Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <------NtERF2            ------>NtERF2         <------NtERF2         --------->ATERF1(1)       <---------RAP2.6(2)       --------->ETT(1)      <------NtERF2      --------->ATERF1(1)      --------->DDF1      --------->RAP2.6(3)     <-----------HVH21    --------->ALFIN1                                    <---------ICU4  <------MYB83 --------->At5g28300        <-----------GT1          <---------At5g28300  <------MYB46(1)                    <---------AHL20(2) --------->ATHB12 --------->MYB111(1)                 --------->AHL20(2) <--------HAHB4  <<<<<<<<<WRKY18 --------P <---------ALFIN1  --------->DAG2            <---------YAB1<---------ZAT6   <---------YAB1 ---------------->WRI1      ---------->DOF2       <-----------GT1 <-----------GT1   <-----------GT1   tagtaggtgtcggccaccgtaattgaaacaaaaagcttattaattaacaaaattaccatcatttgtttttactgtcaaaattcaaattaccatcgtctaa  26579700                                                                            --------->ATHB12                                                               <---------ZAT18                                                               --------->ZAT18                                                              <---------ANAC58                <------                                                              <---------ANAC46               --------                               --------->ATHB12               <---------ANAC58              <--------                   <---------ICU4             --------->AHL20(2)   <----------DOF2         --------->AHL20(2)                  --------->ICU4    --------->At4g35610<---------TOE2(3)<---------YAB1  --------->YAB1   cctgtttttgttaacaagtactaattgttgtcttcattagctaagtcataaattctaaaggttagcgtgctattttgatcatttgtgcgataatattata  26579800                                          --------->ZAT18                                      ------                                          <---------ZAT18              <---------ICU4          <-----                                      --------->DAG2                   --------->YAB1         <------                                     ---------->DOF2                  <---------YAB1          <------          --------->YAB1     <---------ZAT6                         --------->YAB1         ------>ZmHOX2a(1)    --------->YAB1     <---------------AtSPL8                --------->ARR11(3)           --------->TOE2(3) ---AHL20(2)           --------------->AtSPL3                <---------ARR11(3)           <---------ANAC55(2) ->AHL20(2)            <---------------AtSPL3               <---------GLK1(1)             --------->TOE1(3) -YAB1<---------AHL20(2)     ----------->GT1                --------->GLK1(1)      --------->YAB1   tatcaaaaataatcgtaaccatgtaatcgtacagttaaaaaaagtgctcttgaatcacgaagaaatctttttataatcactcgaatcgtattccttaaca  26579900                                                --------->AHL20(1)                                                --------->AHL20(2)                                       --------->ANAC58   --------->ICU4                                       --------->ANAC58--------->ICU4                         -------                                       <----------ID1--------->YAB1                          <------- --------->AGL15                      --------->SPL7--------->AHL20(2)                     --------->YAB1 ----------AGL15          <----------DOF2       <---------AHL20(2)  <----------DOF2     --------->YAB1 -----------AG  --------->ARR11(3)<---------------AtSPL8  <---------ATHB51       ----------->GT1 ---- -----------AGL1<---------ARR11(3)<---------------AtSPL3<---------ICU4  <---------TOE2(3) <---------YAB1   catatggcaaacccttgaaatctttcttcttttatactagtacgacaaaataaaataaaaattatggtgtctttaagaaaaacttgtaaattatcataat  26580000                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              <------ZmHOX2a(2)                                            <-----------TGA1                                  <------              <---------ARR14(2)       <----------DOF2                                   <-----------GT1    --------->YAB1                     <---------DAG2<---------ICU4                   <---------ICU4   <---------YAB1                     <---------ANAC58                               --------->ICU4 -->YAB1      --------->ARR14(2)      <---------ANAC58   <---------AHL20(2)          --------->AHL20(2) --YAB1   <-------TEIL              <-----------GT1 <---------ATHB12          --------->At4g35610 ----->AHL20(2)         <---------AHL20(2)  <-----------HVH21                 <---------At4g35610  <-   aaactatgaaaattcatattcgtgatttttttttttttttgcttttcgtcacaaatcatttttttttttttttggttttttgctgaaatatttacgatca  26580100                                                                                         --------->MYB52(2) --------CBF                                                                             <---------MYB46(3) --->ATHB12              --------->RAP2.6(2)                                           <---------MYB52(1) ----ICU4    --------->ZAT14                                                          ------------>MYB.PH3(2) ---YAB1     <---------ZAT14                        >>>>>>>>>>>>>>>>>LFY        ---------->DOF2 --------ZAT18     --------->ANAC46              *TSS                        <----------DOF2<--------   ttgccctcagactactatactacgagaccgcctcaacttggccagtctatctatttccattgtctctatctctctctctctttgaagcagtttgttactt  26580200                                                                          ------->TEIL                                                                          <-----------ARR10                                                                          <---------ARR11(1)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                               <------ZmHOX2a(2)                                --------->ANAC58           <------NtERF2 <---------ARR14(1)                                --------->ANAC58         <---------DEAR3(1)                            --------->ANAC58            --------->At4g35610           <------ZmHOX2a(2)  <----------DOF2           --------->ANAC58         ---------->DOF2     <---------CCA1(2) ---GT1           <---------GLK1(2)              ------>ZmHOX2a(2)     ------>ZmHOX2a(2)  --------->TOE2(3)   cttacttttgtgtttcttcatattcttcagaagcaagcacaaggctagggatcgaagaagcggcgatcactgatcgtatctcactacgatcacattaatg  26580300                                                                    <---------YAB1                 --                                                             --------->SPL7                <---------LBD16                                                           ------>NtERF2                  --------->MYB52(1)                                                           <---------RAP2.6(3)           ------->GAMYB                                                           <---------SPL7                <---------ALFIN1                   ----------->HVH21          <---------ANAC46  <---------GLK1(2)       <---------MYB55(2)            --------->ARR14(2)          --------->DAG2    <---------ANAC58   --------->ATHB12--------        <---------AtMYB61      <---------ARR14(2)         <---------ANAC58<----------DOF2--------->AtMYB61      --------->ALFIN1--------->ANAC46 ---------->DOF2   --------------->AtSPL3         --------->MYB46(3)   gatagaatgtgtggtttccgctcgacggaagactattcggagaaagcgacgttgatgatgccgtccgattatcagtctttgatttgttcaaccaccggag  26580400                            --------->ANAC46              --------->LBD16                            --------->ANAC58             <---------ANAC46                            --------->ANAC58            <---------LBD16                   ----------->HVH21                 <---------ANAC58                   --------->TOE1(2)             --------->GLK1(1)                  --------->DEAR3(2)        <---------HSFB2a(2)              <------ZmHOX2a(1)   ---------->DOF2=================================HOX2a_HOX2a             <---------TOE2(3)  --------->YAB1  ------>ZmHOX2a(2)         <---------LBD16            --------->At4g35610 <<<<<<<<<ARR2  --------->ARR14(2)          --------->HSFB2a(2)     ---------->DOF2 <---------ATHB12<------ZmHOX2a(2)          ------>ZmHOX2a(1) --------->ARR14(2) ------->WOX13(1)==================================HOX2a_HOX2a<---------ARR14(2) ->LBD16        <---------ARR14(2)   <----------DOF2 <---------ANAC58--------->DAG2           <------   acaatcaaagactgtttggatccgacgaactcgctaccgctttgtcctcggagttgcttccgcgtattcgaaaagctgaggataatttctctcttagtgt  26580500                                                                                   <---------ANAC46                                 ------>ZmHOX2a(1)                    --------->ARR11(3)                             <---------ARR14(2)          <---------WOX13(1)        <---------ANAC58                             --------->ARR14(2)        --------->ATHB12 ------>ZmHOX2a(2)     <------                            <---------CCA1(2)      --------->REM1(1)  <---------ARR11(3)    ---------                        ------>ZmHOX2a(1)         ------>MYB46(1)--------->DAG2    <---------ANAC58 ---ZAT6               --------->TOE2(3)          ------>MYB83 ---------->DOF2  <----------DOF2    <-   catcaaatccaaaatcgcttctcatcctttgtatcctcgcttactccaaacctacatcgattgccaaaaggtgatctcgctgctttcgtgttttgtcttt  26580600  Previous    Next  AGI:  At1g70510.1    Description:  KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2); transcription factor. Identical to Homeobox protein knotted-1-like 2 (KNAT2) [Arabidopsis Thaliana] (GB:P46640;GB:Q42414;GB:Q9CAL4); similar to KNAT6 (Knotted-like Arabidopsis thaliana 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G23380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66111.1); contains InterPro domain KNOX1; (InterPro:IPR005540); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Range:  from: 26580149    to: 26586094    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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