Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ARR14(2)                                                                                       <---------ARR14(2)                                            <-----------GT1                         <---------ANAC46                                         --------->YAB1                            <---------LBD16 ---------ANAC58                       <---------WOX13(1)                       --------->At4g35610 ---------ANAC58                     --------->ATHB12                           <---------At4g35610 -----DOF2       <----------DOF2 <---------ICU4                                 --------->ZAT2 -ARR11(3)     <---------ATHB12  --------->ATHB12                               <---------ZAT2 >ARR11(3) ------>ZmHOX2a(2)    <---------YAB1  --------->GLK1(2)     <-----------GT1--------->LBD16   tttcttgcactgatccaatcttttacatgttttgatcattgatttataacattctgttccttcacagactttctacaattcaagctgcggatagaatagt  26629800                                       <-----------GT1                                  <-------GAMYB                                       --------->MYB52(1)                          <---------YAB1  <-                    <------NtERF2  <---------ARR11(3)                      <----------DOF2         --          --------->ZAT14   --------->ANAC58                              <---------ANAC46     ------          <---------ZAT18   --------->ANAC58   <---------YAB1             <---------ANAC58     <-----         --------->ALFIN1 <--------P  <---------SPL7   <-------TEIL       <---------ANAC58  <--------   ggctatggacagtggacgagtcgtcgaggtaagccactatcttacggttttgataaatacatagaaaccattgatggctttgattttgactgttatattt  26629900                                                   --------->ANAC58                                                   --------->ANAC46                                                   --------->ANAC58                      --------->ATHB12                                                --------->ARR14(2)                      <---------YAB1     --------->MYB52(1)                         <---------ARR14(2)                ------>NtERF2  --------->ANAC46                            <----------DOF2                     <---------RAP2.6(3) --------ZAT18                         --------->ICU4                            <---------ANAC58 ------->ZAT18               <----------DOF2 <---------ANAC58            --------->MYB52(1)<---------WOX13(1) --------->AtSPL8         --------->ARR11(3) <---------ANAC46      <----------ID1<---------ANAC58   < ----------AtSPL8         <---------ARR11(3) <---------ANAC58<---------TOE2(3)   <---------ANAC46 --- -YAB1                ---------->DOF2---------->DOF2      <---------WOX13(1)   ------>NtERF2    -----   gtacacaaaacagatgggcagtcacaaagaacttttgagcaaagatggcttatacgcgagattgacgaagagacaaaacgatgccgtcttatgattgatc  26630000   ------->MYC2                                                                         --------->TOE2(3)   ------->MYC3                                            <---------ANAC55(2)          --------->TOE1(3)   <-------MYC3                    <---------YAB1       <---------ARR14(2)           <-----------GT1   <-------MYC2               <---------ICU4            --------->ARR14(2)      <---------ANAC46 ---------ALFIN1             --------->ICU4        ----------->TGA1            --------->DAG2 --->ZmHOX2a(1)              <---------YAB1        --------->ICU4          <---------ANAC55(2)      < ->ZmHOX2a(2)              --------->YAB1  <---------AtLEC2--------->ANAC55(2)---------->DOF2   -----   ctacacatgctaaactgttcatgaaatagtcatgattatgtttttgaatggtcatgacgatatgtaatggcaaaattatgtaaagtgtaaccatagagaa  26630100                                                                               --------->ANAC58                                <---------ZAT14                      ------>ZmHOX2a(1)                            >>>>>>>ZML2                             <---------------AGL15                            --------->HSFB2a(2)         <---------MYB52(1)     --------->ANAC46                       <---------ANAC58               <---------ANAC58         --------->ANAC58           --------->ANAC46 <---------HSFB2a(2)       <---------ANAC58   ---------->DOF2    ---------   <---------YAB1      <---------ANAC58          ----------->RAV1(2)--------------->AGL15<---------HSFB2a(2) ---------YAB1    <---------ANAC58               <---------ANAC58  ----------------->AGL3--------->HSFB2a(2) ---->GLK1(1)     <---------ANAC58               <---------ANAC58<-----------GT1      <---------AHL20(2)   ttcttattatttcacacaaatcgtgtcgttctagtatagttgacataaactgcctgccgtttctatatttcctgttaaagcacgaaaatttatagaaagt  26630200                                                      ==========================HOX2a_HOX2a                                                --------->ANAC58                                                --------->ANAC58                                            --------->ANAC58                                            --------->ANAC58                             <---------At4g35610                                        --------->ANAC58            --------->WRKY18(1)<-------------                                        --------->ANAC58    --------->ANAC46     --------->ARR11(3)                                 --------->HSFB2a(2)  ------>ZmHOX2a(2)          <---------ARR11(3)                                 <---------HSFB2a(2) ===========================HOX2a_HOX2a         -                             *TSS<---------HSFC1(1)  <------ZmHOX2a(2)   <------ZmHOX2a(1)          <  --------->MYB46(3)      ------------>CBF  --------->ANAC46--------->ANAC58     <---------ARR14(3) < ->DOF2--------->ZAT14   <-----------GT1--------->ANAC46    --------->ANAC58     --------->ARR14(3) <   