Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->AHL20(2)                    --------->AHL20(2)              <---------ANAC58              --------->ANAC55(2)  <---------TOE1(2) <---------AHL20(2) ----NtERF2   <---------ANAC55(2)                                              ----------->GT1 ->ANAC58     <---------ANAC58                                  --------->At4g35610  --------->DAG2 ->ANAC58--------------->AtSPL8  <-------MYC3             --------->TOE1(2)  <---------At5g28300 >RAP2.6(3)  ------->TEIL        ------->MYC3     <---------MYB46(3)   <---------TOE2(3)       ------ ---AtSPL3   <-------TEIL  <-----------GT1  <<<<<<<<<<<<<<<<<LFY<---------At4g35610 ---------->DOF2 <   atcgaaggaactatgtacgtgataaatttataccacgttttgctatgaacaatggttcaacatgggagctatataggtttacagtgaaaagtgactctgt  26858700                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                                <---------GLK1(1)                                                --------->GLK1(1)                                               <---------ARR14(2)                                               --------->ARR11(3)                                               <---------AGP1                                               --------->ARR14(2)                                              <------ZmHOX2a(1)                                         --------->ALFIN1                                         <---------AtMYB61     <---------YAB1  --------->ATHB12                                       <---------ANAC58        --------->ICU4 <---------YAB1      --------->ZAT6                   <---------ANAC58 <----------DOF2     --------->YAB1      <-----------GT1                  <---------ANAC46<---------DAG2      --------->ICU4 <----------DOF2                <----------DOF2<---------ARR11(3)          <---------YAB1 --->ZAT14                     <---------ANAC58--------->GLK1(2)  <---------YAB1 ---------DAG2                 <---------ANAC58<-----------ARR10--------->YAB1--------->ICU4       <-   agcctttttcactatggaatatcgcaaacccttgcttcttggggtggaggatctcagcctttttgatgatgatgttgatgatgattcgcattcgaataag  26858800                                           ------>ZmHOX2a(2)                                           ====================================HOX2a_HOX2a                                          <------ZmHOX2a(2)                                          =====================================HOX2a_HOX2a                                         <---------ARR14(3)                                         --------->AGP1                                         <---------ARR14(2)                                         --------->ARR14(3)                                         --------->ARR14(2)                                         <---------ARR11(3)                                --------->TOE2(3)                                         --------->ARR11(3)                       --------->ARR11(3)                                        --------->RVE1(1)                       <---------TOE2(3)       <---------ALFIN1              ---------->DOF2                    ------>ZmHOX2a(1)------->TEIL -----ZmHOX2a(1)                ----------->HVH21              --------->LBD16  <---------YAB1      <   aggaaaactccaccttgttctgagagcaagagaactgacaaaagatcttcatatggacatgtttccgagtattcctctaaataagattatggaccttaat  26858900                          ----------->HVH21                                                         <                        <---------ANAC46                                  ----------->GT1      <-----                        <---------ANAC58                             --------->YAB1         <------ZmHOX2a(1)                     <---------MYB52(1)                    --------->AHL20(2)             <---------TOE1(3)         <----------DOF2<---------ANAC58                   --------->AHL20(1)             --------->ANAC55(2)        <---------DAG2<---------ANAC46                     <---------AHL20(2)             <---------TOE2(3)     <-----------GT1<-------GAMYB        --------->ANAC58 --------->AHL20(2)         <---------ZAT6-- ---------TOE2(3)  <-----------RAV1(1)   --------->ANAC58 <---------AHL20(2)   <---------AHL20(2)  <-   ttgatgtttaccttttattttctgttgtgtgacacaaatttgtaggcaaatgggaatgaattaaattggaataatacagaaaaaattgtgttaaggaatc  26859000                                                          --------->AHL20(2)                                                          --------->ATHB51                                                          <---------AHL20(2)                *TSS                                                          <--------ATHB1                  <---------ANAC46                                                          <---------ICU4               <---------AtMYB61                                                         <---------ATHB51              <---------DEAR3(1)                                                         --------->ICU4           --------->DAG2                                                     ------------>CBF            ---------->DOF2 ---------DDF1                                      --------->ANAC58     ------>MYB83  --------->ALFIN1 ----HSFB2a(1)             ---------->DOF2        ---------->DOF2       ----------->RAV1(1) --------- ------->ETT(2) <---------AHL20(2)          ------->TEIL <---------ATHB12------>MYB46(1)<------MYB83 --------ETT(2) --------->AHL20(2)  ---------->DOF2 --------->ANAC58   --------->AtMYB61<------MYB46(1)   