Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ANAC58             <---------ANAC46             <---------ANAC58             --------->TGA1a             <---------O2             --------->O2                                                  --------->YAB1             <---------TGA1a                                            --------->GLK1(1)            <-------MYC3                                                <---------GLK1(1)            ------->MYC3                                               <---------ARR14(2)            <-------MYC2                                               <---------ARR11(3)            ------->MYC2                 --------->At4g35610           --------->ARR14(2)           --------->ANAC58             --------->DEAR3(1)            <------ZmHOX2a(1)           --------->ANAC58           --------->At4g35610         ------->GAMYB                  ----   --------->DAG2                     --------->ZAT2           --------->MYB52(1)                <---  =====================bZIP_DOF ----------->HVH21     --------->GLK1(2)--------->ARR11(3) ---------->DOF2  ---------->DOF2          <-----------RAV1(2) <---------ATHB12----------->RAV1(1)  --------->ALFIN1-   catgaaaagtagcacgcgtgtgatgaaacccaggctgacgagcagcccaatcgaagaatttgagacaacagaggatatcgtaacgagtgtgtgaaagcac  26844800                                                                                                    -        ------->TEIL                                ---------->DOF2                                 -   <------ZmHOX2a(1)                          ----------->GT1                     --------->ZAT2    < --->PIF5                               --------->ALFIN1                          --------->At4g35610 ----PIF5                               <---------AtMYB61                       <------ZmHOX2a(1)   < -------->HSFB2a(2)           <------NtERF2--------->ALFIN1             --------->TOE2(3) <------ZmHOX2a(1)   gtcgaggacgaatttctcagtgagacgaagtcggagattggagaggtggagataaaaagctctatcgtctccatcgttagaaggagctcgaaggatgtca  26844900            --------->ATHB12                                             <---------GLK1(1)           <---------AHL20(2)                                            --------->GLK1(1)           --------->AHL20(2)                                          <------ZmHOX2a(1)  <-------TEIL<---------WOX13(1)                                   <---------TOE2(1) --------->ARR14(1)                                                <---------TOE1(1) --------->CCA1(2)                                             --------->ANAC58 -------->ARR14(2)                                             --------->ANAC58 --------->LBD16 -------->ARR11(1)           <-----------GT1                   --------->ANAC46<---------LBD16     -- ---------GLK1(2)   <------NtERF2                             <---------LBD16  <---------HSFB2a(2) <- ---------ARR14(2) <---------MYB46(3)                   ----------------->AGL1<---------LBD16 >>>>>>>   aagattcgatcgattaattggtggctctgtttcacatctcgatgcttaaaccagtctttccattcacggacgaggaaatctccgggagcgattgaagaag  26845000                                          --------->HSFB2a(2)                                          <---------HSFB2a(2)                                         <---------LBD16                                            -                                        --------->MYB52(1)                                          <                                  <-------GAMYB                                                  <---                                <------NtERF2                                                    ====                 --------->MYB52(1)    <-----------GT1                                     ----------         <---------TOE1(3)     ------>NtERF2                                              --------->LBD16    <---------ANAC55(2)       <---------DEAR3(1)                                          ------>NtERF2    <---------ANAC46          --------->DEAR3(1)                                         <---------ALFIN1    <---------ANAC58         --------->ATERF1(1)                                         --------->DEAR3(1)    <---------ANAC58       <---------ANAC58      ---------->DOF2 ------>NtERF2         ============== ------->HSFB2a(1) --------->ANAC58 <---------MYB46(3)          --------->DEAR3(1)     ------>ZmHOX2a(1) --------HSFB2a(1) --------->ANAC58<---------MYB52(1) --------->GLK1(2)            --------->ARR14(2) >>TBF1  <---------TOE2(3) <---------ANAC58--------->LBD16      <---------DEAR3(1) <---------ARR14(2)   aaggtttcgtgaaggtagagaacggaatagcgtcgccgttgttaccggaagtaaagtttctgaacgacgacgcagagagcgatagtatcctccgcctgag  26845100                                                                                                 ====                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                              -------                                                                                              -------                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                            ---------                                                                                           <---------PCF2                                                                                           <---------ANAC58                                            <---------HSFB2a(1)                            <---------ANAC58                                            --------->HSFC1(2)                             <---------RAP2.6(2)                              ----------->HVH21                                            --------->DEAR3(1)                         --------->At5g28300--------->HSFB2a(1)                            <---------ANAC46                       <---------DEAR3(1)   <---------HSFC1(2)                            --------->ATERF1(1)                    ----------->HVH21   --------->DEAR3(1)                               <---------ATERF1(1)                ------>ZmHOX2a(2)    <---------ALFIN1                                   --------->ALFIN1              --------->ARR11(3)    -------->P                                       --------->ATHB12           <---------TOE1(2) <---------WOX13(1)                                     <---------ATHB12 -------->HSFB2a(1) <---------ETT(2)------>MYB83                                   ------>MYB83<----- ---------HSFB2a(1) --------->ETT(2)------>MYB46(1)                                ------>MYB46(1)<-- ---ZmHOX2a(1)<---------ARR11(3) --------->MYB46(3)                               --------->WOX13(1) ======================HOX2a_HOX2a ----------->RAV1(1)                          --------->MYB46(3)<-- ->RAV1(2)<---------AtLEC2--------->WRKY38(1)                                   ------------>CBF<---- ======================HOX2a_HOX2a--------->AtMYB61 *TSS ----------->GT1      <-----------GT1<------NtERF2   gagcattccttcgcatgatctctcgacggtgactgaccaacaccgaagcatccaaaaactcgaaaaaccctagcatttttcaaccaatcagtggcgccca  26845200 ============================bZIP_DOF ----->ANAC46 ----->bZIP60(2) ------O2 ----->bZIP60(1) ----->TGA1a ----->O2 ----->ANAC58 ----->ANAC58 ----->ANAC55(1) ------TGA1a                                                                 <---------ZAT2 -->RAP2.3(3)             --------->TOE2(3)                                 --------->LBD16 -->DEAR3(1)      <----------DOF2                                          --------->ANAC46 ->ATERF1(1)     <---------ANAC58                                         <---------LBD16 -ZAT18     <---------ANAC46                                   <---------CCA1(1)      <---------MYB52(1) -RAP2.3(1) <---------O2------->TEIL                           <---------RVE1(1)     <-------GAMYB -ATERF1(1) <---------bZIP60(2)                               --------->ARR11(3)    <---------MYB46(3) >PCF2    <-----------HVH21<---------MYB52(1)------>ZmHOX2a(1)<---------ARR11(3)    --------->MYB52(2) ----ALFIN1 <---------ANAC58    <-----------GT1              <------ZmHOX2a(1)     <---------TOE1(2) ---------TGA1   <---------ANAC46            <----------DOF2----------->GT1--------->LBD16 ---------HVH21  <---------ANAC58 --------->ANAC46         <---------TOE2(3)------>NtERF2   *TSS  <-- -------STF1<---------ANAC58 --------->MYB52(2)    <---------ZAT6 <-----------GT1 <---------MYB52(1)   cgtcatactcgatgtcgtggcttttgtacgttatttacgaaaatgtccttttagtgttagtaaggatatttcgattcccggctcgttcgttactggtttt  26845300                                                                                           <---------DOF5.7(2)                                                                                          <---------WRKY38(1)                                                                                          <---------WRKY12                                                                                         --------->DOF5.7(2)                                                                                         <------NtERF2                                             --------->AGP1                             ------>NtERF2                                             <---------ARR14(3)                         <-----------HVH21                                             --------->ARR14(3)                       --------->ATERF1(1)                                             <---------ARR14(2)                       <------NtERF2                                      ------>MYB46(1)                                 --------->RAP2.3(1)                                      ------>MYB83                                   <---------DEAR3(2)                                     --------->WOX13(1)                              <---------RAP2.3(1)                                    --------->AtMYB61                                <---------ORA47(2)                                 --------->AtMYB61                                   <---------ATERF1(1)                                --------->MYB46(3)                                   ------>NtERF2                       --------->ALFIN1      <---------ARR11(3)                     <---------DEAR3(1)                  ---------->DOF2<---------ALFIN1       ------->TEIL               <------NtERF2              <---------ANAC46<---------ALFIN1<------ZmHOX2a(2)                    --------->ATERF1(1)              <------NtERF2<---------TCP16(1)--------->ARR14(2)                   <---------SPL7          <-----------HVH21--------->PCF2    --------->ARR11(3)                   <---------ATERF1(1)         --------->ANAC46  <---------PCF5   --------->GLK1(1)                    <---------DEAR3(1)  <<<<<<<<<TBF1--------->LBD16--------->AtMYB61        <---------CCA1(2)        <------NtERF2 ------- ---------GT1<---------LBD16 --------->MYB46(3)------>ZmHOX2a(2)              <---------DEAR3(1)    <   tttcttcttctccgtcgcggaaaagatggggaccaccaccaatctgagatcttggctgtatctcattcttctcttcatcgtcgtcgtcggcgtcaacgct  26845400                              <-------GAMYB                             <---------MYB46(3)                            <---------ANAC46                          <---------MYB46(3)                       --------->ZAT2                       <---------O2                       <---------At4g35610       --------->ZAT14                <---------KAN4(2) <---------TOE2(3)     ------>ZmHOX2a(1)          --------->TOE1(2)<------NtERF2         <---------ZAT18 --------->ARR14(2)    --------->At4g35610     --------------->AtSPL8                      <--------- --------->GLK1(2)   <-----------RAV1(2)       <------NtERF2                               <---------DAG2 >GAMYB--------->GLK1(1) --------->ALFIN1    <-----------RAV1(2)              --------->ICU4 ---------GLK1(2)--------->KAN4(1)<---------TOE1(3)  XXXXXXXXXXXXXXXXXXXX>MIR847        <-----------GT1   cagaatcggagacctaagaatgttcaggtggctgttaaggctaagtggcagggtactcctcttctccttgaggctgggtaatgcttcttcttactttttt  26845500                             --------->ARR14(2)                             --------->GLK1(2)                             <---------ARR14(2)                                                   <--                        <---------At4g35610                                                       ---                   ------>ZmHOX2a(2)                                                       --------->HSFB2a(2)                 <---------ARR11(3)    <---------YAB1       <-------GAMYB  --------->GLK1(2)      ---                 --------->ARR11(3)<---------WOX13(1)       <---------At4g35610            <---------HSFB2a(2)    ----------->RAV1(1) --------->At4g35610        <---------YAB1<---------GLK1(1)        <---------LBD16 -DOF2      <-----------GT1  ------->TEIL  <-----------RAV1(1)   --------->GLK1(1)    <---------MYB46(3)   gtcgagcaccattgttactgatcttaagctgaatctgagtgatttttgttgttgtgatagtgagttgatttccaaagaatcgaagcagttgttctgggag  26845600                                                                       --------->ARR11(3)            <---------ANAC58                                           <---------ARR11(3)            <---------ANAC46                                          <---------CCA1(1)            <---------ANAC58                                          --------->GLK1(1)       <---------ANAC58                                               <---------RVE1(1)       <---------ANAC58                                               --------->RVE1(1)      --------->ATHB12                          --------->At4g35610   <---------GLK1(1)     <---------YAB1                    ----------->GT1                --------->CCA1(1)         ----- -------ZAT14                <---------YAB1--------->WOX13(1)        <---------ARR11(3)         <---- ------>ZAT18  <------MYB83<---------At4g35610  --------->ZAT2       --------->ARR11(3)      <------- ------>ZAT14  <------MYB46(1)     <---------YAB1      <---------GLK1(2) >>>>>>>>>RAP2.2    <--------   tttactgatgcttggcttggttccgatggagatgattccgattgtaaatcagctagagattgtcttcttaagatatctaaacaggcttcgactctgttag  26845700  Previous    Next  AGI:  At1g71210.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G06920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76479.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48957.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 26841951    to: 26845152    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g71220.1    Description:  EBS1 (EMS-MUTAGENIZED BRI1 SUPPRESSOR 1); UDP-glucose:glycoprotein glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to hypothetical protein OsJ_007583 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24665.1); similar to putative UDP-glucose:glycoprotein glucosyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD28382.1); contains InterPro domain UDP-glucose:Glycoprotein Glucosyltransferase; (InterPro:IPR009448) Range:  from: 26845292    to: 26855581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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