Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                              <------                                --------->ANAC58                                             <------NtERF2                                --------->ANAC58                               --------->O2 ------>NtERF2                          ---------->DOF2                                 <---------ZAT18--------->ANAC58                       ------>NtERF2                                   <-----------RAV1(1) --------->ANAC46                       ----------->RAV1(1)                    <---------MYB46(3)         --------->ANAC58                      <---------ETT(1)                       <---------ANAC46  <---------O2--------->ANAC58                 ------->TEIL  --------->ZAT18       --------->ANAC46--------->ZAT14     --------->ANAC55(2) <---------GLK1(2)    ----------->HVH21           <---------REM1(2)  <---------At4g35610 <---------ANAC55(2) --------->ARR14(2) <---------ATERF1(1)  --------->ANAC58   <---------MYB52(1) <---------ANAC46  ---- <---------ARR14(2)--------->DEAR3(1)    --------->ANAC58  <-----------HVH21  <------NtERF2--------->ANAC58 >TOE2(3)     --------->ANAC46 <---------ZAT18   --------->AtLEC2    <---------ZAT14     --------->ANAC46   acaaattcgctcgtacacgagcctccgacaaagcacgcttatcaagcatccatacacagaccgtcgggtactgctgtggcctcgtggaatcacgcgcctt  26921000                                          ------>ZmHOX2a(2)                                          =============================HOX2a_HOX2a            <------                                         ==============================HOX2a_HOX2a            -------                                         <------ZmHOX2a(2)                                  ---------                                        --------->ARR14(2)                                 ------>ZmHOX2a(1)                                        <---------ARR14(2)                           --------->HSFC1(2)                                     --------->DEAR3(2)                             <---------ARR14(2)      <---------CCA1(2)              --------->MYB46(3)                             --------->ARR14(2)  <---------ANAC58                 --------->ARR14(2)                              <---------MYB52(1)  <---------ANAC58            --------->MYB52(1)                                   <---------CCA1(2)  <---------ANAC46           <-----------RAV1(2)                                  --------->LBD16 <-------TEIL             ======================HOX2a_HOX2a                      ----------->GT1<---- -------ZAT2    --------->STY1(2)  <---------ARR14(2)                            --------->ANAC55(2) ------>ZAT2   --------->ANAC58<---------LBD16                  ------>ZmHOX2a(1)--------->ANAC58 -------At4g35610         =======================HOX2a_HOX2a --------->ICU4      --------->ANAC58 ------>At4g35610         <------ZmHOX2a(1)             --------->ANAC58         --------->ANAC46 ----DOF2      --------->ANAC58<---------At4g35610      --------->ANAC58         <---------ANAC55(2) ----->MYB52(2)--------->ANAC46--------->At4g35610    <---------ANAC46        --------->PCF5<--------   agctgcgtatagcttccaagctagaccaggaccagcggaaccgatctgatcaagtagctcgtaatcctgaagagcctttggtcccgtaacttcctgtact  26921100                                                                                         <---------ATHB12                                                                                     ================                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                        --------->At4g35610                                        <---------ARR14(2)                        --------->ZAT14                                            --------->ARR14(2)      ------->TEIL      <---------ZAT2                                        <---------At4g35610     <-----------GT1    <---------At4g35610<---------ANAC58                   --------->At4g35610 ---ZAT14               --------->ZAT2     <---------ANAC58                   --------->ZAT2 -->ZAT14           --------->YAB1>>>>>>>ZML2                                 <---------ZAT2 >ZAT14            <---------ATHB12 <---------STY1(2)                        <-----------RAV1(1)    < -------RAV1(1)  --------->WOX13(1) --------->STY1(2)                     --------->ARR14(2)    ----- -ZAT14--------->DEAR3(2)     <---------RAP2.6(3)                   --------->ETT(2)=================   gtggtatgaaccgtcttctcaatcacagcagccgttctagctagagcttgagtaaatgttttcatgtttatcgacatttctgctggatccaattactcct  