Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------At4g35610                                               <---------YAB1                       --------->STY1(2)                                             --------->YAB1                   --------->ATHB51                                             <---------ICU4                   --------->AHL20(2) <----------DOF2                      ----------->GT1      <---------YAB1    --------->ICU4 -------ARR11(1)                    ---------->DOF2  ------>ZmHOX2a(1)       <---------YAB1 ------>ARR11(3)                --------->REM1(1) <---------YAB1           --------->YAB1 ------CCA1(2)             --------->ANAC46 <---------ATHB12              <---------ATHB12<----------DOF2   aatctttatgccaatttcattctatctacaagttacaacaaagtaaatcattatcctagttatgctcacttgctcagtcattatttagctagctttctat  26690500                                                                  <---------ARR11(3)              --------->AHL20(2)                     --------->GLK1(1)           <---------ICU4                          <------ZmHOX2a(1)<---------ICU4           --------->YAB1                    <------ZmHOX2a(2)    --------->ARR11(3)          --------->ICU4                     =============HOX2a_HOX2a    <---------YAB1        --------->YAB1                  <---------MYB52(1)--------->At4g35610                       -     --------->YAB1                    <-------GAMYB <---------GLK1(1) --------->YAB1  <-----------GT1  --------->YAB1                      <-----------RAV1(1) <---------At4g35610----------->HVH21    <--   tgaagaataacaataatcaaatatcgaaaatgctatttctctgttggatcaaaggatttcagcttcaagataatgacaattgacacatttcaccattctt  26690600              --------->ARR11(3)              <---------ARR11(3)                                                      --------->MYB52(1)             <---------CCA1(2)                   --------->At4g35610         ------>MYB46(1)        -        ----------->GT1              <---------AHL20(2)        ---------->DOF2       --------->ARR14(2)     <----------DOF2                 <-----------GT1    <---------ALFIN1     ------>MYB83     ------- ----->ZmHOX2a(2)             --------->TOE2(3)  <---------At4g35610     ------->TEIL<---------ARR14(2) -------ARR11(3)           <-----------GT1  <----------DOF2<----------DOF2 <---------MYB59 <---------DEAR3(1)   gatctctctttggttatatctactctaatttacatcaatttacttactttgaactgcctcactttcaaagacatgaaccaaattacagaaacggcgatgc  26690700                                                                                                <----                                                                                                -----                                                                                                <----                                                                                             --------                                                                                            ---------                                                                                            <-------MYC3                                                                                            ------->MYC3                                                    <---------AHL20(2)                      ---------    <---------AHL20(2)                 --------->KAN4(2)                                   --------->O2   --------->AHL20(2)                 --------->KAN4(1)                                    <---------O2 -------->YAB1     ------->MYC3       <---------KAN4(1)                --------->ZAT6      --------->TGA1a -->AtLEC2         <-------MYC3      <---------KAN4(2)             --------->AHL20(2)      <---------TGA1a   aactataaaatttggaatacatgtggaatttggaatgagattattcgtttttatttcattttcttgaaataaaacactatatgccaaaatcaaacgtggg  26690800            <-------MYC2            <-------MYC3            ------->MYC2            ------->PIF5            <-------PIF5            ------->MYC4            ------->MYC3            <-------MYC4           <---------TGA1a           <---------ANAC46      ----------->HVH21                                                                        ------    <---------ICU4                                                                          *TSS-----   ------>ZmHOX2a(1)                         ------>ZmHOX2a(1)                         <---------HSFC1(2) -----PCF5 <---------O2                      --------->HSFB2a(2)                --------->CCA1(2)---- ---->TCP15(1)        --------->ANAC55(2)    <---------HSFB2a(2)              --------->CCA1(2)------ -----PCF2 --------->O2                      <---------HSFC1(1)      ------>MYB46(1)   --------->HSFC1(2) ->ALFIN1  --------->TGA1a           --------->YAB1               --------->MYB46(3)<------ZmHOX2a(1) >TOE1(2)  <---------ANAC55(2)     ---------->DOF2                ------------>CBF ----------->GT1 >TOE2(2)  ===================================bZIP_DOF  ------>NtERF2------>MYB83 <---------TOE2(3)   acctccttatgacacgtggaatttatgtgattcagacaaaagtaatcctagaagtctctgccattagaaccaatctcaagagataaggaaacttcacaac  26690900                                      <---------At4g35610                                     <---------RAP2.3(1)                                    <---------DEAR3(1)                                    <---------RAP2.3(2)                                    <---------RAP2.6(2)                                   --------->SPL7                                                <---                                   --------->ABI4(2)                                            <----                                  --------->ALFIN1                                         --------->ANAC46                                 ------->PIF5                                              --------->ANAC58          --------->MYB52(1)     <-------PIF5                                         --------->ANAC46 --->ANAC58  ------->GAMYB      <---------DEAR4(2)                                    --------->ANAC58 ---->MYB46(3)          --------->CCA1(2)                                             --------->ANAC58 --->GAMYB----------->RAV1(1)   <---------DEAR3(2)                       <---------CCA1(2) --------->ANAC58 --->ANAC58 --------->MYB46(3) <---------DEAR3(1)                 <----------DOF2   ---------->DOF2   caaaaacaagaacaacagacacatagagatgagccggtgcggctctcttgggctctatgccccaaatgctttgccatctctctccttgaagccacgcagt  26691000                                       ------->GAMYB                                      --------->ANAC58                                      --------->ANAC58                                      --------->MYB46(3)                                      --------->ANAC46                                    ------>MYB83                                    ------>MYB46(1)                                        --------->YAB1                                    --------->MYB52(1)                                    <---------ATHB12                                 --------->ANAC46                                         --------->MYB46(3)                                 --------->ANAC58                                        ------>MYB46(1)                               ------>MYB46(1)                                           ------>MYB83                               ------>MYB83                                          --------->ANAC58                             --------->AtMYB61                                       --------->ANAC46                             <---------MYB111(1)                                     --------->ANAC58                             --------->MYB46(3)                                 --------->ZAT14                             <---------MYB46(2)                                 <---------ZAT18                            --------->ANAC58                                    --------->ZAT18                            --------->ANAC46                                    <---------ZAT14        <----------DOF2     --------->ANAC58                                  --------------->AtSPL8  <-----------ARR10       --------->ANAC58                                   <---------ANAC46      --  --------->ARR14(2)      --------->ANAC46                               --------->At4g35610       <- <---------CCA1(2)        --------->ANAC58                               <---------At4g35610       -- --------HVH21       <---------At4g35610 <---------ALFIN1            --------->TOE1(3)  --------->WOX13(1) -----ZAT6       <-----------GT1 --------->ANAC58                    --------->TOE2(3)--------->MYB46(3)   gtcaaatctcctttctgtattacatctcacaccaaacccaacgacactcttcttcatgtaagacttctctaccttagctaagtgtacaaccaatcaacat  26691100                                           --------->ZAT14                                           <---------ZAT14                                           --------->ZAT18                                       <---------YAB1                                     --------->ATHB51                                <---------ANAC46                             <---------MYB52(1)   --------->At4g35610      <-----------HVH21 ----->TEIL                 --------->At5g28300 --------->ZAT14              <---------ANAC58 --------ARR14(2)        <---------At5g28300    <---------ZAT14              <---------ANAC58 ------->ARR14(2)<---------At4g35610<---------YAB1                      ---------->DOF2         -----   gaatctgcagaaaactctctgcttcttcaccgtgacttattattgttcactgcagaatgttaacaagatgagagcaaaggcctgtgatatacttggagca  26691200               <------NtERF2     <---------ANAC58               <---------ZAT2    <---------ANAC58               --------->ZAT2  <-----------ARR10            <----------DOF2               --------->At4g35610        --------->At5g28300     <-----------GT1               <---------At4g35610      --------->ANAC58 --------->ARR11(3)              <<<<<<<<<AtERF-4 <---------ARR14(2)    --------->ANAC46                       <--------        <---------ICU4         --------->ARR14(2) --------->TOE1(2)                    <---------ZAT14      --------->GLK1(2)<---------LBD16  --------->ANAC58 <---------ARR11(3)           <<<<<<<<<<<<<<< ----->DOF2   <<<<<<<<<AtERF-3 --------->ARR11(3) --------->TOE2(2)                   ----------->RAV1(1)   aagaagacaatcttggcagctcaactcggggcagttcttgccacggtaagaacatacgagacctttattcactatcgaaactatgagacaacagtggtca  26691300                                                                <---------ZAT2    <---------ANAC46                                                                --------->ZAT2  <---------ZAT14                                     --------->TOE1(3)          --------->At4g35610                          <---------WRKY18(1)                 ------->GAMYB--------->ZAT14          -                          <-----------GT1                    --------->MYB46(3) --------->ZAT14    <-                        <---------WOX13(1)                  -------->P     <---------At4g35610     ==             --------->MYB52(2)      --------->TOE2(3)     ------->GAMYB   <---------ZAT14    <------ -MYB46(3) <---------MYB52(1)  ------>MYB46(1)            --------->MYB46(3)   --------->ALFIN1   <-- <<LFY    --------->TOE2(3)    ------>MYB83        <------ZmHOX2a(1)<------ZmHOX2a(1)      <---------GLK1(1)   gtaatcgaaaatcgttagtttttcagattgaccatccagccttagcaataacaggagttaacaaccagcaggaattgagcagtgttgtgctcgatatcgg  26691400  Previous    Next  AGI:  At1g70760.1    Description:  inorganic carbon transport protein-related. similar to hypothetical protein OsJ_017415 [Oryza sativa (japonica cultivar-group)] (GB:EAZ33932.1); contains domain PD026898 (PD026898) Range:  from: 26690892    to: 26692046    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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