gtcgacatggtttgatatttatttgagaataaagacacaaaagatgaaactagaaagcaataatttagtaagaccaacaaaaaaaaagggtggtgttttg  26859100           <----------DOF2     --------->ANAC58     --------->ANAC58                                <------NtERF2     --------->ANAC46                              <---------ANAC46    --------->SPL7       <----------DOF2----------->RAV1(1)               --------->ICU4  <---------SPL7    ---------->DOF2   <---------At4g35610      <------NtERF2               <---------HSFB2a(2) -------------->TaNAC69(2)            --------->At4g35610    <---------DEAR3(1)            --------->HSFB2a(2)   ctattgtacgcctctttctctccaaagctttttttttttcagctacagaaatggcgcagagagtcggagcattgaaaagattgaaactttcttctgcaac  26859200                                                             --------->LBD16         ------>ZmHOX2a(1)                                  <---------HSFB2a(2)     <-----------GT1                           <---------At4g35610  --------->ARR11(3)              <---------ANAC58          --------->HSFB2a(2)  <---------ARR11(3)              <---------ANAC58         <---------LBD16  <---------ARR14(2)    <---------YAB1        <---------DEAR3(1)                   --------->ANAC58  --------->ARR14(2) <---------MYB52(1)       --------->ANAC46                     --------->ANAC58  <---------GLK1(2) <-------GAMYB <---------ANAC46    <----------DOF2            ---------->DOF2   <-   tccagattttcctattggtttccgttgtgatggagttcgtgttcatcgacgctgctctttctccagaaattgtgcttctaatcgaaagccaagactccga  26859300                                                                                              <------                                                                                              -------                                                                                              -------                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                                                           <---------ZAT2                                               <---------HSFC1(2)                          --------->ZAT2                                               --------->HSFC1(2)                        --------->MYB46(3)                                       --------->ANAC46                        <---------ARR11(3)        --------->At4g35610            --------->ANAC58                        --------->ARR11(3)    <---------ANAC46                   --------->ANAC58        <---------ARR14(2)     ----------->HVH21 ----------RAV1(1)              <---------ETT(2)        ------>ZmHOX2a(1)<---------HSFB2a(2)  <------   attgttgctcagaagaaatggaaattgaacgatatcgacacaagtaagacccttcttcctcttcgaattctggttcttgaagttctctgtaacagctgct  26859400                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                      <-----------GT1                                                                                   --------->bZIP60(1)       <------MYB83                                      <------NtERF2             ----------->GT1       <------MYB46(1)                                 --------->ALFIN1            <---------TGA2(1)      <---------AtMYB61                              <---------ANAC58              --------->TGA2(1)   <-----------RAV1(1)                               <------MYB83                  <---------REM1(1)   <---------YAB1                                    <------MYB46(1)               <---------bZIP60(1) ---ZAT2                    <---------------AtSPL8   <---------ANAC58       <---------YAB1 -->At4g35610            --------->ARR11(3)         <---------MYB46(3)   --------->GLK1(2) -->ZAT2                <---------At4g35610         --------->MYB55(2) --------->HSFB2a(1) ---At4g35610      ----------->HVH21               --------->ALFIN1    <---------HSFB2a(1)   gagttatgttggtgttcttatatgacagatgttgtacaagaacgatttagtcagtgggtgtcgaaatcacagaaaattctgagtgatgtaacatctccat  26859500                                                <---------GLK1(2)                                                <---------ARR11(3)                                        <------ZmHOX2a(2)                                        ================================HOX2a_HOX2a                                =============HOX2a_HOX2a                              <---------ARR11(3)--------->ARR11(3)                              --------->ARR11(3)<---------ARR14(3)                           <---------WOX13(1)   --------->ARR14(3)--------->ARR14(2)              <---------GLK1(2) ------>ZmHOX2a(2)                 <---------ARR14(2)    ---------->DOF2   ---------->DOF2 <------ZmHOX2a(1)          <------ZmHOX2a(1)   --------->MYB52(1)   tgaagaaaaagagtcagagtctcaaaaagattgatcttgaggatcaacaagattttgaagacttggaggaacttcttacagttgaacaaactgttcgaag  26859600  Previous    Next  AGI:  At1g71235.1    Description:  unknown protein Range:  from: 26858221    to: 26858884    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g71240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48840.1); similar to Os01g0869000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044923.1); similar to hypothetical protein OsJ_004118 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14293.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24748.1); contains InterPro domain Protein of unknown function DUF639 (InterPro:IPR006927) Range:  from: 26859092    to: 26863403    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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