26921200           <------NtERF2          ------>NtERF2         --------->DEAR3(1)         <---------DEAR3(1)         ----------->HVH21        --------->RAP2.3(1)        --------->ATERF1(1)        <------NtERF2                      ------>ZmHOX2a(2)       <---------RAP2.3(1)                <------ZmHOX2a(2)       <---------ATERF1(1)               <---------ARR11(3)       <---------ERF1                    --------->ARR11(3)      <---------RAP2.3(3)               <---------GLK1(1)                        <------ZmHOX2a(2)      <---------DREB2C(2)          <---------O2                         --------->WRKY12      <---------DEAR3(1)           --------->O2                         ----------->HVH21      --------->ETT(1)             --------->TGA1a                     <---------WOX13(1)      <---------At1g77200          <---------TGA1a                --------->ANAC55(2)      <---------DEAR4(1)        ----------->HVH21                 <---------ANAC55(2)     <---------ORA47(1)         --------->TOE1(2)                 <---------ANAC58 ==HOX2a_HOX2a                 ------>ZmHOX2a(2)        =====================================HOX2a_HOX2a -----------RAV1(1)       --------->At5g28300           <------ZmHOX2a(2)  -------->ZAP1 ->ZmHOX2a(1)         --------->MYB52(1)--------->GLK1(1)         <---------ANAC58    <------ZmHOX2a(1) ==HOX2a_HOX2a ----------->GT1 --------->DEAR3(2)     --------->At4g35610<---------WRKY18(1)   aagtgttgtcggcgacgatgtaaaaaacggtgatccgacgagagatctcacaaatcagatcagagaatgcgtaattgaccgagatcgaggaagaagacga  26921300                                              --------->O2                                             ------>NtERF2                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                             <---------ARR14(2)                                        <----------DOF2                             <---------ARR14(3)                                      ---------->ID1                             --------->ARR14(3)                             ---------->ID1       <---                             <---------ARR11(3)                             <-----------GT1  --------                  <---------LBD16           <---------ALFIN1               <-----------GT1  <--------          --------->At4g35610--------->ARR14(2)             --------->HSFB2a(2)     <-----------GT1  --------->At4g35610        --------->ARR11(3)         <----------DOF2   *TSS <----------DOF2  -----  <---------At4g35610   ------>ZmHOX2a(2)  --------->MYB46(3)           <------------------------ANAC81   tggcagaagagaagctcaactctggatcgaagatcgtcttcttcccccacctctctctctttctgcaacttgttttttttcctttttttctttttttccc  26921400                                            <---------ANAC58          >>>>>>>>>MYB98   <-----------GT1               ----------------->AG  <---------ANAC58 ------MYB52(1)            <---------AHL20(2)     <----------DOF2 ----------->GT1          <---------ICU4 -->ID1                    --------->AHL20(2)------>ZmHOX2a(1)  ---------->DOF2     --------->ZAT6 ---GT1                   <---------AHL20(2)<---------ANAC58  <---------YAB1     <-----------GT1   <- ---->TOE2(3)       <----------DOF2   <---------ATHB12 <---------ANAC58   ----------->GT1 --------->ICU4   ttaattaacacattttcttatacttttatttatttgccaaatcagtccttgtctttgtcttgtgatgaaagtaacatagaaaattaccagtagtcattac  26921500          --------->ARR11(3)                                                                       <-          --------->GLK1(2)                                                                        --          <---------ARR11(3)                           <----------DOF2                            <--         <---------GLK1(2)     --------->ARR14(2) --------->GLK1(2)                              ----      --------->YAB1           <---------ARR14(2)<---------GLK1(2)                               ---- -----ZmHOX2a(1)     ----------->GT1       --------->YAB1      ---------->DOF2                  -----   aggagcaagaagaatctttgaaatggtgaaaccgattcgagtctctcataagaatctcttttcccaaaagcttagaagctaatttcatgaagttatggca  26921600          <---------ANAC58                                                             --------->ANAC58          <---------ANAC58                                                             --------->ANAC58         ------>ZmHOX2a(2)                                                             --------->ANAC46        <------ZmHOX2a(2)                                                            ---------->DOF2       --------->AGP1                                                                <---------DOF5.7(2)       --------->ARR11(3)                                                            --------->MYB52(1)       <---------ARR14(2)                                                        --------->ANAC58       --------->ARR14(2)                                                        --------->ANAC58       <---------ARR11(3)                                                   --------->LBD16       <---------GLK1(2)                                                   --------->ANAC46 --------ICU4                                                              ------->GAMYB ------->YAB1                            --------->ANAC58               --------->ARR14(2) -------ATHB12                           --------->ANAC58               <---------ARR14(2) ----->ANAC58                            --------->ANAC46               --------->MYB52(1) ----->ANAC58            --------->GLK1(2)       <---------ATHB12 --------->ANAC46 --------->DOF5.7(2) ---->WOX13(1)       --------->YAB1    <-----------GT1     <-----------GT1 --------->RAP2.6(2)   atcaatacagatccttgtgttcttcataatctgtatcaaattcacaccacaatcactcgattttcttccctccataaccgcaaacgctaacgcaagtttc  26921700                                                           --------->bZIP60(1)                                                           <---------bZIP60(1)                 <---------ARR11(3)                     --------->WRKY12                 <-----------GT1                        ----------->HVH21                 --------->ARR11(3)                   --------->ZAT2     --------->ANAC55(2)            <---------AHL20(1)                        --------->At4g35610<---------ANAC55(2)        <            --------->AHL20(1)                        <---------ZAT2     --------->ANAC58       <----            <---------AHL20(2)                        <---------At4g35610--------->ANAC58      ------            --------->AHL20(2)                <---------ANAC58      --------->HSFB2a(2)        ------      <---------bZIP60(1)                     <---------ANAC58      <---------HSFC1(1)       ------->GAMYB      <---------TGA2(1)    ------>ZmHOX2a(1)--------->ARR11(3)      --------->HSFC1(1)      ---------      ----------->GT1   ------>ZmHOX2a(1)  <---------CCA1(2)        <---------HSFB2a(2)   <----------      --------->bZIP60(1)----------->RAV1(2)<---------ARR11(3)     <---------LBD16     <----------DOF2   tcgctgtgatgtaataaattatcttcctcctgttcttcgtcttctatatcttgtgaagctgacctcatttctggaacgtaacccatctcctttaaccaac  26921800                                      <---------SPL7                                      ----------->HVH21                                      --------->LBD16                                     <---------HSFB2a(2)                                  <---------WRKY18(1)                                  ------------------>SPL14                               <------------------SPL14                               <---------ANAC58                               <---------ANAC58                   <---------ANAC58 ---------ATHB12        <---------RAP2.6(2)                       <---------ANAC58 -----MYB52(2)          --------->ANAC46                          <---------ANAC46 >MYB83              <---------ZAT14 --------->HSFB2a(2)       --------->ARR14(2)             <------ >MYB46(1)           --------->ZAT14<---------LBD16 ------>ZmHOX2a(1)             <---------CCA1(2) >MYB46(3)           --------->ARR14(2)  <---------DEAR3(1)    <---------ARR14(2) ------>ZmHOX2a(1) -GT1                <---------ARR14(2) --------->SPL7 --------->LBD16 ------->TEIL           -------   taatcagtctcttcaattctctgtatacggcttccttgtccggacggtgtcttcctcccgatgcgaattcgtgaaccttgtttcctatctctgtccagct  26921900  Previous    Next  AGI:  At1g71410.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G22870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44578.1); similar to hypothetical protein OsJ_002516 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12691.1); similar to hypothetical protein OsI_002814 [Oryza sativa (indica cultivar-group)] (GB:EAY74967.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 26916388    to: 26921374    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g71420.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G09950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44556.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 26921484    to: 26923761    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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