Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    ------>ZmHOX2a(1)                                                                                  <-----------HVH21                                                          --------->LBD16     <-----------------AGL1                    --------->ANAC46                     --------->ANAC46  <---------ARR14(2)                    --------->ANAC55(1)               <---------ARR14(2)   <---------GLK1(2)                 <-------TEIL                         --------->ARR14(2)   --------->ARR14(2)      <-           <---------ZAT18                    <----------DOF2           --------->ANAC58        <----     <-----------RAV1(1)                      <---------DAG2            --------->ANAC58       ------    <---------DEAR4(1)               <----------DOF2 <---------CCA1(2) <---------LBD16         <-----   actgtgtctgtggtacacatacacataacaccttgaatactttgtcaactttatcgtatccgaaaaaacttctcacggatgctccttcaggcacttggat  26530600                                                           --------->TOE2(3)                                                       <---------CCA1(2)           --------->LBD16                          <---------YAB1  --------->At5g28300                              --------->AHL20(2) ----------->GT1                                  <---------ICU4 --------->LBD16                                  <--------HAHB4 --------LBD16             --------->LBD16       <---------YAB1                                    -- -----GLK1(1)             <---------LBD16        --------->ICU4 ----------->HVH21                ---- --->ARR14(2)   <----------DOF2        <-----------GT1<---------AHL20(2)                         ---- ----ARR14(2)   <---------DAG2         --------->YAB1--------->YAB1                             -----   ttgcggtaaattccgaaactttttcagaccgggattgcaaatcacaatctcattattatatccttgatgacagagcaaaccaagaatgggattagaaacc  26530700                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                       --------->WRKY12                                       --------->WRKY38(1)                                      <---------MYB52(1)                                            -                               ----------->RAV1(2)                                           <-------                               <---------At4g35610                                           <-------                               --------->At4g35610                                           <-------                               ================================RAV                         <---------ANAC58                              --------->GLK1(2)                                            <---------ANAC46 ------->REM1(2)           --------->ANAC58                                                <---------ANAC58 ----->LBD16               --------->ANAC58        ----------->RAV1(1)                  <---------ARR14(2) ----->At5g28300  <---------YAB1      --------->DOF5.7(2)     <---------ARR14(2)        --------->ARR14(2) ------>GT1       --------->ICU4    <---------ANAC46        <---------MYB46(3)  ---------->DOF2     <   gtgaaaactggtgctatgtgattatcggtaagcatctgccgtttaccagacaacaacaatggtggttcttgataaacagagtgaaagcaggtttcgcgtg  26530800        <---------ARR14(2)        --------->ARR14(2)      <---------RAP2.3(1)     <---------ANAC46                 <---------ANAC58     <---------RAP2.6(2)              <---------ANAC58                                    <---------TOE2(3)    <---------LBD16                 ------>NtERF2            --------->ANAC58            ---------->DOF2 -------->ARR14(2)           ------->GAMYB                   --------->ANAC58      --------->ANAC55(2) --ANAC58                   --------->MYB46(3)           --------->ANAC58          --------->ANAC58 --ANAC58                 ----------->RAV1(1)            --------->ANAC58          --------->ANAC58 --ANAC46                --------->MYB46(3)       ------>ZmHOX2a(2)                --------->ANAC46 ---------ARR14(2)   <---------MYB52(2)        --------->ATHB12                  <---------ALFIN1   <   tgaatttgcggctacgactagcgacgaacaacagtcgaggccttgccattgatcggagcaagtaagcacttctgaagtcttccccacgtattaaagatgc  26530900                     <---------At4g35610                  <-------TEIL                 --------->ANAC58                ------->MYC3                ------->PIF5                <-------PIF5                <-------PIF4                ------->PIF4                <-------MYC2                           --------->GLK1(2)                <-------MYC4                  <---------ANAC58                <-------MYC3                  <---------ANAC58                ------->MYC2                  --------->YAB1              ------->TEIL                   <---------ATHB12     <---------ANAC58           --------->ANAC58  --------->ANAC55(2)      <---------GLK1(2)           --------->ANAC58  <---------ANAC55(2)      --------->ARR14(2)--------->HSFB2a(2)    <----------DOF2 ------->TEIL        --------->ANAC58          <---------AtLEC2 ---------CCA1(2)--------->ANAC58       --------->ANAC58          <---------ANAC58                 <-   ccatttctttgagacgcacatgcatctcattaagtatttcagaggcaatcgtgccagaatctctatttgcatgtctagagcaagtgtttcgaaacttgtg  26531000                                    <---------AHL20(2)                                  <---------AHL20(2)                                 <---------AHL20(1)                                              <---                            --------->YAB1                                                      <----                           <---------ATHB12                                         <---------ARR14(2)                          <---------TOE2(3)       <----------ID1        --------->AHL20(2)      -----                      <----------DOF2 <---------AHL20(2)                --------->ICU4        -------      <---------AHL20(2) --------->YAB1     <-----------RAV1(1)  ----------->GT1   <---------CCA1(2) ----------GT1  <-----------GT1  --------->AHL20(1)       --------->ZAT18 <-----------TBP    --------   ttcaccattttttttttttttctgctctaatgatatatatttttttgtgttggagacaaatgcacagatgtgaaatatttatagcaaatctcaagagttt  26531100       <------MYB83       <------MYB46(1)      --------->MYB46(2)      --------->MYB111(1) <---------ANAC46 ----GAMYB   <----------DOF2                                            <---------AHL20(2) -----MYB46(3)                                                <---------AHL20(2) ---->MYB52(2)                                      <---------AHL20(2)  --------->AHL20(2)  --------- ---------------->TaNAC69(2)                  <---------CCA1(2)  <----------DOF2  ---------->DOF2 ---->MYB.PH3(2)     <-----------GT1       --------->LBD16    <-----------GT1    --------->AHL20(2)   gttgtgagtaggtgactttagtttaacttgttgagttttgtaatgcgcatatttttaatctaatttactttcatttaaacaaattaaagcagatgtttca  26531200                         --------->ATHB12                         -------->ATHB1                         <---------ICU4         <---------DOF5.7(2)        --------->YAB1       --------->DOF5.7(2)       --------->WOX13(1)      --------->TOE2(3)  --------->ATHB51      --------->TOE1(3) <---------AHL20(2)     --------->ANAC46   <---------YAB1                                                      ---------     --------->ANAC58   --------->ICU4                                                   <---------ZAT14     --------->ANAC58   --------->AHL20(1)                                               <---------REM1(2)   <---------ALFIN1     --------->AHL20(2)                                               --------->ZAT14 <---------ALFIN1  --------------->AGL15       --------->ICU4                       <------------CBF -------------->TaNAC69(2)     ------------>CBF<---------YAB1                   <----------DOF2   cttccacacgttaacgacttactaaaattattagccaattagaatagagattattagataaaacatgaaatcgacagggttcctttcattgtacacggtt  26531300                                 <-----------TGA1                                --------->ANAC46                                <---------ANAC55(2)                                --------->ANAC55(2)                                <---------O2                                --------->TGA1a                                --------->ANAC55(1)                                <---------TGA1a                             <-----------GT1                                --------->O2                         --------->ATHB51                                --------->bZIP60(2)                  --------->AHL20(2)                                --------->ANAC58                     <---------AHL20(2)                                --------->ANAC58                     --------->ATHB12                               <-----------STF1                      <---------ICU4                              <---------ALFIN1                      --------->ICU4                   <---------AHL20(2)                            <---------AHL20(2)                  <---------AHL20(2)                             --------->AHL20(2)     <---------AHL20(2)     <-----------GT1                   --------->ATHB12 >ANAC46          --------->AHL20(2)          ----------->HVH21 <---------WOX13(1)       ---------->DOF2   tagtagtttaattcatcgaataaaattgattcacacgtcataatatggatgacatgagtcacattgattaattatttgtaactgcatgagaaaaagatgt  26531400                   <---------YAB1                 --------->AHL20(2)                <---------YAB1                <---------AHL20(2)               <---------AHL20(1)                                        <---------REM1(2)         ----------->GT1                                                 <---------ZAT14        --------->DAG2                                         <----------DOF2       ---------->DOF2                                        <---------ANAC58    --------->ANAC46                                      --------->GLK1(1)    --------->ANAC58                                     --------->ARR14(2)    --------->ANAC55(1)                                  <---------GLK1(2)    --------->ANAC58           <-----------GT1           <---------ARR14(2) --------->ANAC46    --------->ANAC55(2) --------->YAB1             ----------->HVH21     --------->ZAT14    <---------ANAC55(2)<---------YAB1          ---------->DOF2<---------ANAC58           <---------AHL20(2)   aatcacacgtaaagtaatattatttatgaaaatttagcatataaaaactgaaagtgacagatttgctttcaattgtacacggtttagtagtttaattctt  26531500  Previous    Next  AGI:  At1g70380.1    Description:  F-box family protein. Identical to Putative F-box protein At1g70380 [Arabidopsis Thaliana] (GB:O64598); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G70960.1); similar to S locus F-box protein with the low allelic sequence polymorphism 2-Sf [Prunus mume] (GB:BAF36717.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 26529875    to: 26531008    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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