ggaaaccactgaagacgacctgtagtttatcaattcgagaacaagcaagcaagcgatctcaaacgcaagagtcaaggactcaagaccttgctgctaatgg  26630300                                              --------->ABI4(1)                                              ------>NtERF2                                              <---------ATERF1(1)               --------->TOE2(3)             ------->GAMYB            <---------ALFIN1                 <---------ALFIN1            --------->DEAR3(1)               --------->DEAR3(1)            --------->AtMYB61                --------->DREB2C(2)           --------->MYB46(3)               --------->DEAR4(2)          ------>NtERF2                <---------PCF5        --------->MYB46(3)           <---------HSFB2a(2)        <---------MYB55(2)           --------->HSFB2a(2)        --------->MYB46(3)       ------>MYB46(1)             ----------->RAV1(2)   <---------GLK1(2)       ------>MYB83               <---------SPL7         <---------ARR14(2)      --------->ANAC58            ------>NtERF2  ------>NtERF2 -------->P      --------->ANAC58           --------->DEAR3(1)      --------->ARR14(2)                         -      --------->ANAC46           --------->RAP2.3(3)------>NtERF2                                   <     --------->MYB46(3)         --------->RAP2.3(1)----------->HVH21                          -------   --------->SPL7               --------->DEAR4(2) --------->DEAR3(1)                        -------- ----AGL2--------->RAP2.6(2)  --------->DEAR3(1) <---------ATERF1(1)               <-----------RAV1(2) -------->ANAC55(2)          --------->DEAR3(2) --------->DEAR3(1)  --------->AtMYB61       <-------- ---------ANAC58       --------->TOE2(2)  <---------ALFIN1<------ZmHOX2a(2)      <-----------HVH21  - ---------ANAC55(2)    --------->TOE1(2)  --------->AtMYB61  ------>ZmHOX2a(1) --------->At4g35610<-- ---------ANAC58      ----------->RAV1(2)--------->MYB46(3)------>ZmHOX2a(2) --------->YAB1 ---------   acgcgtaccagccaccacctcaatacctgagaccgccgtctggaccaccgcctccgacggatccttaccaccaatactatcagcatcaggcgagaccacc  26630400                                                                                             --------                                                                                             <-------                                                                                             <------NtERF2                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->RAP2.3(1)                                                                                          --------->At4g35610                                                                                          <---------ATERF1(1)                                                                                         <---------ALFIN1                                                                                      --------->DEAR3(1)                                                                                      <---------ALFIN1                                                                                      --------->AtMYB61                                                                                   <---------ALFIN1                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                --------->DEAR3(1)                      --------->ABI4(2)                                       <---------ATERF1(1)                      <---------MYB46(3)                                      ------>NtERF2--------->RRTF1(1)                     <---------AtMYB61                                        --------->ABI4(1)               ------>NtERF2                                                 --------->DEAR3(1)               --------->ZAT2                                                ------->GAMYB--------->LBD16           --------->ANAC58                                                  <---------ALFIN1--------      ------>ZmHOX2a(1) --------->PCF5                                      --------->ORA47(2)   ------>NtERF2     --------->ALFIN1        --------->MYB46(3)             --------->ATERF1(1)     < --------->ATERF1(1)<---------MYB52(1)       <---------ATHB12               <------NtERF2--------->ANAC46 -------->ABI4(2) <---------DEAR3(1)        -------->P                      --------->DEAR4(2)      < ---------ATERF1(1)--------->LBD16          ------>MYB46(1)                 --------->MYB46(3)    <-- -->MYB52(1)   <---------ZAT2               ------>MYB83                   <---------ATERF1(1)<------NtERF2 ->AtMYB61 --------->ANAC58   ------>ZmHOX2a(1)                            --------->ABI4(1)--------- -ABI4(2)------>ZmHOX2a(1)  ----------->RAV1(2)                            ------>NtERF2 --------->DEAR3(1) ----->NtERF2 --------->DEAR3(1)  --------------->AtSPL8                  <---------ALFIN1------>NtERF2 -------MYB52(1) <---------LBD16<---------AtLEC2                          --------->DEAR3(1)--------- >MYB46(3) --------->ANAC46------>ZmHOX2a(1)--------->ANAC46 <---------ALFIN1--------->DREB2C(2) ----   ggtgcctcctcctacgcagcccggtggtcctcctgcatggtactccaaccaatttcatcaccctcactctccatcgccaccgcctccacctccgccgcag  26630500                                                                                  --------->RAP2.3(1)                                                                                 <---------DEAR4(2)                                                                                 --------->LBD16                                                                                --------->DEAR3(1)                                                                                <---------ATERF1(2)                                                                     <------NtERF2<------NtERF2                                                                    ------>NtERF2<---------RAP2.3(1)                                                                    <---------RAP2.6(3)                                                                   --------->RAP2.3(3)                                                                   --------->RAP2.3(2)                                                                   --------->ANAC58                                                                   --------->RRTF1(3)                                                                   --------->ANAC46                                                                   --------->DEAR3(1)                                                                   <---------ATERF1(2)                                                                   --------->RRTF1(2)                                                                   --------->ATERF1(2)                                                                   ------->GAMYB<---------RAP2.3(2)       --------->AtMYB61                                           --------->DREB2C(2)     ------>NtERF2                                                 --------->ANAC58    <---------ALFIN1                                               --------->RAP2.6(2)   --------->ATERF1(1)                                            --------->ERF1<---------RAP2.3(3)  --------->ATERF1(1)                                             --------->RAP2.3(1)      --------->At5g28300  <---------ATERF1(1)                                             --------->MYB46(3)   <---------DOF5.7(2)  ------>NtERF2                                                   --------->RRTF1(1)   --------->MYB52(1) ------>NtERF2                                                   <---------At4g35610  ----------->HVH21 --------->PCF2                                                  ------>MYB83  --------->ATERF1(1) <---------PCF5                                                  <---------ATERF1(1) --------->DOF5.7(2) <---------TCP16(1)                                              --------->ZAT2<---------LBD16 ->ZAT14                                                         ------>MYB46(1)--------->ATERF1(2) --ZAT14                                                        --------->ANAC46<---------DEAR3(1) >RRTF1(2)                                                      --------->MYB55(1)--------->ATERF1(1) -->RAV1(1)                                                    --------->MYB46(3)<---------ATERF1(1) >RRTF1(3)  --------->ANAC46                                  <---------At4g35610<---------ORA47(2) ->LBD16<-----------HVH21         <---------MYB59             --------->At4g35610------>NtERF2 -----------TCP11(1)              --------->TOE2(3)        ------>ZmHOX2a(1)  ------->GAMYB--------->DOF5.7(2) ---------PCF2                  ------>MYB46(1)         ------>ZmHOX2a(1)    --------->ANAC46 -------MYB46(3)       ------>ZmHOX2a(1)            <---------ARR14(2)       --------->DEAR3(1) >DEAR3(1)<---------ALFIN1      -------->P          --------->ARR14(2)  --------->AtLEC2  ------->GAMYB >RAP2.3(2)<---------At5g28300  ------>MYB83      <----------DOF2--------->At4g35610------>NtERF2 <-- ----->ALFIN1         --------->TOE2(3)         --------->LBD16<---------MYB55(2)<---------ERF1 -----   tgggggccaccttcaccgcattatcctcaaggccaaccttactcttctcccgcttatcctcctcaccagccgccattcaacgccggcgctaacggtaaca  26630600                                     ------>NtERF2                                    --------->ANAC58                                    --------->DEAR3(1)                                    --------->ANAC58                                    --------->ANAC46                              <---------ARR14(2)                              --------->ARR14(2)                          <------NtERF2                       <---------ZAT14                       --------->ABI4(2)                       --------->ZAT14    --------->ARR14(2)                 --------->MYB52(1)<---------LBD16                      <---------TOE1(2)               --------->MYB46(3) ------>ZmHOX2a(1)                   <-------GAMYB       ------>ZmHOX2a(1)<---------DEAR3(1)<---------ARR11(3)         <---------MYB46(3)        <-----   --------->ARR14(2)  --------->SPL7--------->LBD16   <---------ATHB12<---------MYB52(1) <---------- --------->At4g35610  --------->ALFIN1    <---------ARR14(2)--------->ARR14(2)           <-----------GT1 <---------At4g35610 <---------MYB52(1)  <---------CCA1(2)----------->GT1         ------>ZmHOX2a(1) -------MYB52(1) -------->P  <---------ARR14(2)<-----------RAV1(2) --------->LBD16<---------ANAC46 -->GAMYB ------>ZmHOX2a(1)--------->DEAR3(1) ------>ZmHOX2a(1)    <-----------HVH21    <---------GLK1(1)   gtcagtttcctcctccatctaccggtgcgccgattcctccgccatatcctcaggctaatcaggttactccgtcgttggattgtcctgtgtatttcccctt  26630700  Previous    Next  AGI:  At1g70610.1    Description:  ATTAP1 (Arabidopsis thaliana transporter associated with antigen processing protein 1); ATPase, coupled to transmembrane movement of substances. Identical to Antigen peptide transporter-like 1, chloroplast precursor (TAP1) [Arabidopsis Thaliana] (GB:Q8RY46;GB:Q9CAB3;GB:Q9CAL0); similar to ATTAP2 (Arabidopsis thaliana transporter associated with antigen processing protein 2), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT5G39040.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16101.1); similar to ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 [Physcomi Range:  from: 26625624    to: 26630166    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g70620.1    Description:  cyclin-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO16100.1) Range:  from: 26630229    to: 26634767    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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