Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------AHL25(3)                       --------->AHL12(3)                       --------->AHL20(3)                       <---------AHL12(3)                       <---------AHL20(3)                       --------->AHL20(2)                      <---------AHL12(2)                      --------->AHL12(2)                     --------->AHL20(3)                     <---------AHL12(3)                     <---------AHL20(3)                    --------->AHL25(3)                    --------->AHL12(1)                    <---------AHL20(2)                    <---------AHL12(1)              <---------ANAC58              --------->ANAC55(2)  <---------TOE1(2) --------->AHL20(2) ----NtERF2   <---------ANAC58                                                 ----------->GT1 ->ANAC58     <---------ANAC55(2)                               <---------At4g35610  --------->DAG2 ->ANAC58--------------->AtSPL8  <-------MYC3             --------->TOE1(2)  <---------At5g28300    < >RAP2.6(3)  ------->TEIL        ------->MYC3     <---------MYB46(3)   <---------TOE2(3)       ------ ---AtSPL3   <-------TEIL  <-----------GT1  <<<<<<<<<<<<<<<<<LFY--------->At4g35610 ---------->DOF2 <   atcgaaggaactatgtacgtgataaatttataccacgttttgctatgaacaatggttcaacatgggagctatataggtttacagtgaaaagtgactctgt  26858700                                                        <---------DOF5.7(1)                                                 ------>ZmHOX2a(2)                                                <---------GLK1(1)                                                <------ZmHOX2a(2)                                                --------->GLK1(1)                                               --------->GLK1(2)                                               <---------AGP1                                               <---------ARR11(3)                                               --------->ARR14(2)                                               --------->ARR11(3)                                               --------->ARR11(2)                                               <---------ARR11(2)                                               <-----------ARR10               --------->KAN1                                               --------->RVE1(2)               --------->ATHB12                                              <------ZmHOX2a(1)             --------->YAB1      <-----------GT1                    --------->ALFIN1       --------->YAB1 --------->YAB5      --------->ZAT6                     <---------AtMYB61      --------->YAB5<---------YAB1  <---------DOF5.7(1)                  <---------ANAC58 <----------DOF2     --------->YAB5 <----------DOF2                       <---------ANAC46<---------DOF5.7(1) <---------YAB1 <---------DOF5.7(1)            <----------DOF2<---------ARR14(2) <---------YAB1     --------->KAN1 ---------DOF5.7(1)            <---------ANAC58<---------GATA12<---------YAB1 --------->ICU4       <- --->ZAT14       --------->RVE1(2)     <---------ANAC58<---------DAG2      --------->ICU4      ------ ---------DAG2  <---------KAN1 <---------ANAC58--------->GATA12--------->ICU4 <---------YAB5 <-------   agcctttttcactatggaatatcgcaaacccttgcttcttggggtggaggatctcagcctttttgatgatgatgttgatgatgattcgcattcgaataag  26858800                                           ------>ZmHOX2a(2)                                           ====================================HOX2a_HOX2a                                          =====================================HOX2a_HOX2a                                          <------ZmHOX2a(2)                                         --------->ARR11(3)                                         --------->GATA12                                         <---------ARR14(2)                                         <---------GATA12                                         <---------ARR11(3)                                         --------->ARR14(2)                                         --------->AGP1                                         --------->ARR14(3)                                         <---------RVE1(2)              ------>ZmHOX2a(1)      <-----                                         <---------ARR14(3)       <---------KAN1           --------->TOE2(3)                                        --------->RVE1(1)         --------->KAN1         ------->TEIL -----ZmHOX2a(1)                       --------->DOF5.7(1)     --------->LBD16    --------->ARR11(3) --->DOF5.7(1)                       ---------->DOF2       <---------ARR11(2)   <---------YAB1 ------ --KAN1<---------ALFIN1         ----------->HVH21          --------->ARR11(2)   <---------TOE2(3)   <   aggaaaactccaccttgttctgagagcaagagaactgacaaaagatcttcatatggacatgtttccgagtattcctctaaataagattatggaccttaat  26858900                                                                     --------->YAB1                                                             <---------WOX13(2)                                                             --------->WOX13(2)                                                           --------->AHL20(2)                                                           --------->AHL20(1)                                                           --------->AHL25(2)                                                           --------->AHL25(1)                                                           <---------AHL25(1)                                                           <---------AHL25(2)                                                           <---------AHL20(2)                  <-----                                                           <---------AHL20(3)                  <-----                                                           <---------AHL25(3)               <------ZmHOX2a(1)                                                          <---------AHL25(3)              <---------TOE2(3)                                                          --------->AHL25(3)              --------->ANAC55(2)                                                          <---------AHL20(2)   --------->AHL12(1)                          ----------->HVH21               <---------AHL25(1)   <---------AHL20(3)         <---------DOF5.7(1)                              <---------AHL25(2)   <---------AHL12(1)         <----------DOF2<---------ANAC46                  --------->AHL20(2)   <---------AHL20(2)        <---------DAG2  <---------ANAC58                  --------->AHL25(1)   <---------AHL25(1)     <-----------GT1    <---------ANAC58                --------->WOX13(2)     --------->AHL25(1)  --------->YAB5      <---------ANAC46                  <---------WOX13(2)----------->GT1 <---------TOE1(3) ----WOX13(2)        <---------MYB52(1)              <---------KAN1 <---------KAN1   <---------ZAT6 < --->WOX13(2)       <-------GAMYB        --------->ANAC58 <---------AHL12(3)   --------->AHL25(2)  -- ---------TOE2(3)  <-----------RAV1(1)   --------->ANAC58 --------->AHL12(3)   <---------AHL25(2)  <-   ttgatgtttaccttttattttctgttgtgtgacacaaatttgtaggcaaatgggaatgaattaaattggaataatacagaaaaaattgtgttaaggaatc  26859000                                                           <---------AHL12(2)                                                           --------->WOX13(2)                                                           <---------WOX13(2)                                                          --------->AHL20(3)                                                          <--------ATHB1                                                          --------->AHL12(1)                                                          <---------ICU4                                                          <---------AHL25(3)                                                          <---------AHL12(1)                ---------                                                          <---------AHL25(2)              <---------ANAC46                           ---------->DOF2                --------->AHL20(2)           --------->ALFIN1                          <---------KAN1                  --------->ATHB51             <---------DEAR3(1)                <---------AHL25(1)                        <---------AHL20(2)        --------->DOF5.7(1)                <---------AHL25(3)                        --------->AHL25(1)       --------->DOF5.7(1)                <---------AHL20(2)                        --------->AHL25(2)      --------->DOF5.7(1)                --------->AHL25(1)                       <---------ATHB12         --------->DAG2              --------->AHL12(2)                         <---------ATHB51        --------->DOF5.7(1)              <---------AHL12(3)                     ------------>CBF            ---------->DOF2 ----HSFB2a(1)--------->AHL12(3)                    --------->ANAC58     ------>MYB83  <---------AtMYB61 ----YAB5  <---------RVE1(2)                      ---------->DOF2        ------>MYB46(1)<------MYB46(1) ---------DDF1<---------AHL12(2)            ------->TEIL --------->ICU4 ----------->RAV1(1) *TSS <--- ------->ETT(2) --------->AHL20(2)    --------->DOF5.7(1)--------->AHL25(3)     --------->DOF5.7(1) --------ETT(2)--------->AHL25(3)   ---------->DOF2 --------->ANAC58   --------->AtMYB61<------MYB83   gtcgacatggtttgatatttatttgagaataaagacacaaaagatgaaactagaaagcaataatttagtaagaccaacaaaaaaaaagggtggtgttttg  26859100           <----------DOF2          <---------DOF5.7(1)         <---------DOF5.7(1)     --------->ANAC58     --------->ANAC58     --------->ANAC46                                <------NtERF2    --------->SPL7(1)                 <---------At4g35610                 --------->ICU4  <---------SPL7(1)      <----------DOF2----------->RAV1(1)    <------NtERF2               --------->HSFB2a(2) -------------->TaNAC69(2)<---------DOF5.7(1)      <---------ANAC46       --------->DOF5.7(1) ------RVE1(2)      ---------->DOF2   --------->At4g35610    <---------DEAR3(1)            <---------HSFB2a(2)   ctattgtacgcctctttctctccaaagctttttttttttcagctacagaaatggcgcagagagtcggagcattgaaaagattgaaactttcttctgcaac  26859200                --------->ARR11(2)                <---------ARR11(2)         ------>ZmHOX2a(1)     <-----------GT1                                         --------->LBD16  --------->GATA12                                          --------->HSFB2a(2)  --------->ARR14(2)                                        <---------HSFB2a(2)  --------->ARR11(3)                           <---------At4g35610  <---------ARR11(3)              <---------ANAC58         <---------LBD16  <---------GATA12                <---------ANAC46    <----------DOF2  <---------RVE1(2)     <---------YAB1        --------->ANAC46                     --------->ANAC58  <---------GLK1(2)  <---------MYB52(1)       <---------DEAR3(1)                   --------->ANAC58  <---------ARR14(2)<-------GAMYB <---------ANAC58   <---------DOF5.7(1)         ---------->DOF2   <-   tccagattttcctattggtttccgttgtgatggagttcgtgttcatcgacgctgctctttctccagaaattgtgcttctaatcgaaagccaagactccga  26859300                                                                                              <------                                                                                              -------                                                                                              -------                                                                                           --------->At4g35610                                                  <---------DOF5.7(1)                      <---------At4g35610                                               <---------HSFC1(2)                          --------->ZAT2                                               --------->HSFC1(2)                          <---------ZAT2                                           --------->DOF5.7(1)                           --------->MYB46(3)                                       --------->ANAC58                        <---------ARR11(3)        --------->At4g35610            --------->ANAC58        <---------ARR14(2)     ----------->HVH21    <---------ANAC46            <---------ETT(2)<---------DOF5.7(1)            --------->ARR11(3) ----------RAV1(1)  <---------WOX13(2) --------->ANAC46 ------>ZmHOX2a(1)<---------HSFB2a(2)  <------   attgttgctcagaagaaatggaaattgaacgatatcgacacaagtaagacccttcttcctcttcgaattctggttcttgaagttctctgtaacagctgct  26859400                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                                                                                      <-----------GT1                                                         <------NtERF2             ----------->GT1       <------MYB83                                    --------->ALFIN1            <---------REM1(1)       <------MYB46(1)                               <---------ANAC58              <---------bZIP60(1)      <---------AtMYB61                              <------MYB46(1)               --------->TGA2(1)   <---------YAB1                                    <------MYB83                  <---------TGA2(1)   <-----------RAV1(1)                               <---------ANAC58              --------->bZIP60(1) ---ZAT2                    <---------------AtSPL8  --------->MYB55(2)      <---------YAB1 -->ZAT2                 --------->ARR11(3)         <---------MYB46(3)   --------->GLK1(2) -->At4g35610           <---------At4g35610        --------->ALFIN1    --------->HSFB2a(1) ---At4g35610      ----------->HVH21           <---------YAB5          <---------HSFB2a(1)   gagttatgttggtgttcttatatgacagatgttgtacaagaacgatttagtcagtgggtgtcgaaatcacagaaaattctgagtgatgtaacatctccat  26859500                                        ================================HOX2a_HOX2a                                        <------ZmHOX2a(2)                                       --------->ARR11(2)                                       <---------GATA12                                       --------->RVE1(2)                                       <---------ARR11(2)                                       --------->GATA12                                ------>ZmHOX2a(2)                              <---------ARR11(3)<---------GLK1(2)                              <---------RVE1(2) --------->ARR11(3)                              --------->ARR11(3)<---------ARR11(3)              <---------GLK1(2) =============HOX2a_HOX2a      --------->DOF5.7(1)  <---------WOX13(1)   <---------ARR14(3)<---------ARR14(2)    --------->DOF5.7(1) --------->DOF5.7(1)     --------->ARR14(3)--------->ARR14(2)    ---------->DOF2   ---------->DOF2 <------ZmHOX2a(1)          <------ZmHOX2a(1)   --------->MYB52(1)   tgaagaaaaagagtcagagtctcaaaaagattgatcttgaggatcaacaagattttgaagacttggaggaacttcttacagttgaacaaactgttcgaag  26859600  Previous    Next  AGI:  At1g71235.1    Description:  unknown protein Range:  from: 26858221    to: 26858884    Orientation: Forward Links:  TAIR  MIPS  AIP    AGI:  At1g71240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G48840.1); similar to Os01g0869000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044923.1); similar to hypothetical protein OsJ_004118 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14293.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24748.1); contains InterPro domain Protein of unknown function DUF639 (InterPro:IPR006927) Range:  from: 26859092    to: 26863403    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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