Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------TOE2(3)                                                             --------->MYB52(1)          --------->ANAC58                                   <---------DOF5.7(2)          --------->ANAC58                          <---------GLK1(2)          --------->ANAC46                          --------->ARR14(2)        <---------ALFIN1                            --------->ARR11(1)                     --------->AHL20(2)       --------->ZAT14             <-------TEIL     <---------ARR14(2)   --------->At4g35610       <---------REM1(2)        ----------->GT1   ----------->ARR10     ------->GAMYB      <---------AHL20(2)   <-----------GT1             <---------------AtSPL8--------->CCA1(2) --------->MYB46(3)--------->YAB1 --------AHL20(2)    --------->TOE2(3)   <-----------GT1   --------->DOF5.7(2) <---------YAB1   tatttttactacacgcttcaaaacatcaaacagatggtacatattactaccctagatttgggttaacgaatcaacagcagtattatttcaaaaataaata  26728500                   --------->ARR11(3)                   --------->AGP1                   <---------ARR11(3)                   --------->ARR14(2)                   <---------ARR14(2)                  --------->GLK1(1)                --------->LBD16            --------->ARR14(2)            <---------ARR14(2)           <---------GLK1(1)        <-------TEIL        ------->TEIL    <---------------AtSPL8    --------------->AtSPL8   --------->CCA1(2)                                                <---------ANAC58  <---------ARR11(3)                                                <---------ANAC58         <-------  <---------ARR14(2)                                          <---------TOE2(3)              <-------  --------->ARR11(3) <-------TEIL              <---------At4g35610  <---------ANAC46  <---------TOE1(3)  --------->ARR14(2)<------ZmHOX2a(2)      <----------DOF2  <---------AHL20(2)        <---------TOE2(3)   tggagatatgtacatatccgagatccatttctgtttcacacatttctttagctactatgaaatttatgtagcgtttcttagttaatataaggtttacttg  26728600              <---------At4g35610                                                     <----------DOF2              --------->At4g35610                                                    <---------ANAC58            <---------HSFB2a(2)                                            ----------->RAV1(2)   <---------TOE2(3)                                     <------ZmHOX2a(2) <---------ANAC46        <-  --------->YAB1                                        <---------ARR11(3) <---------AtLEC2        <- <---------ATHB51                                       --------->ARR11(3) <---------ANAC58        <- <---------ATHB12      ---------->DOF2              --------->REM1(2)      <---------ANAC58  <-------TEIL --ANAC58   <-----------RAV1(2)                  <---------ANAC46 --------->LBD16    <---------ANAC58 --ANAC58   --------->HSFB2a(2)              <------NtERF2       --------->LBD16     <---------ANAC46   ccaataatgtagttccagatgacaatagagccgagtttgccctagtcgccttcgtgtagatcacatccctgaattttgcctgaagttgcttttgatacat  26728700                                           <----------DOF2                                         <---------HSFC1(2)                                   <---------At4g35610                                              <                             <----------DOF2                                                       <-         <---------ETT(2)   --------->HSFB2a(1)                                        --------->HSFC1(2) --------->ALFIN1           <---------HSFC1(2)   ------>ZmHOX2a(2)           <---------ZAT14     <--- <---------AtMYB61          --------->HSFC1(2) XXXXXXXXXXXXXXXXXXXX>MIR773   --------->ZAT14     ---- --------ANAC46     ----------->HVH21    --------->HSFC1(2)      --------->ANAC58      <---------HSFC1(2) --------ANAC58  --------->TOE1(2) --------->At4g35610           --------->ANAC58      <---------HSFB2a(1) --------ANAC58------->TEIL <---------HSFB2a(1)XXXXXXXXXXXXXXXXXXXX>MIR773B--------->ANAC46  ------>NtERF2   ggtgtggtctctcgacgaacatgtgatggaactttccagccgaagctttgatctcaacttctgtctcaagcttccccactaaactaagacgcttcggcca  26728800       <---------DAG2       <----------DOF2         <---------TOE2(3)    <-----------GT1          --------->MYB52(1) ---------YAB1               ---------->DOF2                                --------->TOE2(3)  *TSS --------ARR11(3) --------->AHL20(2)          <------ZmHOX2a(1)       <----------DOF2         ------- ------YAB1     --------->ANAC58            --------->ALFIN1       --------->ARR11(3)        -------- ----->ICU4     --------->ANAC58 <------ZmHOX2a(1)                 <---------ARR11(3)     <------ZmHOX2a(1)   tgatttttgctttatctcaagaaaatataagtaaaggatttaaggggaggagagtgtttctcttcttgagttctttagcctcaatttgaagaggaatgag  26728900                                                                                       <---------DAG2                                                                                <---------ICU4                                                                                --------->ATHB12                                                                               --------->ICU4   =====      <------------CBF                         --------->AHL20(1)              <---------YAB1   ----- ---------->DOF2                 --------->DAG2--------->ARR11(3)            --------->YAB1     <---- -->ATHB12           <-----------GT1    ---------->DOF2                   <---------CCA1(2)  <------- ->ICU4      --------->YAB1    ---------->DOF2 <---------ARR11(3)       --------->YAB1 <----------DOF2   tgagaaagtattgaagaataattttacccaaaaaaaaggtgttaaagaatatatcgattttttgtttcttaaaatcatatcatgattagctttatttttt  26729000                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                       ------>MYB83                                                                       -------->P                                                                       ------>MYB46(1)                                                                      --------->MYB55(1)                        <---------AHL20(2)                           <---------MYB46(2)                      <---------------AGL15                          <---------MYB55(2)               <---------ICU4                                        --------->AtMYB61               --------->ATHB12                                      <---------MYB59              --------->ICU4                                --------->AHL20(2)              <---------YAB1                                <---------AHL20(2)            --------->YAB1                                  <---------AHL20(1)          --------->ARR11(3)            <-----------HVH21  --------->YAB1       <----------DOF2          <---------ARR11(3)           --------->bZIP60(2)<---------YAB1--------->ANAC58           --         <------ZmHOX2a(1) --------->ICU4              <---------MYB52(1)--------->MYB46(3)        --         --------->YAB1 --------->AHL20(2)--------->bZIP60(1)        <---------MYB111(1)        -----        --------->ICU4<----------DOF2<---------ALFIN1----------->GT1 <---------MYB111(2) <---------ANAC46 =====================================MADS_MADS   --------->PCF5     --------->MYB46(3) <---------TOE2(3) ---------->AGL15     --------------->AGL15      <-----------HVH21  <---------At4g35610 ---------->ID1 -----------AGL15    <-----------------AGL3 <---------REM1(2)     <-----------GT1     ----------->HVH21 --AHL20(2)<------ZmHOX2a(2)<---------ICU4<---------bZIP60(1)<---------YAB1     <---------DAG2<------   ttttttggtaaggatcatgattagctttaattagtagcaccatgtcatcacggtcccgttattataattcacctacccaatactttatttgacgtttaac  26729100                                                                                                 ----                                                                                                -----                                                                                              -------                                                                                              <------                                                                                              -------                                                                                          <---------YAB1                              --------->ANAC58                                            --------->ICU4                              --------->ANAC58                                          <---------ICU4                           <------ZmHOX2a(2)                                            --------->YAB1                        ------>ZmHOX2a(2)                                            --------->YAB1 ---->MYB83      --------->ATHB12                                                   <---------AHL20(2) ---->MYB46(1)  <---------YAB1--------->ANAC46                                      --------->AHL20(2) ------>RAV1(2) <---------AHL20(2)                 --------->ZAT6                  --------->AHL20(2) -----GT1  ----------->GT1<-----------HVH21     <----------DOF2              --------->ZAT6--------->YAB1   ctgccaaactatatggatattattgatcgatcacacaattcatgttgtttctttcactatcaagtttctcttcaaaataacacaaattaataataataaa  26729200                                           --------->ETT(1)                                        <---------MYB46(3)                                    <---------YAB1                                  --------->CCA1(2)  --------->At5g28300            --------->ARR11(1)                                ----------->GT1 ----------->GT1                 <---------ARR11(3)                            >>>>>>>>>>>>>AGL25 ----->DAG2                      --------->ARR11(3)                         <---------------AGL15 ----->DOF2                      --------->ARR14(2)                         --------------->AGL15 -->AHL20(2)                     <---------ARR14(2)     --------->At4g35610----------------->AGL2 ---AHL20(2)                <------ZmHOX2a(2)           <---------At4g35610<-----------------AGL3 -->YAB1                   --------->ARR11(3)       <-----------HVH21      ----------------->AGL3   aagcggtaatagatgaaaatacaatataagatcgagatatggttgtcggaaaaatgtcagcacaaaatagtatttgaaccaaaaatagaaaaataaaact  26729300                                                      --------->ZAT14                               <                                                      <---------ZAT14                             <--            <---------YAB1                            --------->ZAT18                          <-----   ------>ZmHOX2a(2)                ---------->DOF2   <---------ZAT18                   --------->AHL20(2)   ttggatcgctagtttttatagtttgtatagcctttgaacaaagagtttttctcaagttcactacgagtcaaacacttgaaccaaaatagattatatgctt  26729400  Previous    Next  AGI:  At1g70885.1    Description:  pseudogene, similar to major latex-like protein, blastp match of 64% identity and 7.2e-16 P-value to GP|13172242|gb|AAK14060.1|AF239177_1|AF239177 major latex-like protein {Prunus persica} Range:  from: 26728587    to: 26728895    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g70890.1    Description:  MLP43 (MLP-LIKE PROTEIN 43). Identical to MLP-like protein 43 (MLP43) [Arabidopsis Thaliana] (GB:Q9SSK5); similar to MLP28 (MLP-LIKE PROTEIN 28) [Arabidopsis thaliana] (TAIR:AT1G70830.3); similar to MLP28 (MLP-LIKE PROTEIN 28) [Arabidopsis thaliana] (TAIR:AT1G70830.1); similar to MLP28 (MLP-LIKE PROTEIN 28) [Arabidopsis thaliana] (TAIR:AT1G70830.5); similar to major latex-like protein [Prunus persica] (GB:AAK14060.1); contains InterPro domain Bet v I allergen; (InterPro:IPR000916) Range:  from: 26729288    to: 26730206    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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