Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->KAN4(2)                                                                    <---------HSFB2a(1)                                                                    --------->HSFB2a(1)                                                                    --------->KAN4(1)                                                                    <---------KAN4(1)                                                                    --------->HSFC1(2)                                                                --------->DEAR3(1)                                                               --------->RAP2.3(1)                                                              --------->ABI4(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                              --------->At4g35610                                                             <---------ATERF1(2)                                                             --------->RAP2.3(2)                                                             --------->ATERF1(2)                                                             <---------DEAR3(1)                                                             --------->DEAR3(1)                                                             --------->RRTF1(3)                                                             --------->RRTF1(2)                                                             --------->RAP2.6(2)                                                             --------->RAP2.3(3)                                                            --------->RAP2.3(1)                                                            --------->DEAR4(2)                                                            --------->RRTF1(1)                                                            --------->ORA47(2)                                                            --------->RAP2.6(1)                                                            --------->ERF1                                                            --------->ATERF1(1)                                                           <---------ATERF1(1)                                                          --------->ANAC46                                                          ------->GAMYB                                                          --------->DEAR3(1)                                                         --------->DEAR3(2)                                                       <---------ARR14(2)                   <--------                                                --------->At4g35610 <---------HSFC1(2)  <---------MYB111(2)          ------->GAMYB                         <---------At4g35610<---------KAN4(2)    <---------MYB111(1)         <---------MYB52(2)                     --------->LBD16<------NtERF2            <---------MYB46(2)       --------->MYB52(1)                    ------>ZmHOX2a(1)--------->LBD16   ------>NtERF2 ------>MYB83   --------->HSFB2a(2) <----------DOF2<---------GLK1(2)--------->ARR14(2)      ----------->HVH21   <---------HSFB2a(2)<---------ANAC58--------->ARR14(2) <------------AtMYB77  --------->DEAR3(1) ------DOF2           <---------ANAC58<---------ARR14(2) --------->MYB46(3)  ------>ZmHOX2a(1)------>MYB46(1)   ttgttccagtaacgaactagagatgcttttggagtaaatggattctcctccgctgagaaaccgccgccgaatgttcttcctccgacgataactacctaca  26518500                                             --------->LBD16                                            ------->GAMYB                                            --------->ANAC46                                            --------->RAP2.6(2)                                           --------->MYB46(3)                                           <------------AtMYB77                                         --------->ARR14(2)                                         <-----------GT1                                         <---------ARR14(2)                                  --------->GLK1(2)                    --------->YAB1           -----                                  --------->ARR11(3)                   <---------ICU4           <----                                  <---------ARR11(3)                  --------->ICU4            -----  ----------->RAV1(1)   --------->MYB46(3)<---------At5g28300       --------->YAB1---------->DOF2 -MYB59         <-------TEIL----------->RAV1(1)             <-----------GT1   --------->YAB1    <----   ttgccaacaaaatccaaattcattcaacaacaacaaaatctagtaaccgcaaattcaaaaattcactagataataatcaatagtaaaagagattgaagaa  26518600  <----------DOF2 ----->TaMYB80               <------ZmHOX2a(1) -----KAN4(2)                --------->ATHB12                                 <---------ETT(2) ---->ARR14(2)         <------ZmHOX2a(1)    --------->GLK1(2)      <<<<<<<<<TBF1<---------ZAT14 -----ARR14(2)  <------ZmHOX2a(1)       >>>>>>>>>TBF1          ---------->ID1 --------->ETT(2)-------   tatgctttacattgaagaggaagaaggagaaggattggagaagaagaaactgtttgagcatttttgttcttcttctagtgtctacagagagagaagagca  26518700                                                               --------->AHL20(2)                                                 <---------AHL20(2)                                                 <---------------AGL15                    --------->ATHB12             =============================MADS_MADS                  <----------DOF2               --------->AHL20(1)                 <---------ANAC58               <---------AHL20(1)     --------->ANAC58                 <---------ANAC58         ----------->GT1     --------->AHL20(1)           <------MYB83                   <---------ZAT6      <---------AHL20(1)              <------           <------MYB46(1)            <---------ARR14(2)     <---------------AGL15          ---------          <---------AtMYB61           --------->ARR14(2)    <-----------------AGL3         --------->ICU4 -->At4g35610 <---------ZAT18     <---------At4g35610   ----------->GT1--------->ANAC58    <---------ATHB51   gagaagaagagattggtgggcttgtttgggtttgagagcggattgtgttatatatttgtggtaatatatatagaagccaaaaaaacttacacaattatgt  26518800                                                                        <---------AHL20(2)                                                                  --------->YAB1                                                                <-----------TBP                                                              <---------AHL20(2)                              --------->AHL20(2)             <---------AHL20(2)                              <---------AHL20(2)             <---------AHL20(1)                         <---------AHL20(2)                  --------->AHL20(1)                         <---------AHL20(1)              <---------AHL20(2)              <---------ANAC46                         --------->AHL20(2)        *TSS  --------->AHL20(2)              ----------->GT1                         --------->AHL20(1)       <---------AHL20(2)<---------YAB1       <---------ANAC55(2)                        --------->AHL20(2)        --------->AHL20(2)<---------AHL20(2) <---------DOF5.7(2) ---YAB1                <---------AHL20(2)     <----------DOF2--------->AHL20(2)    <------MYB46(1) >YAB1            --------->ANAC46      <---------AHL20(2)   --------->AHL20(2)     <------MYB83   --   tttctccataactaaaccctacacaattaaatttaaatctatttatagacttttaatttttaatttatttataatttatgtatagttggtaacgtataat  26518900                                <---------YAB1                             --------->AHL20(2)                             --------->AHL20(1)                         <---------AHL20(2)                      --------->ARR14(2)                                         <---------AHL20(2)                   <---------ANAC58                                           --------->YAB1                   <---------ANAC46  <---------AHL20(2)            <---------TOE2(2)                   <---------ANAC58<---------YAB1                  <---------TOE1(2)         --------->AHL20(2)  <---------AHL20(1)         <---------AHL20(2)   <---------YAB1         <---------AHL20(2)  <---------AHL20(2)         --------->AHL20(2) <---------ICU4      --------->ATHB51<---------ARR14(2)   --------->ATHB12   --------->ARR11(3) --------->AHL20(2)      --------->AHL20(2)------------>CBF--------->ANAC55(2)   <---------ARR11(3)<---------YAB1 --------->GT1  <------ZmHOX2a(1) <---------AHL20(2)   --------->AHL20(2)  --------->YAB1   tttgtgaataatttaagaggagcgtattcaatttattattttaagtgatttgtgtaaatttataaatcttatgttattcattataaattttaaaaattct  26519000                                              <---------YAB1                               <---------ARR11(3)                                              <---------MYB52(1)                 <---------YAB1                                            --------------->AGL15                <---------TOE2(3)                                --------->TOE1(3)                               <---------AHL20(2)                         --------->AHL20(2)<-----------------AGL3               --------->YAB1-------            <---------MYB46(3)  --------->TOE2(3)                      <---------TOE2(3)   --------->ARR11(1)         <---------ZAT6--------->AHL20(2)<-----------GT1       <---------YAB1   --------->AHL20(2)         <-----------RAV1(1) <-----------GT1<---------------AGL15 ------->TEIL<---------YAB1---------   aatgaaatctagtgttgttgaactaaaaaatataccttaaatttcactgttattggaaacagtttatgaatttgatgtttattaatattgaaagatttga  26519100                                                                      ---------->DOF2                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <---------AHL20(2)                   --------->AHL20(2)         ----                                <---------AHL20(2)                    <---------AHL20(2)      -------  --------->AHL20(2)   --------->GLK1(1)                        <-----------GT1         ------>ZmHOX2a(1) ---->GT1              <---------GLK1(1)                    <---------ARR11(3)         --------->TOE2(3) >CCA1(2)<---------ANAC55(2)    --------->AHL20(2)          --------->ARR11(3)     <----------DOF2   aaaaaaaaatcacttaaaaatacagaaatccaaattatatggttttagatgaaatttgaaaagattttacaataaatcacatcaactttcctaaaatcat  26519200                                                                                       <---------AHL20(2)                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(1)                                                                                   <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                             <------MYB46(1)                         --------->YAB1                           <---------YAB1  --------->AHL20(2)   --------->YAB1     --------->WOX13(1)                       <---------YAB1<------MYB83           - <---------ARR11(3)  <---------ICU4                          --------->YAB1  ----------->GT1    ----- ----->YAB1         <---------YAB1--------->MYB59           --------->ICU4  --------->MYB59 --------- -->YAB1            <---------ATHB12               ------>ZmHOX2a(1)   ----------->ARR10    <--------   caaaatcatataactaaaactcatcattcaaaatgtaaggtctaatacatctcctaaaatgaatgatgatgtttagatttggtattaattttttttaatt  26519300                                                     <---------ANAC58                                                     ----------->GT1                                                     <---------ANAC58                                                     <---------ANAC46         <---------YAB1                            --------->ZAT14    --------->YAB1                                 --------->ZAT18    <------ZmHOX2a(1)                              <---------ZAT14             ----------->GT1 --------->DOF2                                   --------->ALFIN1        --------->DAG2 ---->YAB1                                  ---------->DOF2          --------->At4g35610 >AHL20(2)            --------->DAG2--------->AHL20(2)              ----------->GT1 -AHL20(2)           ---------->DOF2<---------AHL20(2) ----------->GT1   ---------->DOF2           <-   agaaaaggataatgaatgagaaataaagtagggactaaaaaaatgaaaaagagtggagtgaaaatagggacagcaaaaagagagtgacaagagtagagtt  26519400  Previous    Next  AGI:  At1g70370.1    Description:  BURP domain-containing protein / polygalacturonase, putative. Identical to Probable polygalacturonase non-catalytic subunit JP650 precursor (JP650) [Arabidopsis Thaliana] (GB:P92990;GB:O64599;GB:Q8H7B8;GB:Q93ZQ4); similar to JP630, polygalacturonase [Arabidopsis thaliana] (TAIR:AT1G23760.1); similar to BURP domain-containing protein / polygalacturonase, putative [Arabidopsis thaliana] (TAIR:AT1G60390.1); similar to Polygalacturonase-1 non-catalytic subunit beta precursor (AroGP1) (Polygalacturonase converter) (PG converter) (GB:Q40161); similar to unnamed protein product [Vitis vinifera] (GB:CAO66055.1); similar to unnamed protein product [V Range:  from: 26516385    to: 26518851    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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