Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                           <---------ICU4        <---------AHL20(2)      --------->GLK1(2)                                           --------->YAB1        --------->AHL20(2)     <---------GLK1(2)                                           <--------HAHB4      <---------ANAC55(2)  ---------->DOF2                                          <---------ATHB12     --------->ANAC55(2) <---------WRKY12                                     --------->TOE2(3)       <-----------GT1     --------->LBD16                               <---------TOE2(3)        --------->YAB1           <-----------HVH21 --GLK1(2) ----------->GT1   <---------AHL20(2)        <-------TEIL      --------->ZAT14--------->ARR11(3)   tgagaacaaaacttggttatttctaatgtgtttaatgtttcttaatcattttgcacattcatgttacttaattagtttagtcccgtcaaagattctgatg  26616000                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                           <-------PIF5                                                                                           ------->PIF5                                                                                           --------->TOE1(2)                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          <---------TGA1a                                                                                          <---------bZIP60(2)                                                                                          <---------ANAC58                                                                                          --------->O2                                                                                          <---------ANAC58                                                           --------->LBD16                <---------ANAC46                                                          --------->HSFB2a(2)        --------->ANAC58                                            --------->ANAC58                         --------->ANAC58               <----------DOF2              --------->ANAC58                     --------->ANAC58             <---------DAG2           <---------MYB52(2)  <---------HSFB2a(2)    --------->ANAC58          <---------ALFIN1<------ZmHOX2a(1)--------->TOE1(2)            ============================bZIP_DOF -YAB1 --------->ANAC46 <---------TOE2(3) ---------->DOF2<---------LBD16---------->DOF2----------->HVH21   gagacattcgagccactctttctcttgaggataatgggaaacaaacaagcgagtcaatgtccggaaaatgacattgaagccgaaggcaagggacgtggga  26616100  <---------AHL20(2) --------->AHL20(2) ---SPL7                --------->MYB52(1)                                     --------->DAG2 ---->HVH21      <---------HSFB2a(2)                                          ---------->DOF2    ---- >ALFIN1    <-----------RAV1(1)                                    <---------MYB52(1)        <-------   cgattttataggttgtgttgcagaaaaaacagagtccatatcaattctctcactcgttttttttaatccgttttgtagcaaaaagctagaaatgactttt  26616200                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                               ===============================================bZIP_DOF                                               <----------DOF2                                      -                                    <---------ZAT2                                                  -                                    --------->ZAT2                         ------>ZmHOX2a(2)        -      --------->ARR11(3)            ----------->RAV1(2)                  --------->ARR11(3)         -      <---------ARR11(3)            --------->At4g35610                  <---------ARR11(3)         -    <---------AHL20(2)              <---------At4g35610              --------->O2                   <   --------->AHL20(2)      <---------O2--------->At4g35610         ----------->RAV1(1)   --------->ZAT18 ------->GT1     <-----------GT1  <-----------RAV1(2)        =====================HOX2a_HOX2a       - ---DOF2     <----------DOF2 --------->ALFIN1---------->ID1  ------>ZmHOX2a(1)      <---------TGA1a -   ggttataaaatctttctttttgccgattcaagtggctcagctgcttcgtctttttgtgttctccttatgccacatgatctgatcagacgagtgtccaaat  26616300          ------------>CBF         --------->ANAC58         --------->ANAC46         --------->ANAC58 <-----------TGA1 <-----------HVH21                                                         --------->ANAC58 -------->bZIP60(1)                                                        --------->ANAC58 ---------bZIP60(1)                                                      <---------ALFIN1 -------->ANAC58                            <---------YAB1               ----------->RAV1(1) ---------TGA1a                            <---------ARR11(3)           --------->DEAR3(1) -------->bZIP60(2)                   --------->AHL20(2)                --------->RAP2.3(3) -------->TGA1a                       <---------AHL20(2)  <------------CBF --------->ANAC46       <-- -------->ANAC55(1)              <---------AHL20(2)   --------->ANAC58--------->ZAT18             <-- -------->ANAC58                 --------->AHL20(2)   --------->ANAC46--------->PCF2              --- -------->O2   --------->YAB1 <---------ARR11(3)      --------->ANAC58<---------ZAT18     <---------ANAC58 ---------O2 <------------CBF --------->ARR11(3)    XXXXXXXXXXXXXXXXXXXX>MIR406    ================== -------->ANAC55(2)         ----------->ARR10    ----------->TBP ---------->DOF2   <----------DOF2--- -------->ANAC46       --------->MYB52(1)  --------->ARR11(3)------------>CBF     *TSS    <---------ANAC58   tcacgtcagacacacaattgtaatctaccgaagattttattttaatatcatataaaacgctattgcaataagcgcccacacaagtctttcttacttgccc  26616400                                       --------->MYB52(2)                                   <---------bZIP60(1)                                   ==========================MYC_MYB       =========================================MYC_MYB         <---------ANAC58       =================bZIP_DOF   --------->O2       <------MYB83       ----------->GT1             <---------ANAC58   ----------->GT1       <---------ANAC55(2)         =============MYC_MYB         <---------ANAC46       --------->TGA1a             <---------O2  <---------TOE1(3)       --------->ANAC55(2)         <---------TGA1a    <------MYB46(1)  <---------HSFB2a(2)              --------->TGA1a   --------->MYB111(2)  --------->HSFB2a(2)   --------->ANAC58         <---------TOE2(3) <---------LBD16        --------->ANAC58<-------GAMYB--------->MYB46(2) -------ZAT2          <---------DOF5.7(2)     ------>ZmHOX2a(2) <---------ANAC58 -------ZAT14         --------->MYB52(1)<---------At4g35610   --------->ARR11(3) ------>ZAT2 ================================bZIP_DOF--------->MYB59         ----------------->AGL1 ================bZIP_DOF          <---------ANAC58  --------->MYB111(1)    ---------->ID1 ------>ZAT14<----------DOF2       <---------ANAC46 <--------P<---------AHL20(2)                   --   tgctctggaacgtgactttggaggtaacgaaactgtgtcgtgagttgatctaaggttggtataatttcttgtagttttgtccgatttcgaaaacccattt  26616500                                                                               <------MYB83                                                                               <------MYB46(1)                                                                              --------->MYB46(2)                                                                              --------->MYB111(1)                                                                              <---------DEAR3(1)                                                                              --------->ALFIN1           <----------DOF2                                                    <---------MYB46(3)          <---------DAG2                                                      --------->MYB55(2)         <------NtERF2                                                        <---------AtMYB61        ------>NtERF2                                                         --------->MYB111(2)       --------->DEAR3(1)                                                    <--------P      --------->ATERF1(1)                                    <-------TEIL    <---------MYB55(1)      <------NtERF2                                          <---------ZAT18<---------ANAC58     <---------ATERF1(1)                                     --------->ZAT14<---------ANAC46     <---------RAP2.3(1)                                     <---------ZAT14<---------ANAC58     <---------DEAR4(2)                                   <---------ANAC46 <---------DEAR3(2)     <-----------HVH21                      --------->ARR11(3)             <---------MYB46(3)    <---------DEAR3(1)                      <---------ARR11(3)             --------->MYB55(2)    <---------ANAC58                        <---------GLK1(2)--------->ZAT18<-------GAMYB    <---------ANAC58                   <---------ANAC46<---------ANAC46--------->O2 <---------YAB1 --------->DAG2                    <---------ZAT14     --------->ALFIN1<---------O2 --------->ICU4 -------->DOF2  <----------DOF2    --------->ZAT14   --------->ALFIN1  <---------ANAC46  <---------AHL20(2)   caaaaggcgtcgcctttacttttatatcgtttgagactgttctgtagattttgagttgtggggttcactctctacgtgggttggtgatgattttttttta  26616600                                     <---------HSFB2a(1)                        ------>ZmHOX2a(2)                                     --------->HSFB2a(1)                    <---------YAB1                --------->ATHB12    <---------TOE1(2)                ------>MYB46(1)               <---------AHL20(2)   --------->SPL7      ----------->GT1<---------ICU4          <---------MYB52(1)        <-------TEIL     <---------GLK1(2)<---------ATHB12          <----        <-----------RAV1(1)       <---------SPL7     --------->ARR11(1)--------->YAB1           -----    <---------ZAT14             <---------------AtSPL3 <-------TEIL  ------>MYB83              <-----    --------->ZAT14             <---------------AtSPL8--------->ARR14(1)<----------DOF2 <---------ATHB12   gctctgttcactgttgttttattggaataagttgatggtacgttctgtagttatagattcgataaaaaaccaatctttatgatcgactcaataagtcaaa  26616700                                                      <--------P                                                      <---------MYB52(1)          <---------ANAC46                          <------MYB83          ----------->GT1                           <---------MYB46(3)          <---------ANAC55(2)                      --------->MYB59                           <-------     <---------ANAC46                            <---------MYB52(1)                   <---------ANAC58     <---------ZAT6          ---------->DOF2 --------->At4g35610                      <---------ANAC46 -----ARR14(2)             <---------ZAT6    <---------At4g35610                      <---------ANAC58 ---->ARR11(3)        --------->YAB1   <---------ALFIN1      ----------->GT1       <----------DOF2 ----CCA1(2)   --------->GLK1(1)   --------->GLK1(1)<------MYB46(1)                ------>ZmHOX2a(1)   tcttgttgtgttaagtgaaatctatagtagtgaaagggtctccacttagctgtttggttagtcttgttataagctcgattatgtcctttcttgtgatcag  26616800                                                                            --------->LBD16                                                                            ------>ZmHOX2a(1)                                                    <---------ANAC58        --------->HSFB2a(2)                        <---------REM1(1)           <---------ANAC58        <---------HSFB2a(2)                      <-------GAMYB          --------->YAB1             --------->ARR14(2)                     <---------MYB46(3)      <---------ICU4        ----------->GT1                    <---------TOE2(3)       --------->ICU4        --------->DAG2                    <---------YAB1          <---------ATHB12     ---------->DOF2              --------------->AGL15      <------ZmHOX2a(1)  --------------->AGL15              <---------------AGL15  --------->ALFIN1<----------DOF2    <---------ARR14(2)              ==============================================================MADS_MADS         <------ --YAB1  <---------At4g35610 <---------ANAC46<--------HAHB4 <----------DOF2<---------LBD16    <------   tgtattaatacatctgcttattttggttgtagaggggaagtgaggaatcattttgcttttagctttgaaaagtaaatcctggaaatgtctctcaaggcgt  26616900  Previous    Next  AGI:  At1g70570.1    Description:  anthranilate phosphoribosyltransferase, putative. similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ70838.1); similar to hypothetical protein OsI_005583 [Oryza sativa (indica cultivar-group)] (GB:EAY84350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16117.1); contains InterPro domain Glycosyl transferase, family 3; (InterPro:IPR000312) Range:  from: 26612290    to: 26615947    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g70580.1    Description:  AOAT2 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 2); alanine transaminase. similar to GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) [Arabidopsis thaliana] (TAIR:AT1G23310.2); similar to GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) [Arabidopsis thaliana] (TAIR:AT1G23310.1); similar to AlaT1 [Vitis vinifera] (GB:AAZ43369.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62302.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16115.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); con Range:  from: 26616382    to: 26619732    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version