->AHL20(2)  --------------------->WRI1     --------->TOE2(3) -------YAB1    <-----------GT1 <---------YAB1---------->DOF2 --------->KAN4(2)----------------------   atcactatcgaatatgtttttcgttatttggattatttttttaataataaaagccacatttgtttattcgccctaagctatatttagccttagcacgaca  26948000                                                                                                    -                                                              --------->At4g35610                   <                                                              --------->LBD16                      <-                                                             ------->GAMYB                         --                                                            --------->MYB46(3)                     <-       ---------->DOF2         <-----------GT1             <---------At5g28300        ------>ZmHOX2a(1) ------------>AGL15        --------->ARR11(3)      --------->ANAC55(2)             ------>MYB83------ >ANAC58                   <---------ARR11(3)   --------->TOE1(2)                  ------>MYB46(1) -- >ANAC58               <---------MYB52(1)       --------->TOE2(2)    ----------->GT1  =============== >ANAC46              ----------------------->TaNAC69(2)  --------->MYB52(1)     --------->AtMYB61 -- ->TaNAC69(2)        <---------MYB46(3) <---------ANAC46  <-----------GT1  ---------->DOF2<----------DOF2   ctgaaaatagaaagagaccagagtcgttagattttacgagtgacttctaacttacgagattaaccgcagactggttcaaaagaccatcctcactttccta  26948100          --------->YAB1    --------->ANAC58    --------->ANAC46    --------->ANAC58 -------->CCA1(2) ------ZmHOX2a(2)                                                      <---------YAB1 --------ARR11(3)                                           <----------DOF2 ------->ARR11(3)                                           <---------DAG2 --------ARR14(2)                                        <---------ALFIN1      ---------->DOF2 >ZmHOX2a(1)                                          --------->ANAC46 ------>ZmHOX2a(1) ------->AGP1                   <-----------GT1    --------->MYB46(3) --------->TOE2(3) ======HOX2a_HOX2a       --------->ANAC46   <---------AHL20(2)       --------->YAB1      <----------ID1 ------->ARR14(2)   <----------DOF2         --------->AHL20(2)  ------------>CBF ----------->GT1   agatccaagtaatcaaaattcactttcactcaaatcacctctctatttaaacaacaacaccactttttcaatcctcattaacaaagttaaaaaaacaaaa  26948200                                                                                              <------                                                                          <-------TEIL   --------->AHL20(2)                     <-----------GT1                                 <---------AHL20(2)  <---------AHL20(2)            <---------DAG2                       *TSS                --------->AHL20(2)  <---------AHL20(1)            <----------DOF2               <----------DOF2        --------->AHL20(2)------>ZmHOX2a(1)   caacaccatcttcactttttttttttcttcttattttttgttttctttctctatacatattgtatcaaaaaataaatacattttcctgtattttattttt  26948300                                                                                  <---------------AGL15                                                                                  --------------->AGL15                                                                          <---------AHL20(1)                                                                          --------->AHL20(1)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                         --------->CCA1(1)                                            --------->At5g28300          --------->RVE1(1)                                         --------->At4g35610          <---------ICU4          <---------TOE2(3)         <-------TEIL                      <---------AHL20(2)         ---------->DOF2    --------->YAB1  --------->DOF5.7(2)      --------->AHL20(2)       <---------YAB1       <---------ICU4 ----------->GT1           <---------ATHB12             ---    --------->ICU4   --------->ANAC58  --------->ANAC46          <---------MYB59 <-----------------AGL1 ---AHL20(2)         --------->ANAC58--------->ANAC46          ------>NtERF2 <----------DOF2---------   tttgtgagtattaaagaaaacacaagacaagaatgacatacacagcggtaactatgctctctctctgcctaataaatatcttttcatcttatggcaaaga  26948400                                                                                                   --                                                                                                 <---                                                                         <---------DAG2          ----                                                              --------->ATHB12                   <---                <---------ANAC46      --------->YAB1         <---------YAB1                      <--- <---------ANAC46                  --------->WOX13(1)      <---------CCA1(2)  <-----------GT1    <--- ------>ALFIN1<---------ALFIN1   <---------YAB1          --------->YAB1  <----------DOF2      <------ ->DOF2      ----------->HVH21<-------TEIL        --------->TOE2(3)   <---------ALFIN1    <----------   gtgtcgagttttggcccgacttgtaatgtagtttcatcaatgagactcttaacattatatcatatcattgcctcactttattacattttttgtaacgtta  26948500                                                                                  ------->GAMYB    <---------MYB52(1)                                                           --------->MYB46(3)  <----------DOF2                --------->ANAC58                               --------->At4g35610 ------->ANAC46                  --------->ANAC58        <---------------------WRI1         --------- ------ANAC58          <---------AHL20(1)              ----------->TGA1       <---------WRKY12 ----->ANAC55(2)       <---------AHL20(2)            <---------ICU4         --------->ARR11(3)     <- ------ANAC58          --------->AHL20(2)         --------->YAB1    ---------->DOF2      --------->YAB1 ------ANAC55(2)       --------->AHL20(1)   --------->TOE2(3) <------ZmHOX2a(1)--------->MYB52(1) --- ------ANAC46         --------->AHL20(2)  --------->ARR11(3)  ======================HOX2a_HOX2a <---- ---MYB52(1)      <---------AHL20(2)     --------->CCA1(1)<---------ANAC46  <---------ARR11(3) ------ -GT1 --------->MYB52(2)<---------YAB1   --------->RVE1(1)<---------bZIP60(2)<------ZmHOX2a(2)-------   cgcgctgttagttctcttaattcattatattaagcatgccaaaataccttgatcagaatgacgaggagaacaaaggaagatcaacggacaataacaatca  26948600                                                                                                    -                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                            <------NtERF2                                                                                           <------MYB83                                                                                           <---------ATERF1(1)                                                                                           <------MYB46(1)                                                                                          <---------DEAR3(1)                               <---------At5g28300                                       <--------P <                            <-----------HVH21                                            ============ >WOX13(1)                 --------->ANAC46  --------->ANAC58                          <---------MYB46(3) ----------HVH21    <------MYB46(1)          --------->ANAC58   ------>NtERF2          --------->ATHB12 ------>DEAR3(1)    <------MYB83       --------->HSFB2a(2)      --------->LBD16 --------->ANAC58 ---- -----At5g28300     <---------MYB46(3) <---------HSFB2a(2)    <---------LBD16   --------->ANAC58----- --->YAB1       --------->ATHB12      --------->REM1(2)   <-----------GT1      <---------At5g28300<-- -->MYB46(3)   <---------YAB1----------->HVH21       ----------->GT1        <-----------HVH21<-------   ccgtcaaatggattacaacgattggttaccagtcacagcgtctagagaagccaaatggtattactccgccttccacaatgtcacggccatggttggcgcc  26948700  Previous    Next  AGI:  At1g71680.1    Description:  amino acid transmembrane transporter. similar to LHT2 (LYSINE HISTIDINE TRANSPORTER 2), amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G24400.1); similar to Os08g0127100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060901.1); similar to histidine amino acid transporter [Oryza sativa (indica cultivar-group)] (GB:CAD89802.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 26948249    to: 26950850    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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