Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>ZmHOX2a(2)        --------->GLK1(1)        <------ZmHOX2a(2)                                        --------->At4g35610       --------->ARR14(2)                                     ----------->RAV1(2)       <---------ARR14(2) --------->TOE2(1)            <---------ZAT18    --------->TOE1(1)     --------->TOE1(1)            --------->ZAT18    --------->TOE2(1)  --------->ANAC46                <---------ZAT14   --------->LBD16   --------->ANAC46                <---------ZAT18<---------At4g35610   <---------LBD16   <---------ALFIN1          --------->ANAC46  --------->ZAT2   =============HOX2a_HOX2a                    --------->ANAC55(2)  ------>NtERF2   ------>ZmHOX2a(1) --------->REM1(1)   <---------ANAC46    -------->P           <---------ANAC55(2)   tcttcctcggatcccttcgctctacacctcgtccatgtccatgtcttatacgtagtgagcactaacctgcagcccagagacaatacgtagaatggaatga  26835600                                                           --------->ZAT14                                                       --------->MYB52(1)              <------NtERF2                      <---------MYB52(2)      >>>>>>>>>EIN3                             --------->ANAC46               <---------TOE1(3)    <<<<<<<<<<<<<<<<<LFY                        --------->ANAC58       ------->MYC3   <---------ARR14(2)                  --------->YAB1--------->MYB46(3)<-------MYC3<---------WRKY12   <---------ZAT14        <-----------------AGL2--------->ANAC58---------->DOF2<---------TOE2(3)-----   atgagtatacattggaggcaatagaatagccatctatggaatgacaatgcaaggaacaaactgaactaaagcatatggtctaaggtcatcgaaaaaactg  26835700                  --------->ARR14(2)                                     --------->ATHB12                --------->At4g35610                                    <---------WOX13(1)                ----------->GT1                                       <------------CBF                <---------At4g35610                                  --------->ATHB12              <-               >>>>>>>GRF7                                        <------------CBF                <--              <-----------RAV1(2)                                <------ZmHOX2a(1)               ----           --------->TGA1a              --------->ZAT6         <---------TOE1(3)                <----  <---------At5g28300            <------------CBF              <---------TOE2(3)           --------->DAG2 ------->CBF<-----------HVH21  <---------YAB1        <---------YAB1<---------WOX13(1)     ---------->DOF2   caattacagcctcatgtcaggttactctatctcaagattgtatcactaaaacctcttgatagtttaaggattgattgatttgtccaaaaaaaaaaagttt  26835800                                                         --------->TGA2(1)                                                         <---------TGA2(1)                                                         --------->ANAC55(2)                                                         <---------ANAC58                                                         <---------bZIP60(1)                                                         --------->bZIP60(1)                                                         <---------ANAC46                                                         <---------ANAC58                                                <----------ID1       --------->MYB46(3)                   ---------->DOF2      -------->P                   --------->STY1(2)     <---------ANAC55(2)          --------------- --------WOX13(1)                  <---------STY1(2)    ----------->STF1          ------>ZmHOX2a(1) ----------CBF                    --------->ANAC58     <---------TGA2(2)     --------->WOX13(1) ----->ATHB12         --------->TOE2(3)   <-------TEIL----------->TGA1     ------------>CBF---------- -----YAB1------------>CBF        --------->ANAC58------------>CBF  <---------MYB52(1)<--------------   gattgactaacctccaatacaaaatgttaacaagactagcaagatgcaaagggacaatgacgtaagtacccttactcatcaatcctttcgattaaaagta  26835900                                                                      --------->ZAT14                                                                      <---------ZAT14                                                           --------->YAB1                                                          --------->AHL20(2)                                                       --------->AHL20(2)   --------->At4g35610                                                      --------->AHL20(2)<---------REM1(1)                                           --------->CCA1(2)   <------------CBF   ----------->HVH21                ---------->DOF2   <---------ATHB12--------->ZAT18 >AGL15   <---------ANAC46   --------->LBD16      ------------>CBF <---------ANAC46 >DOF2<---------WOX13(1)    --------->HSFB2a(2) <---------At4g35610<---------ANAC58 -AGL15   ----------->GT1   <---------HSFB2a(2) --------->At4g35610<---------ANAC58   tagccatgactgatgtgaaataactaaaatccagaagaaaaagagatttgagctcaataaataaaaattgagtgaagtagctaagacttattttttatgt  26836000              <---------CCA1(2)           <------NtERF2  <---------GLK1(2)         <---------DEAR3(1)                                              --------->LBD16      --------->YAB1 --------->ANAC46                                   --------->ANAC46     <---------ATHB12--------->ANAC58                                <---------ARR14(2)    ----------    ------>MYB46(1)  --------->ANAC58 <---------MYB52(1)             --------->ARR14(2) ------>ZmHOX2a(1)    ------>MYB83     --------->ANAC55(1)  <---------LBD16           <---------GLK1(1)================  --------->MYB46(3) <---------ANAC55(2) <---------ANAC46           <---------CCA1(2)<------ZmHOX2a(2)   tctaccaatcgtcgtcgtctctcacgcaaattcttcattcgttctgtggaaacacagaaatggagactccatatccgaaactcatcgatccttcaaagac  26836100                                                                      <-----------HVH21                                                             --------->ANAC58                                                             --------->ANAC58                                                           <-----------RAV1(2)                                                           <------NtERF2                                                           --------->ATERF1(1)                                                          ------>NtERF2                                                          --------->At4g35610                  ------                  <---------LBD16                         --------->LBD16                     -------                 <------NtERF2                            <---------At4g35610                 <------           <---------WOX13(1)                             <---------ATERF1(1)              --------->AtMYB61          --------->ARR14(2)    ------>ZmHOX2a(2)         <------NtERF2              --------->ANAC58     ==================================HOX2a_HOX2a       --------->DEAR3(1)   --------->ARR14(2)     <------ZmHOX2a(1)        <---------ARR14(2)        <---------LBD16----------->HVH21 ------>NtERF2 >DOF2   --------->ATHB12     --------->ARR14(2)  <---------YAB1  --------->GLK1(2)  --------->ANAC58 ===========HOX2a_HOX2a  <XXXXXXXXXXXXXXXXXXXMIR3434    --------->RAP2.3(1)   --------->ZAT14<-------   tcgaataggatggattggcatcgggataatgggatcggccatggtttctcatattatcgccgcaggctattctgtcacagtttacgctcgcgacctccgg  26836200         ------>ZmHOX2a(2)        --------->CCA1(2)       --------->AGP1       <---------ARR14(3)       --------->ARR14(2)       <---------ARR11(3)       --------->ARR11(3)       --------->ARR14(3)       <---------AGP1                                      <---------At4g35610       <---------ARR14(2)                                  --------->At4g35610      --------->RVE1(1)    --------->ANAC58             --------->LBD16     ----------->ARR10  --------->At4g35610            <---------ANAC46   ---------->DOF2      --------->ZAT2                <---------At4g35610 --->LBD16              <---------ZAT2                --------->At4g35610                  --------->HSFC1(2) -->HSFB2a(2)     ---------->DOF2                     <---------LBD16 <---------MYB52(1)   <---------HSFC1(2) ---HSFB2a(2)     --------->MYB52(1)                 --------->MYB52(1)        <---------YAB1 --LBD16<------ZmHOX2a(2)  --------->ANAC58  ---------->DOF2     ----------->HVH21 <---------MYB46(3)   aaaacaaaagatctgcaaaccaaaggagctcgcatagccaatagccccaaagagttagcggagatgagcgacgttgtgttcacgattgttggaaacttca  26836300                                                                                                  <--                                                                                                  <--                  <---------HSFB2a(2)                                                             <--                  --------->HSFB2a(2)                                                             <--               <----------DOF2                         --------->ALFIN1                           ---              <---------ANAC58                       --------->LBD16                             ----              <---------ANAC58                      <---------DEAR3(1)                          <----         --------->ATHB12       --------->ZAT18    <---------LBD16                              <----         <---------ICU4         <---------ZAT14 --------->ANAC46                                <----        <------ZmHOX2a(2)       <---------ZAT18 --------->ANAC58                           <---------ARR14(2)        <---------ATHB12        --------->ZAT14 --------->ANAC58   <---------ZAT18         --------->ARR14(2)        <---------YAB1----------->HVH21        --------->SPL7      --------->ZAT14        <------ZmHOX2a(1)  <-----------HVH21   ----------->TGA1       <---------SPL7  --------->MYB52(1)           --------->ATHB12   acgatgtccgatcattgcttctcggtgacgatggtgtactctctggtcttacgcccggtggagtaacagtggacatgactagtagcaaaccaggattggc  26836400                                                 <------NtERF2                                                 <---------LBD16                                              --------->ATERF1(1)                                              <---------ABI4(2)                                            --------->ARR14(2)                                          <---------MYB46(3)                                         --------->ALFIN1                                        --------->At5g28300                                        <-------GAMYB                                        <------NtERF2                                       <---------ANAC46         --------->ANAC58              <---------DEAR3(2)         --------->ANAC46              <---------ORA47(2)         --------->ANAC58           <---------ANAC46<---------MYB52(1) ----NtERF2                        <---------MYB46(3) -------ANAC58                 <-----------RAV1(1) <---------DEAR3(2)                               < -------ANAC58             <------ZmHOX2a(1)<---------ARR14(2)                                 <----- -------ANAC46          <------NtERF2<---------ABI4(1)<-----------HVH21                        ------ -------->GT1          <---------SPL7<---------ORA47(1)                                        <----- -->NtERF2            <---------ANAC46 <---------MYB46(3)   --------->ALFIN1            ------------- -----ANAC46          <---------ANAC58<---------DREB2C(2) --------->At4g35610           <---------MYB52(1) -----ANAC58          <---------ANAC58<---------DEAR3(1)<-----------RAV1(2) --------->ANAC58   <----- -----ANAC58 ---------->DOF2   --------->ATHB12 <---------RAP2.3(1)         --------->ANAC58  -------   gcgtgaaatacacgcagaagcgaggcgtaggaattgttgggcggtggatgcgccggtatcaggtggagacgctggagcacgagaggggacgttagggatt  26836500  Previous    Next  AGI:  At1g71170.1    Description:  6-phosphogluconate dehydrogenase NAD-binding domain-containing protein. similar to 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G71180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24698.1); contains InterPro domain 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain 6-phosphogluconate dehydrogenase, NAD Range:  from: 26834331    to: 26835761    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g71180.1    Description:  6-phosphogluconate dehydrogenase NAD-binding domain-containing protein. similar to 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G71170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24698.1); contains InterPro domain 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain 6-phosphogluconate dehydrogenase, NAD Range:  from: 26835997    to: 26837371    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version