Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->AHL20(2)                                                                                  ----------->GT1                                                                                --------->ZAT14                                                                                <---------ZAT14                                                                             --------->MYB52(2)                                                                           <---------MYB52(1)                                                          xxxxxxxxxxxxxxxx>smallRNA(i)  --------->YAB1                                                     --------->YAB1       <----------DOF2                           --------->ZAT6           <---------ATHB12     <---------ANAC46                     <---------AHL20(2)        --------->ANAC46          <---------ANAC58       <----  --------->AHL20(2) --------->AHL20(2)    <---------At4g35610           <---------ANAC58 <---------YAB1 ---->DOF2     --------->YAB1    --------->GLK1(2)--------->WOX13(1)--------->MYB52(1)  <-----------GT1   agaattaaaacatagaagcataatttataacacaaattctagttcatctactcaatcaaaacatccaaactaatggcgttagtgaagtaattacaatttt  26565100                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                              --------->HSFB2a(2)                                              <---------HSFB2a(2)                                             <xxxxxxxxxxxxxxxxsmallRNA(i)                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      <xxxxxxxxxxxxxxxxsmallRNA(i)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                 xxxxxxxxxxxxxxxx>smallRNA(i)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                <xxxxxxxxxxxxxxxxsmallRNA(i)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            ---------->DOF2 <xxxxxxxxxxxxxxxxsmallRNA(i)                       <----------ID1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <---------HSFB2a(2)--------->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(s)       --------->HSFB2a(2)--------->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(i) --------->GLK1(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  --------->DAG2 <-----------ARR10  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ---------->DOF2 --------->ATHB51---------->DOF2 -------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->GT1   gcgattcttcgcgaattagttgaagaagacgaaagacgagtgcaacttgtagaagcctacaaagtttaaaacccataatttgatggggtcaaaaagtaga  26565200                   --------->ANAC58                   --------->ANAC58                   --------->ANAC46                 <-----------GT1                                         --------->ANAC58        <---               <-----------GT1                                           --------->ANAC58        ----       --------->AHL20(2)                        <---------ICU4          --------->ANAC46       <----       --------->YAB1                  <----------DOF2         ----------->RAV1(1)            -------      <---------ATHB12             <---------ZAT18             <---------ALFIN1         --------->HSFB2a(2)    --------->WOX13(1)    --------->YAB1    --------->ZAT14 <-----------GT1          <----------DOF2<   acatatcaatgaaattttttcacgccagtgatactcgtgaactttgtatactcattccatttctaccacatttgcactcaatacaatcttttagaatcat  26565300                                                  --------->TOE1(3)                                                  --------->TOE2(3)                                                  ----------->GT1                                                 --------->ANAC58               --------->ANAC58                                                 ----------->GT1 --------->AHL20(1)                               ----------->GT1   --------->ANAC58<---------ARR11(3)                            <---------ZAT2  <---------------AtSPL8              --------->ANAC58                            <---------STY1(2)   <-----------------------TaNAC69(2)               ----                            --------->STY1(2)   <-------TEIL     --------->ARR11(3)              ---- ------ICU4                --------->ANAC58 --------->DAG2      --------->CCA1(1)                <--- ----->YAB1                --------->ANAC58 <---------------AtSPL3             --------->SPL7   ----- -----YAB1      --------->ARR11(3)          --------------->AtSPL8           ----------->HVH21  ----- -->YAB1    ---------->DOF2--------->ANAC46--------->DAG2       --------->RVE1(1)        <-----------GT1 -----------GT1 <---------ARR11(3)        ---------->DOF2<----------ID1  --------->MYB52(1)--------->ZAT6   aataacttcttgagaaaagaacttggtccaagctagtgaaatcaaaaaggtacgttaaaaaaacaaatatcttacaaacgggacgcagttttcacagtaa  26565400                                                                                       ------->PIF5                                                                                       ------->MYC3                                                                                       ------->MYC4                                                                                       <-------MYC3                                                                                       <-------PIF5                                                                                       *TSS                                                                                       -------->ABF1                                                                                       ------->MYC2                                                                                       <-------MYC4                                                                                       <-------MYC2                                                                                      >>>>>>>>>>HY5                                                                                      --------->O2                                                                                      <---------TGA1a                                                                                      >>>>>>>>>>ABI5          --------->ANAC58                                                            <---------bZIP60(2)          --------->ANAC46                                   --------->ANAC46         --------->TGA1a          --------->ANAC58                  --------->DOF5.7(2)                       --------->ANAC55(2)     --------->ANAC46                       <---------MYB52(1)                        <---------ANAC55(2)     --------->ANAC58                      --------->TOE1(3)--------->ZAT18           >>>>>>>>>>AtMYC2     --------->ANAC58                    <---------TOE2(3)  --------->LBD16           ===============    --------->RAP2.6(3)             --------->GLK1(1)     <---------LBD16        --------->ANAC46   --------->MYB52(1)             <------ZmHOX2a(1)     <-----------GT1          --------->ANAC58 ----->At4g35610              <---------ANAC46  --------->TOE2(3)                --------->ANAC58 ------->GT1               --------->ALFIN1--------->TOE2(3)<---------ZAT18      <----------ID1------ ------At4g35610     ---------->DOF2<---------GLK1(1) <---------ICU4           --------->MYB52(1) ---->ANAC58 <---------TOE1(2)<---------ANAC58 <---------At4g35610      --------->At4g35610   <------ ---->ANAC58 <---------TOE2(2)<---------ANAC58 --------->At4g35610      --------->ZAT2<---------O2   gctaaaaacggcacgcaggtttctaaagagtggcgaggatttcaacgttagcttaatttttccgcgctaagaccagctaaaaaacgacacgtggcaatcg  26565500                 <---------ANAC58                            --------->ANAC46   ------>ZmHOX2a(1)                                      --------->GLK1(2)                     -----  --------->TOE2(3)                                       --------->ARR14(2)                  <------ ========================bZIP_DOF                         <---------ARR14(2)             <---------ICU4 --->YAB1        <---------ANAC58          <-----------RAV1(1)<-----------HVH21       --------->YAB1 ---ATHB12    <----------DOF2  ---------->DOF2           <---------GLK1(2)   ---------->DOF2  <------   tgttcctcaatggtctctttcgtccaagaccagaaaagagaagaaatgtggccactctagaatccgtcgcatctcgattcaaagctattgataatttcgt  26565600                               <---------CCA1(2)                             --------->ALFIN1                           <---------ANAC46                           <---------ANAC58                 <---------ANAC55(1)                               ------>MYB83                 --------->ANAC55(2)                               ------>MYB46(1)                 <---------ANAC55(2)                              ----------->RAV1(1)       <---------AtLEC2    <---------ANAC58           ----------->HVH21  <<<<<<<<<TBF1  <---------ANAC58                   <---------ANAC58    --------->DAG2 ----->ID1       <---------ANAC46                   <---------ANAC58   ---------->DOF2 ---ANAC58       <---------ANAC58               <----------DOF2 --------->MYB46(3) ---ANAC58     --------->MYB52(1)           <----------DOF2--------->ANAC46                       ---   cttcttcttccatggaataacgtgtttaggcgtgtatcacatggttctttctttgtgtgacacaaaaccaacataaagcttccatacgatttagacattg  26565700                ------>ZmHOX2a(2)                ==================================HOX2a_HOX2a                ====================HOX2a_HOX2a               <------ZmHOX2a(2)               ===================================HOX2a_HOX2a               =====================HOX2a_HOX2a               --------->CCA1(2)               --------->ARR14(1)              --------->AGP1              <---------ARR14(2)                     --------->ALFIN1              <---------AGP1                       <-------GAMYB              <---------ARR11(3)                   <---------ANAC46              --------->ARR14(2)                  --------->MYB55(2)              --------->ARR11(3)                  <---------MYB46(3)                     <---------AHL20(2)              --------->ARR14(3)                 <---------ANAC46                --------->ZAT14  <--            ----------->ARR10               <---------ARR14(2)                   <---------At4g35610        --------->YAB1       ------>ZmHOX2a(1)   --------->ETT(1)                --------->At4g35610  ==================================HOX2a_HOX2a<-----------HVH21        ---------->DOF2  --------->AHL20(2)  ------>ZmHOX2a(2)      --------->ARR14(2) --------->ARR14(2)       --------->TOE2(3)  --------->AHL20(2) ------>ETT(2)<---------ARR14(3)           <------ZmHOX2a(1)      <----------DOF2<---------ZAT14  ---   tcgatcgctattgtaagatctggtctgggtcctcgattttggtgaggattgtcgggtggaacaaaactctttcttaaaggctctgcagaaattaattctc  26565800            <---------YAB1            ----------->HVH21                                                                 -------           ------>ZmHOX2a(2)                --------->ATHB12                     <----------DOF2    -          <---------At4g35610             <---------DAG2                        <---------ANAC58    <         --------->ARR14(2)               <---------------AGL15               <-----------GT1 <------         <---------ARR11(3)               <----------DOF2                 <---------DAG2    <--------         <---------AGP1              <---------At4g35610                  <----------DOF2   ---------         <---------ARR14(2)        <-----------RAV1(2)          <---------MYB52(1)     <---------MYB52(1) -------ZAT14                <---------GLK1(2)     <---------DEAR3(1)---------->DOF2  <----------DOF2 ------>ZAT14           <-----------GT1 <-------TEIL           --------->TOE2(3)<---------ANAC58   --   tgctctggctggatctgatagtgattttacagattgttcaggtgctttattgggctgtgtttcttcgttagtaaagctttttgctttcctttagtttagt  26565900                                                                              <---------At4g35610                                                                              --------->At4g35610  --------->TOE1(3)                                                           <------ZmHOX2a(2)  --------->TOE2(3)                                                       --------->LBD16 ---->GT1                                                               <---------LBD16 -------->ARR11(3)        <----------DOF2               <-----------HVH21<---------LBD16 ---------ARR11(3)    <---------RAP2.6(2)           <---------ZAT14   --------->ARR14(2) ---ANAC46            <---------RAP2.3(2)           --------->ZAT14   <---------ARR14(2) -ZAT14              <---------LBD16               --------->ALFIN1  --------->WOX13(1) >ZAT14        <-----------GT1                    <---------ZAT14    --------->GLK1(1) ------->GLK1(1)  <----------DOF2                 --------->ZAT14    <---------GLK1(1)          -----   gaaatcttaaaaatgtttaactttgcggctttacttcaattgccttatacactgtgcaggtcagaaatgggcaatccgggatcagacacagagagaaaca  26566000  Previous    Next  AGI:  At1g70480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66084.1); contains InterPro domain Protein of unknown function DUF220 (InterPro:IPR003863) Range:  from: 26565487    to: 26567472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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