Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                                                        --------->ZAT2                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <------MYB83                                                                                <------MYB46(1)                                                                               --------->MYB111(2)                                                                    ---------->DOF2     --------->ZAT14                                                                    --------->AHL20(2)  <---------ZAT2                                                                   <---------ATHB12<---------ZAT14        ----------->HVH21                                 <---------HSFB2a(2)  --------->MYB46(2)      <---------ANAC58                                    --------->HSFB2a(2)  --------->MYB59      <---------ANAC58                                 ------>ZmHOX2a(1)       <---------MYB46(3)    <-----------GT1           ---------->ID1          <---------ANAC58         --------->MYB111(1) --->YAB1                   <---------ANAC58          <---------ANAC58         <---------AtMYB61 --WOX13(1)                 <---------ANAC58     <-------TEIL  --------->MYB46(3)  --------->ZAT14   tcaatttttcttgacatggaccatcgaatttcgtcgcatttactaaatagctacgtccttgtggaaccaataaaacagagtttggtgcagagcaggccat  26572000                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                            --------->AHL20(2)                                                           <---------AHL20(1)                                                           --------->AHL20(1)                                                          --------->AHL20(2)                                                      --------->AHL20(2)                                                     --------->YAB1                                                     <---------AHL20(2)        <---------ANAC58                                                  <---------ICU4               <---------ANAC46                    ----------->GT1              <---------YAB1                <---------ANAC58           <---------YAB1                        --------->ICU4 <---------AHL20(2)     <---------ARR11(3)                --------->ZAT6--------->AHL20(2)      <---------ANAC46     --------->ARR11(3)  <---------YAB1<-----------GT1<---------AHL20(2)<---------MYB46(3)   ggtccaagctcttataaatgcctggttataagagaaacttttcactagttgataattaaaatatatatatatggtggttttgtgtgtctattccaccagc  26572100                                    ----------->RAV1(2)                                    --------->ZAT2                                    <---------ZAT2                                    --------->TGA1a                                    <---------At4g35610                                    ================================================bZIP_DOF                                    --------->At4g35610                                   ------->TEIL                                 ------->GAMYB                                 =============MYC_MYB                                --------->ANAC58           --------->TOE2(3)    --------->ANAC58                 <---------At4g35610                -       ------->TEIL           --------->MYB52(1)   <---------GLK1(2)     ---------->DOF2       ------    <---------YAB1         --------->YAB1      --------->At4g35610  <-------TEIL              -------  --------->YAB1    --------->ARR14(2)       --------->YAB1      --------->At4g35610          <------ <---------YAB1     <---------ARR14(2)      <---------YAB1     <-----------RAV1(2)            <------   attatcatgaatttcttaaaccgattcgagcataacgcacctgagtatcatcagaaactccatctccagatgcattaaagctatccacattcaccagatt  26572200     <---------GLK1(2)                                   <---------ARR11(3)  --------->HSFB2a(2)                       --------->bZIP60(2) ------->P                                  --------->bZIP60(1)  <-----------RAV1(2)       ========== --->GLK1(2)         <----------ID1         <---------bZIP60(1) ------>ZmHOX2a(1)          ---------- -->ARR14(2) <---------ANAC58           <-----------HVH21--------->ARR11(3)          --------->ANAC58 ---GLK1(2)  <---------ANAC46    ---------->DOF2    ------>ZmHOX2a(1)         <---------GLK1(2) <---- ---ARR14(2) <---------ANAC58--------->GLK1(1)     --------->TOE2(3)  <-------TEIL   --------->ANAC58   cttaccagaatattggcttgtaaacgacgagaaatcaaagaaggtcacatcatcctcaatatcatcctcaggtacatcgaggttctcaagcttcccaaga  26572300                                          <---------HSFC1(2)        <---------ANAC58                  --------->HSFC1(2)        <---------ANAC58         ----------------->AGL3                               --------->YAB1        <---------ANAC46      <---------At4g35610     ------->GAMYB                   <--------HAHB4     <---------ARR11(3)       --------->At4g35610  ----------->RAV1(1)                <---------ICU4 ==================================================MADS_MADS              ---------->DOF2 <---------AHL20(2) ------->AG               ------>ZmHOX2a(1)  -------->P     --------->MYB52(1)----------->GT1<------- -----GLK1(2)  ----------->RAV1(1)        --------->At4g35610          --------->YAB1<---------ATHB12   atgtcaagttccttgaacaacatttttcctgtagctccataagaagctaccatcaacagagcaaacagagaaataataaagggtttaatcattttatgct  26572400                               <------------CBF            --------->AtLEC2                --------->ANAC46                        <---------AHL20(2)                --------->ANAC58                     <---------ARR11(3)                --------->ANAC58                     --------->ARR11(3)   <----------DOF2                --------->AtLEC2               --------->CCA1(2)    --------->ATHB12          --------->GLK1(1)   --------->ATHB12--------->ARR11(1)    <---------ICU4       <---------YAB1         --------->ARR11(3)--------->ANAC55(2)--------->ARR11(3)   --------->ICU4      --------->YAB1     ---------->DOF2 --------->ICU4         <---------TOE2(3)    --------->YAB1       <---------YAB1 --YAB1  <---------ARR11(3)<---------ANAC55(2)<---------ARR11(3)--------->ICU4        ----------->GT1   taagaaaaaaagaactccaagcaaagattaagtgattgtatagtttaagatatgagattttatgcaaaaatgatttctttgtaatgagatgataatatgg  26572500                   <------ZmHOX2a(2)                  --------->ARR11(3)                  <---------ARR11(3)         ----------->TBP                         ---------->DOF2       --------->AHL20(2)               <---------ANAC58       <-----------TBP                  <---------ANAC58       <---------AHL20(2)          <------------CBF     --------->AHL20(2)           --------->ATHB12<---------TOE2(3)                       --------->TOE1(3)     ----------->TBP             <---------AHL20(2)              --------->ANAC58         --------->TOE2(3)    <---------ARR11(3)           --------->AHL20(2)    --------->At4g35610          --------->At4g35610    --------->ARR11(3)   <---------TOE2(3)    <----------DOF2    --------->ANAC58   <---------At4g35610    <---------AHL20(1)  ---------->DOF2 <---------ANAC46    <----------ID1       <-------TEIL--------   tttgaatatatatataagcagatcattaaggcgattttattggcttggctttaaagtagatgaagacaagcccttaatacaaattcatctaaccttaaag  26572600                                                           <------------CBF                                                     <---------WRKY45                                                     <---------WRKY12                        --------                                                    --------->WRKY18(1)                     ---------              <----------DOF2                    =======================HOX2a_HOX2a    --------->ANAC58     --------->PCF2<----------DOF2               ------>ZmHOX2a(1)               ---------->DOF2 --------->ANAC58 <---------ANAC58               --------->LBD16 ===========================HOX2a_HOX2a --------->ANAC58 <---------ANAC58           <-----------GT1     ------>ZmHOX2a(2)   <------ZmHOX2a(1) -->DOF2<---------ALFIN1            <---------REM1(2)<---------WRKY38(1) --------->ZAT6--------->ANAC58   cacaaggctcccacttctttgctttactccaaaaactctacacatattttcctggtcaacatattgatcccattaactctgagaaaaggacgcataaagc  26572700                                                   <---------------AGL15                                                   --------------->AGL15                                                  ----------------->AGL2                    <---------AHL20(2)            ----------------->AGL3              <-----------GT1                     <-----------------AGL3             <-----------GT1                      <-----------------AGL2     ----------->HVH21                 --------->AHL20(2)   <---------ANAC55(2)    <-----------GT1         <------NtERF2                                    -- ->DAG2     --------->AHL20(2)         <---------AHL20(2)            ----------->GT1      ----------- ->DOF2     <---------AHL20(2)  ----------->HVH21------>NtERF2       <----------ID1      <---------MYB46(3)   taaacatgtgacatttaaacattttttttaacttgtgacatttaaacatggtgccatatatagtttggaaaacgaaaaatcaaacatatagttgttgtcc  26572800                       --------->AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)                   --------->AHL20(2)                 <---------AHL20(2)             <---------AHL20(2)                       ------>MYB83             --------->AHL20(2)                       ------>MYB46(1)           --------->AHL20(2)                         -------->P     --------->CCA1(2)          <---------AHL20(1)                        <---------MYB59 --------->ARR14(2)          --------->AHL20(1)                        <---------MYB46(2)         --------->AHL20(2)                         <---------MYB111(2)     --------->AHL20(2)<---------AHL20(2)           <---------MYB111(1)   ----------->GT1 <---------AHL20(2)               --------->MYB46(3)         <-------TEIL  ------->TEIL <---------AHL20(2)              <---------REM1(1)    <---------ARR14(2) <---------AtLEC2--------->AHL20(2)           <---------------AtSPL8--------->ARR11(3)--------->AHL20(2) ------->AtLEC2--------->AHL20(2)       <---------WRKY12--------->TOE2(3)  <-------TEIL<---------AHL20(2) ------------>TaNAC69(2)        <---------YAB1--------------->AtSPL8<---------ARR11(3)<---------AHL20(2)   catgcatgtaaatatatatatatatatatatagtactataggtcaattgttgtaccaaccttgagttgaagatttgatacgttcaaaattttttttttag  26572900  Previous    Next  AGI:  At1g70500.1    Description:  polygalacturonase, putative / pectinase, putative. similar to polygalacturonase [Arabidopsis thaliana] (TAIR:AT1G23460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66097.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Parallel beta-helix repeat (InterPro:IPR006626); contains InterPro domain Glycoside hydrolase, family 28; (InterPro:IPR000743); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 26570242    to: 26572392    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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