Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->At5g28300                                 <-----------HVH21                                --------->LBD16                                ----------->GT1                              <---------LBD16                            ------>MYB46(1)                            -------->P                            ------>MYB83                           --------->MYB55(1)                     <---------ANAC55(2)                     --------->ANAC55(2)                    --------------->AtSPL8           <---------YAB1  <---------ALFIN1         --------->YAB1   <---------MYB111(1)         ---------->DOF2  --------->MYB46(3)     <---------AHL20(2)   <---------MYB55(2)     --------->AHL20(2) ------->TEIL                              --------->ZAT18    --------->AHL20(2) <-----------GT1  --------->TOE1(2)        --------->ALFIN1             ------- --------->AHL20(2) <---------------AtSPL8  ---------->DOF2    --------->ALFIN1               <------ ------->TOE2(3) <---------GLK1(2)----------->HVH21           <------ZmHOX2a(1)   <---------GLK1(2) -   acattatttaataaagatagattatgtacccacccggtgaaacctagaaagaaaacgcgaacgaggagtggccaagagaagatagattgttctgttctgc  26462700                                                                                                -----                                                                                                -----                                                                                              <------                                                                                              -------            <---------YAB1                                                                    -------          --------->YAB1                                                                     --------         <---------YAB1                                                                   --------->WRKY38(1)        <---------ARR11(3)                                                                --------->WRKY12        --------->ARR11(3)                                                               --------->ALFIN1       --------->CCA1(1)         ---------->DOF2  <---------------AtSPL8                <-------MYC2       --------->RVE1(1)    <------ZmHOX2a(2)     <---------ICU4                        <-------MYC3   --------->AHL20(2)      <---------ARR11(3)     --------------->AtSPL8                ------->MYC3 -->HSFB2a(2)              --------->ARR11(3)  --------->ATHB12             --------->AHL20(2)------- ---HSFB2a(2)          ---------->DOF2       <---------WOX13(1)        --------->YAB1   ------->MYC2 -------->YAB1     --------->ANAC46       <---------YAB1              <---------YAB1  ------->TEIL   aagtataaaatatcatcatacaaaccaaagatcagaaaagaaccaagattgattagtactaacatatatactatgatataaaatactgaacgtggaccga  26462800                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                <---- ->MYB46(1)                                                                                     <---- ->MYB83------>ZmHOX2a(1)                                                       <------ZmHOX2a(1)<--- ---MYB59                                                                   ---------->DOF2     <---- -->DREB2C(2)                                <------ZmHOX2a(2)       ------->GAMYB             ------ ---->HVH21                                 --------->AGP1          <---------MYB52(2)        ------- ->DEAR3(2)                      >>>>>>>>>TBF1                      --------->MYB46(3)        <------ -->DEAR3(1)       ---------->DOF2  >>>>>>>>>TBF1---------->DOF2  --------->MYB52(1)         --------   cctctcattcctgtgaaataagaaagaaaatggaagaagaagaatagatccaaaagcgtttgtgtaaacaacgaacacaaaaggactcatccctcccgtc  26462900        --------->ANAC46     --------->ARR14(2)     <---------ARR14(2)    <---------MYB52(1) ------>GAMYB ------->DEAR3(1) ------->ANAC46 -----WRKY38(1)                                                       ------>MYB46(1) -----WRKY45                                            <---------------AGL15 ------DOF5.7(2)                                        --------------->AGL15            <---------ALFIN1 -----WRKY12         ---------->DOF2         ---------->DOF2          ------>MYB83       --------->REM1(1) --->DOF5.7(2)   --------->YAB1            <---------YAB1           <---------MYB111(1)<-----------HVH21 -->LBD16       <---------TOE2(3)<---------ANAC58      <-----------------AGL3         --------->TOE1(3) -----HVH21     <---------YAB1   <---------ANAC58      <-----------------AGL2         --------->TOE2(3) ->ANAC46    --------->ICU4 <---------ATHB12--------->YAB1 ---------->DOF2 <---------CCA1(2)   aacgccgttttcgccattatcgtaagagcaatcgtgcatgcttccattatagccattgctacaaagggtaccaactcatctcttctaaccttcacctcca  26463000                                            ------>ZmHOX2a(1)                             --------->ANAC46                             --------->ANAC58                                  <---------ANAC58                            --------->RAP2.6(3)     <---------TOE1(2)          <---------ANAC58                           --------->MYB52(1) <---------ZAT2      <---------AHL20(2)              <----------DOF2--------->ANAC58 --------->ZAT2      --------->AHL20(2) ---------->DOF2<   tctatctccctcttgtctttcaaataagaaaacggcacgatgtctcctagctccaaggatttagggaaataaatataagtagcgagagaaagagagaggt  26463100               <------------CBF             *TSS     ------>ZmHOX2a(2)              <------------CBF    <------ZmHOX2a(2)              --------->ATHB51   --------->AGP1                  --------->ATHB12   <---------ARR11(3)             <---------AHL20(2)   --------->ARR11(3)             <---------YAB1   <---------ARR14(3)          <---------ARR11(3)   --------->ARR14(3)          --------->ARR11(3)   --------->ARR14(2)         --------->YAB1              <-----------TBP                           <   <---------ARR14(2)        <---------YAB1<---------AHL20(2)                   --------->YAB1     --  <---------GLK1(1)        --------->CCA1(2)            --------->YAB1         <---------YAB1  <-----  --------->GLK1(1)       --------->ARR11(1)           <---------ATHB12     --------->ICU4<---------DAG2 ----------->ARR10        --------->ARR11(3)           ----------------->AGL3--------->YAB1   <------ ------ZmHOX2a(1)         <---------ARR11(3)         --------->YAB1      <------ZmHOX2a(1)<----------DOF2   aaggagatcttcaatgctattggagaaagatatgatattattggtttaatttctctaatcatatatagggagggaggaattatcatacattactttttta  26463200           <---------YAB1      <---------ARR11(3)                                              --------->REM1(1)  <--------HAHB4                                              <---------bZIP60(2)  <---------ICU4                                         <---------ANAC58                      <-----  --------->YAB1                                         <---------ANAC58                     ------- <---------YAB1                                  <---------DAG2   --------->At4g35610    <---------ZAT14 -----------GT1                 --------->ANAC46 <----------DOF2  <---------At4g35610    --------->ZAT18 ------->YAB1              <----------DOF2  <---------At4g35610  ------->TEIL            <---------ZAT18 ----AHL20(2)          <-----------GT1  --------->ALFIN1 --------->YAB1                  --------->ZAT14 ---AHL20(2)        --------->CCA1(2)  --------->At5g28300    <---------REM1(1)      <---------ALFIN1   tttatcattatctattattcagatataacctttcacgaagcggtgaagctactttacaagcgtgatgtagctacacgagtgactcccccattgcactaag  26463300           <-----------TGA1          --------->ANAC55(2)          --------->ANAC58          --------->ANAC58          <---------TGA2(1)          <---------ANAC55(2)          --------->ANAC46          <---------bZIP60(1)          --------->bZIP60(1)          --------->TGA2(1)         <-----------STF1         --------->SPL7     --------->HSFC1(2)                                                                         <----     --------->At4g35610                          --------->ALFIN1                             <-----     <---------HSFC1(2)                        --------->GLK1(2)                               ------    --------->GLK1(2)                         <---------GLK1(2)                            ---------- ----TOE2(3)                               --------->YAB1                                  ========== -->MYB52(1)     <---------AHL20(2) <-----------GT1                                   ----------->GT1   ggtgagaagcttacgtcattttttttttgttttttgtttcacatatcagaatgtgtgtgttcagacaaaaaatccaaatagtttgatgctgtttaaagat  26463400                          <---------ANAC58                          <---------ANAC46                      <----------DOF2                <---------bZIP60(1)                =================bZIP_DOF                <---------ANAC58                --------->bZIP60(1)                    --------->YAB1                    <---------DEAR3(2)                <---------bZIP60(2)                   <---------YAB1                 <---------ANAC58                <---------ANAC58                    --------->YAB1                   <---------TGA1a                <---------O2                       <---------AHL20(2)                --------->TGA1a                <---------TGA1a                    <---------YAB1                    <---------ANAC58                --------->O2                       --------->AHL20(2)               --------->SPL7 <---------AHL20(1)  <---------ANAC58           ------->TEIL                        <-------TEIL <---------AHL20(2)  <---------ANAC46        <---------ANAC55(2)                    ------->TEIL --------->AHL20(2)  <---------ANAC58        <---------ANAC46                     --------->TOE1(2) --ZmHOX2a(2)   <---------ANAC55(2)          ----------->GT1                      <---------SPL7 ---- ----ARR11(3)   --------->ANAC55(2)         <---------TOE2(3)                     --------->TOE2(2) --->ARR11(3) <-----------GT1              --------->MYB52(1)                    <---------HSFB2a(1) >DOF2 <---------TOE2(3)  <---------ANAC58 <---------DOF5.7(2)          --------->ATHB12<---------TOE1(2) =========================bZIP_DOF     --------->MYB59--------->ICU4   <---------YAB1<---------ANAC46   cattttatttatgtagttacgtcgcgtttcgtcttataagttagataacgtatataattataagttagagagcatgatttagaacgtacgtgggttctcc  26463500                            --------->ANAC58                            --------->ANAC46                            --------->ANAC58                           --------->SPL7                        --------->YAB1                       <---------YAB1                      --------->ARR11(3)                               <-----------GT1                      <---------ARR11(3)                               <---------AHL20(2)                     --------->YAB1                                 --------->MYB52(2)                    <---------YAB1                                <---------MYB52(1)                  --------->YAB1                                 --------->TOE2(3)           <-------                  <---------ICU4                                --------->ANAC55(2)          <-------                  -------->HAHB4                                --------->ANAC46      --------->YAB1                 --------->ICU4 ------>NtERF2               --------->AtMYB61     <---------AHL20(2) -->ZmHOX2a(1)   <---------ATHB51                       <---------ETT(2)         --------->AHL20(2)<-   taatacatagtcagacttaattatgatcatacgccaactaaatcagcgagagtaaatgtagaccatacgttatttacttcaaattttatcgtaaactttt  26463600  Previous    Next  AGI:  At1g70260.1    Description:  nodulin MtN21 family protein. similar to nodulin-related [Arabidopsis thaliana] (TAIR:AT1G60050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71720.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 26460507    to: 26463113    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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